RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 USP28Q96RU2 1077 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 FTOQ9C0B1 505 aaKnown RBP eCLIP3.82□□□□□ -1.8
U1.39-201ENST00000621562 SCAND2PQ9GZW5 306 aaPredicted RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 ZBTB3Q9H5J0 574 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 GPHNQ9NQX3 736 aaPredicted RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 DACT1Q9NYF0 836 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 FBXO3Q9UK99 471 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 RCOR1Q9UKL0 485 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 WDR81Q562E7 1941 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 LTBP1Q14766 1721 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 THSD7AQ9UPZ6 1657 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 ZMYM6O95789 1325 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 MAP3K15Q6ZN16 1313 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 WDR19Q8NEZ3 1342 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 TCRBV5S4A2TA0A5A2 114 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 KIF28PB7ZC32 967 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 HMGB1P09429 215 aaKnown RBP3.81□□□□□ -1.8
U1.39-201ENST00000621562 IFIT1P09914 478 aaKnown RBP3.81□□□□□ -1.8
U1.39-201ENST00000621562 CSB-PGBD3P0DP91 1061 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 PDIA3P30101 505 aaKnown RBP3.81□□□□□ -1.8
U1.39-201ENST00000621562 TIMM10P62072 90 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 HMGN5P82970 282 aaKnown RBP3.81□□□□□ -1.8
U1.39-201ENST00000621562 TCIRG1Q13488 830 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 HSP90AA2PQ14568 343 aaPredicted RBP3.81□□□□□ -1.8
U1.39-201ENST00000621562 NOLC1Q14978 699 aaKnown RBP eCLIP3.81□□□□□ -1.8
U1.39-201ENST00000621562 CCDC144BQ3MJ40 725 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 PI16Q6UXB8 463 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.81□□□□□ -1.8
U1.39-201ENST00000621562 LUZP1Q86V48 1076 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 TBC1D10CQ8IV04 446 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 CCDC144CPQ8IYA2 1237 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 CKAP2LQ8IYA6 745 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 VSIG10Q8N0Z9 540 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 DDX11Q96FC9 970 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 ZNF274Q96GC6 653 aaPredicted RBP3.81□□□□□ -1.8
U1.39-201ENST00000621562 DNAJC25Q9H1X3 360 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 ZSCAN16Q9H4T2 348 aaPredicted RBP3.81□□□□□ -1.8
U1.39-201ENST00000621562 NCOA5Q9HCD5 579 aaKnown RBP3.81□□□□□ -1.8
U1.39-201ENST00000621562 TFIP11Q9UBB9 837 aaKnown RBP3.81□□□□□ -1.8
U1.39-201ENST00000621562 TACC3Q9Y6A5 838 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 ANKRD31Q8N7Z5 1873 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 SIPA1L1O43166 1804 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 QSER1Q2KHR3 1735 aa3.81□□□□□ -1.8
U1.39-201ENST00000621562 SMCHD1A6NHR9 2005 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 RTL9Q8NET4 1388 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 UBN2Q6ZU65 1347 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 A0A087WWV3 80 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 FAM237AA0A1B0GTK4 181 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 CTIFO43310 598 aaKnown RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 PTMAP06454 111 aaKnown RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 IL2RBP14784 551 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 FGFR2P21802 821 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 PTGS1P23219 599 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 ARID4AP29374 1257 aaPredicted RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 ADD2P35612 726 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 MCAMP43121 646 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 ZAP70P43403 619 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 KIF23Q02241 960 aaPredicted RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 FAM160A1Q05DH4 1040 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 LRMPQ12912 555 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 CAMK4Q16566 473 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 STX1AQ16623 288 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 AXDND1Q5T1B0 1012 aaPredicted RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 ATL3Q6DD88 541 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 GIGYF2Q6Y7W6 1299 aaKnown RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 NLRP10Q86W26 655 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 DHX40Q8IX18 779 aaKnown RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 DNAJC10Q8IXB1 793 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 FMR1NBQ8N0W7 255 aaPredicted RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 SYNE4Q8N205 404 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 RGS22Q8NE09 1264 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 PIGBQ92521 554 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 TSC1Q92574 1164 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 APPBP2Q92624 585 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 XAGE2Q96GT9 111 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 ZNF512BQ96KM6 892 aaPredicted RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 PRIMPOLQ96LW4 560 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 PUS7LQ9H0K6 701 aaKnown RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 PDCL3Q9H2J4 239 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 TNMDQ9H2S6 317 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 EPB41L4AQ9HCS5 686 aaPredicted RBP3.8□□□□□ -1.8
U1.39-201ENST00000621562 PRDM11Q9NQV5 511 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 RTEL1Q9NZ71 1219 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 NRBP1Q9UHY1 535 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 DENND2AQ9ULE3 1009 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 RIPOR2Q9Y4F9 1068 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 ADAMTSL1Q8N6G6 1762 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 LTBP4Q8N2S1 1624 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 MYH11P35749 1972 aa3.8□□□□□ -1.8
U1.39-201ENST00000621562 PSME4Q14997 1843 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 RBBP6Q7Z6E9 1792 aaKnown RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 ZNF335Q9H4Z2 1342 aaPredicted RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 A0A1W2PQ27 194 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 A0A1W2PQ64 194 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 A0A1W2PQD8 194 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 SH2B2O14492 632 aaPredicted RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 GPAA1O43292 621 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 PRC1O43663 620 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 RANBP6O60518 1105 aaKnown RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 YEATS4O95619 227 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms