RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 GYG1P46976 350 aa27.84■■■□□ 2.05
SF1-220ENST00000626028 ATG9AQ7Z3C6 839 aa27.84■■■□□ 2.05
SF1-220ENST00000626028 CLUAP1Q96AJ1 413 aa27.84■■■□□ 2.05
SF1-220ENST00000626028 FMR1Q06787 632 aaKnown RBP eCLIP27.83■■■□□ 2.051e-11■□□□□ 9.6
SF1-220ENST00000626028 ANGEL2Q5VTE6 544 aaKnown RBP27.83■■■□□ 2.05
SF1-220ENST00000626028 KIAA0825Q8IV33 1275 aa27.83■■■□□ 2.05
SF1-220ENST00000626028 FTSJ3Q8IY81 847 aaKnown RBP27.83■■■□□ 2.05
SF1-220ENST00000626028 MTMR14Q8NCE2 650 aa27.83■■■□□ 2.05
SF1-220ENST00000626028 THSD7BQ9C0I4 1608 aa27.82■■■□□ 2.04
SF1-220ENST00000626028 WNT10BO00744 389 aa27.82■■■□□ 2.04
SF1-220ENST00000626028 ECE1P42892 770 aa27.82■■■□□ 2.04
SF1-220ENST00000626028 SAPCD2Q86UD0 394 aa27.82■■■□□ 2.04
SF1-220ENST00000626028 DZIP1LQ8IYY4 767 aaKnown RBP27.82■■■□□ 2.04
SF1-220ENST00000626028 CERS5Q8N5B7 392 aa27.82■■■□□ 2.04
SF1-220ENST00000626028 TMEM57Q8N5G2 664 aa27.82■■■□□ 2.04
SF1-220ENST00000626028 LPIN2Q92539 896 aa27.82■■■□□ 2.04
SF1-220ENST00000626028 CEP126Q9P2H0 1117 aa27.82■■■□□ 2.04
SF1-220ENST00000626028 SLC5A1P13866 664 aa27.81■■■□□ 2.04
SF1-220ENST00000626028 SRGAP3O43295 1099 aa27.8■■■□□ 2.04
SF1-220ENST00000626028 MS4A1P11836 297 aa27.8■■■□□ 2.04
SF1-220ENST00000626028 VEGFBP49765 207 aa27.8■■■□□ 2.04
SF1-220ENST00000626028 TBC1D22AQ8WUA7 517 aa27.8■■■□□ 2.04
SF1-220ENST00000626028 ZBED3Q96IU2 234 aaPredicted RBP27.8■■■□□ 2.04
SF1-220ENST00000626028 TNNQ9UQP3 1299 aa27.8■■■□□ 2.04
SF1-220ENST00000626028 NBPF9Q3BBW0 867 aa27.79■■■□□ 2.04
SF1-220ENST00000626028 MFSD14BQ5SR56 506 aa27.79■■■□□ 2.04
SF1-220ENST00000626028 ASTN2O75129 1339 aaPredicted RBP27.78■■■□□ 2.04
SF1-220ENST00000626028 WDR33Q9C0J8 1336 aaKnown RBP27.78■■■□□ 2.04
SF1-220ENST00000626028 ADM5C9JUS6 153 aa27.78■■■□□ 2.04
SF1-220ENST00000626028 ZBTB22O15209 634 aa27.78■■■□□ 2.04
SF1-220ENST00000626028 SIL1Q9H173 461 aa27.78■■■□□ 2.04
SF1-220ENST00000626028 ZNF408Q9H9D4 720 aa27.78■■■□□ 2.04
SF1-220ENST00000626028 COL1A1P02452 1464 aaPredicted RBP27.77■■■□□ 2.04
SF1-220ENST00000626028 DLGAP5Q15398 846 aa27.77■■■□□ 2.04
SF1-220ENST00000626028 APOBEC3FQ8IUX4 373 aaKnown RBP27.77■■■□□ 2.04
SF1-220ENST00000626028 PAPPA2Q9BXP8 1791 aa27.76■■■□□ 2.03
SF1-220ENST00000626028 FKBP1BP68106 108 aa27.76■■■□□ 2.03
SF1-220ENST00000626028 ATP2B3Q16720 1220 aa27.76■■■□□ 2.03
SF1-220ENST00000626028 C2orf69Q8N8R5 385 aa27.76■■■□□ 2.03
SF1-220ENST00000626028 SUGT1Q9Y2Z0 365 aa27.76■■■□□ 2.03
SF1-220ENST00000626028 MYO1BO43795 1136 aa27.75■■■□□ 2.03
SF1-220ENST00000626028 FRAT2O75474 233 aaPredicted RBP27.75■■■□□ 2.03
SF1-220ENST00000626028 CDCA5Q96FF9 252 aa27.75■■■□□ 2.03
SF1-220ENST00000626028 GBA2Q9HCG7 927 aaPredicted RBP27.75■■■□□ 2.03
SF1-220ENST00000626028 SERPINA10Q9UK55 444 aa27.75■■■□□ 2.03
SF1-220ENST00000626028 BCAMP50895 628 aa27.74■■■□□ 2.03
SF1-220ENST00000626028 CAPNS2Q96L46 248 aa27.74■■■□□ 2.03
SF1-220ENST00000626028 PA2G4Q9UQ80 394 aaKnown RBP27.74■■■□□ 2.03
SF1-220ENST00000626028 HDLBPQ00341 1268 aaKnown RBP27.73■■■□□ 2.03
SF1-220ENST00000626028 ITPRIPQ8IWB1 547 aa27.73■■■□□ 2.03
SF1-220ENST00000626028 AKAP2Q9Y2D5 859 aa27.73■■■□□ 2.03
SF1-220ENST00000626028 SPDYE2BA6NHP3 402 aa27.72■■■□□ 2.03
SF1-220ENST00000626028 ZBTB7BO15156 539 aaPredicted RBP27.72■■■□□ 2.03
SF1-220ENST00000626028 SPDYE6P0CI01 402 aa27.72■■■□□ 2.03
SF1-220ENST00000626028 MAP2K2P36507 400 aa27.72■■■□□ 2.03
SF1-220ENST00000626028 MAP2K1Q02750 393 aaPredicted RBP27.72■■■□□ 2.03
SF1-220ENST00000626028 MRIQ9BWK5 157 aa27.72■■■□□ 2.03
SF1-220ENST00000626028 GNL3LQ9NVN8 582 aaKnown RBP27.72■■■□□ 2.03
SF1-220ENST00000626028 SEMA3EO15041 775 aa27.71■■■□□ 2.03
SF1-220ENST00000626028 HSPA1AP0DMV8 641 aaKnown RBP27.71■■■□□ 2.03
SF1-220ENST00000626028 HSPA1BP0DMV9 641 aaKnown RBP27.71■■■□□ 2.03
SF1-220ENST00000626028 RLBP1P12271 317 aa27.71■■■□□ 2.03
SF1-220ENST00000626028 CFAP100Q494V2 611 aa27.71■■■□□ 2.03
SF1-220ENST00000626028 WDR66Q8TBY9 1149 aa27.71■■■□□ 2.03
SF1-220ENST00000626028 TTF2Q9UNY4 1162 aaKnown RBP27.71■■■□□ 2.03
SF1-220ENST00000626028 PPP2R3BQ9Y5P8 575 aa27.71■■■□□ 2.03
SF1-220ENST00000626028 MAST3O60307 1309 aa27.7■■■□□ 2.03
SF1-220ENST00000626028 F8W031 263 aaPredicted RBP27.7■■■□□ 2.02
SF1-220ENST00000626028 HUNKP57058 714 aa27.7■■■□□ 2.02
SF1-220ENST00000626028 RCAN3Q9UKA8 241 aa27.7■■■□□ 2.02
SF1-220ENST00000626028 JAG2Q9Y219 1238 aa27.7■■■□□ 2.02
SF1-220ENST00000626028 NF2P35240 595 aa27.69■■■□□ 2.02
SF1-220ENST00000626028 CYP4F22Q6NT55 531 aa27.69■■■□□ 2.02
SF1-220ENST00000626028 DLK2Q6UY11 383 aa27.69■■■□□ 2.02
SF1-220ENST00000626028 PAXIP1Q6ZW49 1069 aaPredicted RBP27.69■■■□□ 2.02
SF1-220ENST00000626028 IQSEC3Q9UPP2 1182 aaPredicted RBP27.69■■■□□ 2.02
SF1-220ENST00000626028 PNMA6EA0A0J9YXQ4 647 aa27.68■■■□□ 2.02
SF1-220ENST00000626028 ATP8B2P98198 1209 aa27.68■■■□□ 2.02
SF1-220ENST00000626028 POLA2Q14181 598 aa27.68■■■□□ 2.02
SF1-220ENST00000626028 SSH3Q8TE77 659 aa27.68■■■□□ 2.02
SF1-220ENST00000626028 CHAF1AQ13111 956 aaPredicted RBP27.67■■■□□ 2.02
SF1-220ENST00000626028 CCDC102AQ96A19 550 aa27.67■■■□□ 2.02
SF1-220ENST00000626028 PRMT6Q96LA8 375 aaPredicted RBP27.67■■■□□ 2.02
SF1-220ENST00000626028 WBP1LQ9NX94 342 aa27.67■■■□□ 2.02
SF1-220ENST00000626028 RBM5P52756 815 aaKnown RBP eCLIP27.66■■■□□ 2.02
SF1-220ENST00000626028 NOGQ13253 232 aa27.66■■■□□ 2.02
SF1-220ENST00000626028 G3BP1Q13283 466 aaKnown RBP eCLIP27.66■■■□□ 2.02
SF1-220ENST00000626028 PDS5AQ29RF7 1337 aaKnown RBP27.66■■■□□ 2.02
SF1-220ENST00000626028 RGMBQ6NW40 437 aa27.65■■■□□ 2.02
SF1-220ENST00000626028 AIDAQ96BJ3 306 aa27.65■■■□□ 2.02
SF1-220ENST00000626028 CHMP4BQ9H444 224 aaKnown RBP27.65■■■□□ 2.02
SF1-220ENST00000626028 DENND2AQ9ULE3 1009 aa27.65■■■□□ 2.02
SF1-220ENST00000626028 SALL1Q9NSC2 1324 aa27.65■■■□□ 2.02
SF1-220ENST00000626028 CRKP46108 304 aa27.64■■■□□ 2.02
SF1-220ENST00000626028 TFCP2Q12800 502 aa27.64■■■□□ 2.02
SF1-220ENST00000626028 TNFAIP1Q13829 316 aa27.64■■■□□ 2.02
SF1-220ENST00000626028 MVPQ14764 893 aaKnown RBP27.64■■■□□ 2.02
SF1-220ENST00000626028 TEKT1Q969V4 418 aa27.64■■■□□ 2.02
SF1-220ENST00000626028 DEFB129Q9H1M3 183 aa27.64■■■□□ 2.02
SF1-220ENST00000626028 AKAP11Q9UKA4 1901 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms