RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 ARID3CA6NKF2 412 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 TNFRSF21O75509 655 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 ACPPP15309 386 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 PREPP48147 710 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 GIMAP7Q8NHV1 300 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 NXPE3Q969Y0 559 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 ZKSCAN3Q9BRR0 538 aa8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 SOX17Q9H6I2 414 aaPredicted RBP8.91□□□□□ -0.98
AC004943.3-201ENST00000624116 A6NHS1 94 aa8.9□□□□□ -0.98
AC004943.3-201ENST00000624116 TMEM88BA6NKF7 163 aa8.9□□□□□ -0.98
AC004943.3-201ENST00000624116 IRAK1P51617 712 aa8.9□□□□□ -0.98
AC004943.3-201ENST00000624116 NUTM2GQ5VZR2 741 aa8.9□□□□□ -0.98
AC004943.3-201ENST00000624116 CYP4F12Q9HCS2 524 aa8.9□□□□□ -0.98
AC004943.3-201ENST00000624116 COL17A1Q9UMD9 1497 aaPredicted RBP8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 KRTAP9-6A0A140TA67 174 aa8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 PAX4O43316 350 aa8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 HHIPQ96QV1 700 aa8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 BHLHE41Q9C0J9 482 aaPredicted RBP8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 AMOTL2Q9Y2J4 779 aa8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.89□□□□□ -0.99
AC004943.3-201ENST00000624116 EREGO14944 169 aa8.88□□□□□ -0.99
AC004943.3-201ENST00000624116 GP2P55259 537 aaKnown RBP8.88□□□□□ -0.99
AC004943.3-201ENST00000624116 MTMR3Q13615 1198 aa8.88□□□□□ -0.99
AC004943.3-201ENST00000624116 CCDC82Q8N4S0 544 aa8.88□□□□□ -0.99
AC004943.3-201ENST00000624116 SUGCTQ9HAC7 445 aa8.88□□□□□ -0.99
AC004943.3-201ENST00000624116 TRPA1O75762 1119 aa8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 MED26O95402 600 aa8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 FKBP4Q02790 459 aaKnown RBP eCLIP8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 VN1R5Q7Z5H4 357 aa8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 ASAP3Q8TDY4 903 aa8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 USP26Q9BXU7 913 aa8.87□□□□□ -0.99
AC004943.3-201ENST00000624116 SOX1O00570 391 aaPredicted RBP8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 SPINK2P20155 84 aa8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 CPSF6Q16630 551 aaKnown RBP eCLIP8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 DTX1Q86Y01 620 aa8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 SMG8Q8ND04 991 aaKnown RBP8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 SHKBP1Q8TBC3 707 aa8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 TMPRSS13Q9BYE2 586 aa8.86□□□□□ -0.99
AC004943.3-201ENST00000624116 PRR19A6NJB7 356 aa8.85□□□□□ -0.99
AC004943.3-201ENST00000624116 MAP4P27816 1152 aaKnown RBP8.85□□□□□ -0.99
AC004943.3-201ENST00000624116 B4GALNT3Q6L9W6 998 aa8.85□□□□□ -0.99
AC004943.3-201ENST00000624116 GJD3Q8N144 294 aa8.85□□□□□ -0.99
AC004943.3-201ENST00000624116 C12orf50Q8NA57 414 aaPredicted RBP8.85□□□□□ -0.99
AC004943.3-201ENST00000624116 LOC100289279A0A1B0GTE1 492 aa8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 WNT11O96014 354 aa8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 RXRBP28702 533 aa8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 HP1BP3Q5SSJ5 553 aaPredicted RBP8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 YIPF2Q9BWQ6 316 aa8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 ATG3Q9NT62 314 aa8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 FOXD3Q9UJU5 478 aaPredicted RBP8.84□□□□□ -0.99
AC004943.3-201ENST00000624116 FZD6O60353 706 aa8.83□□□□□ -1
AC004943.3-201ENST00000624116 ABL1P00519 1130 aa8.83□□□□□ -1
AC004943.3-201ENST00000624116 ESRRAP11474 423 aaPredicted RBP8.83□□□□□ -1
AC004943.3-201ENST00000624116 EXOSC6Q5RKV6 272 aaKnown RBP8.83□□□□□ -1
AC004943.3-201ENST00000624116 ZFYVE1Q9HBF4 777 aa8.83□□□□□ -1
AC004943.3-201ENST00000624116 PIM2Q9P1W9 311 aa8.83□□□□□ -1
AC004943.3-201ENST00000624116 OAS3Q9Y6K5 1087 aaKnown RBP8.83□□□□□ -1
AC004943.3-201ENST00000624116 WDR64B1ANS9 1081 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 TIAF1O95411 115 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 TXKP42681 527 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 USP11P51784 963 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 SGO2Q562F6 1265 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 MFSD14AQ96MC6 490 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 KRTAP4-12Q9BQ66 201 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 METTL22Q9BUU2 404 aaPredicted RBP8.82□□□□□ -1
AC004943.3-201ENST00000624116 ZFYVE28Q9HCC9 887 aa8.82□□□□□ -1
AC004943.3-201ENST00000624116 NEFLP07196 543 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 GSTM4Q03013 218 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 PEAR1Q5VY43 1037 aaPredicted RBP8.81□□□□□ -1
AC004943.3-201ENST00000624116 HGSNATQ68CP4 663 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 PAOXQ6QHF9 649 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 DDX54Q8TDD1 881 aaKnown RBP8.81□□□□□ -1
AC004943.3-201ENST00000624116 GOLGA2P5Q9HBQ8 144 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 EGFL7Q9UHF1 273 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 LEMD3Q9Y2U8 911 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 GTF3C3Q9Y5Q9 886 aa8.81□□□□□ -1
AC004943.3-201ENST00000624116 FAM95CA0A1B0GW59 222 aa8.8□□□□□ -1
AC004943.3-201ENST00000624116 OSBPL1AQ9BXW6 950 aa8.8□□□□□ -1
AC004943.3-201ENST00000624116 CLEC4MQ9H2X3 399 aaPredicted RBP8.8□□□□□ -1
AC004943.3-201ENST00000624116 CYP11A1P05108 521 aa8.79□□□□□ -1
AC004943.3-201ENST00000624116 PHLDB3Q6NSJ2 640 aa8.79□□□□□ -1
AC004943.3-201ENST00000624116 ANGEL1Q9UNK9 670 aaKnown RBP8.79□□□□□ -1
AC004943.3-201ENST00000624116 USTQ9Y2C2 406 aa8.79□□□□□ -1
AC004943.3-201ENST00000624116 ZNF211Q13398 564 aaPredicted RBP8.78□□□□□ -1
AC004943.3-201ENST00000624116 LCE3BQ5TA77 95 aa8.78□□□□□ -1
AC004943.3-201ENST00000624116 GALNT12Q8IXK2 581 aa8.78□□□□□ -1
AC004943.3-201ENST00000624116 LATS2Q9NRM7 1088 aa8.78□□□□□ -1
AC004943.3-201ENST00000624116 CCDC87Q9NVE4 849 aa8.78□□□□□ -1
AC004943.3-201ENST00000624116 A0A096LPE4 126 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 A0A1W2PPZ6 126 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 TAL1P17542 331 aaPredicted RBP8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 SOX4Q06945 474 aaPredicted RBP8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 PCDH1Q08174 1060 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 NFKBIBQ15653 356 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 KRTAP1-3Q8IUG1 177 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 CCNJLQ8IV13 435 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 FBXL6Q8N531 539 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 FMNL2Q96PY5 1086 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 LIN7BQ9HAP6 207 aa8.77□□□□□ -1.01
AC004943.3-201ENST00000624116 BRPF3Q9ULD4 1205 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms