RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 A0A1W2PRU2 124 aa7.01□□□□□ -1.29
SRSF4-207ENST00000622143 RNF144AP50876 292 aaPredicted RBP7.01□□□□□ -1.29
SRSF4-207ENST00000622143 CCDC155Q8N6L0 562 aa7.01□□□□□ -1.29
SRSF4-207ENST00000622143 MKRN1Q9UHC7 482 aaKnown RBP7.01□□□□□ -1.29
SRSF4-207ENST00000622143 NOD1Q9Y239 953 aa7.01□□□□□ -1.29
SRSF4-207ENST00000622143 USP54Q70EL1 1684 aa7□□□□□ -1.29
SRSF4-207ENST00000622143 USP47Q96K76 1375 aa7□□□□□ -1.29
SRSF4-207ENST00000622143 A0A0G2JLW4 131 aa7□□□□□ -1.29
SRSF4-207ENST00000622143 LZTS3O60299 673 aaPredicted RBP7□□□□□ -1.29
SRSF4-207ENST00000622143 C9orf131Q5VYM1 1079 aa7□□□□□ -1.29
SRSF4-207ENST00000622143 NME9Q86XW9 330 aa7□□□□□ -1.29
SRSF4-207ENST00000622143 NANOS1Q8WY41 292 aaKnown RBP7□□□□□ -1.29
SRSF4-207ENST00000622143 NLRP3Q96P20 1036 aa7□□□□□ -1.29
SRSF4-207ENST00000622143 VRTNQ9H8Y1 702 aa7□□□□□ -1.29
SRSF4-207ENST00000622143 RRAGCQ9HB90 399 aa7□□□□□ -1.29
SRSF4-207ENST00000622143 TOGARAM1Q9Y4F4 1720 aa7□□□□□ -1.29
SRSF4-207ENST00000622143 CICQ96RK0 1608 aaPredicted RBP7□□□□□ -1.29
SRSF4-207ENST00000622143 GTF2IP78347 998 aa6.99□□□□□ -1.29
SRSF4-207ENST00000622143 CLDN10P78369 228 aa6.99□□□□□ -1.29
SRSF4-207ENST00000622143 USP4Q13107 963 aa6.99□□□□□ -1.29
SRSF4-207ENST00000622143 CRTC2Q53ET0 693 aaPredicted RBP6.99□□□□□ -1.29
SRSF4-207ENST00000622143 TRIM50Q86XT4 487 aa6.99□□□□□ -1.29
SRSF4-207ENST00000622143 GPR161Q8N6U8 529 aaKnown RBP6.99□□□□□ -1.29
SRSF4-207ENST00000622143 USHBP1Q8N6Y0 703 aa6.99□□□□□ -1.29
SRSF4-207ENST00000622143 ZNF594Q96JF6 807 aaPredicted RBP6.99□□□□□ -1.29
SRSF4-207ENST00000622143 ARHGEF10LQ9HCE6 1279 aa6.99□□□□□ -1.29
SRSF4-207ENST00000622143 PXDNLA1KZ92 1463 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 KTN1Q86UP2 1357 aaKnown RBP6.98□□□□□ -1.29
SRSF4-207ENST00000622143 MEGF6O75095 1541 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L15C9J2P7 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L10C9JJH3 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L13C9JLJ4 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L12C9JPN9 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L11C9JVI0 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L21D6R901 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L18D6R9N7 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L22D6RA61 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L17D6RBQ6 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L19D6RCP7 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L20D6RJB6 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 RASA1P20936 1047 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 GPC1P35052 558 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 KRT76Q01546 638 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 USP17L24Q0WX57 530 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 CLN3Q13286 438 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 OGFOD1Q8N543 542 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 RAB6BQ9NRW1 208 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 DNAAF2Q9NVR5 837 aaKnown RBP6.98□□□□□ -1.29
SRSF4-207ENST00000622143 KIAA1024Q9UPX6 916 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 C4BP0C0L5 1744 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 KIAA1551Q9HCM1 1747 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 KIAA1210Q9ULL0 1709 aa6.98□□□□□ -1.29
SRSF4-207ENST00000622143 RGPD2P0DJD1 1756 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 PALLDQ8WX93 1383 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 DPEP1P16444 411 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 ITGA6P23229 1130 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 MPRIPQ6WCQ1 1025 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 LYSMD3Q7Z3D4 306 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 PKD1L3Q7Z443 1732 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 GRIP2Q9C0E4 1043 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 RNF181Q9P0P0 153 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 HRH3Q9Y5N1 445 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 TAF1LQ8IZX4 1826 aa6.97□□□□□ -1.29
SRSF4-207ENST00000622143 STAU1O95793 577 aaKnown RBP6.96□□□□□ -1.3
SRSF4-207ENST00000622143 IL2RAP01589 272 aa6.96□□□□□ -1.3
SRSF4-207ENST00000622143 MMP10P09238 476 aa6.96□□□□□ -1.3
SRSF4-207ENST00000622143 FBLN1P23142 703 aa6.96□□□□□ -1.3
SRSF4-207ENST00000622143 GTF2E1P29083 439 aaPredicted RBP6.96□□□□□ -1.3
SRSF4-207ENST00000622143 ATP1A2P50993 1020 aa6.96□□□□□ -1.3
SRSF4-207ENST00000622143 FSTL1Q12841 308 aa6.96□□□□□ -1.3
SRSF4-207ENST00000622143 TPCN2Q8NHX9 752 aa6.96□□□□□ -1.3
SRSF4-207ENST00000622143 ZCRB1Q8TBF4 217 aaKnown RBP6.96□□□□□ -1.3
SRSF4-207ENST00000622143 PCDHGA11Q9Y5H2 935 aa6.96□□□□□ -1.3
SRSF4-207ENST00000622143 TTC21AQ8NDW8 1320 aa6.96□□□□□ -1.3
SRSF4-207ENST00000622143 RAB3GAP2Q9H2M9 1393 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 PCNTO95613 3336 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 FAM196BA6NMK8 535 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 GNRH1P01148 92 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 PTK7Q13308 1070 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 PRICKLE2Q7Z3G6 844 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 LINC00116Q8NCU8 138 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 SMC1BQ8NDV3 1235 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 CUEDC1Q9NWM3 386 aaPredicted RBP6.95□□□□□ -1.3
SRSF4-207ENST00000622143 NOVA2Q9UNW9 492 aaKnown RBP6.95□□□□□ -1.3
SRSF4-207ENST00000622143 FAM208AQ9UK61 1670 aaKnown RBP6.95□□□□□ -1.3
SRSF4-207ENST00000622143 UBR3Q6ZT12 1888 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 MON2Q7Z3U7 1717 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 EVC2Q86UK5 1308 aa6.95□□□□□ -1.3
SRSF4-207ENST00000622143 FOXN1O15353 648 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 ATG7O95352 703 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 RHOQP17081 205 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 RASSF7Q02833 373 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 RETREG2Q8NC44 543 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 FLAD1Q8NFF5 587 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 TMC1Q8TDI8 760 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 STK32AQ8WU08 396 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 KRTAP9-9Q9BYP9 154 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 KRTAP9-4Q9BYQ2 154 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 ZMIZ1Q9ULJ6 1067 aa6.94□□□□□ -1.3
SRSF4-207ENST00000622143 KDM2BQ8NHM5 1336 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms