RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 MAP3K12Q12852 859 aa11.78□□□□□ -0.52
VTA1-205ENST00000620996 STOX1Q6ZVD7 989 aa11.78□□□□□ -0.52
VTA1-205ENST00000620996 STK11IPQ8N1F8 1099 aa11.78□□□□□ -0.52
VTA1-205ENST00000620996 THSD7AQ9UPZ6 1657 aa11.78□□□□□ -0.52
VTA1-205ENST00000620996 PPFIA3O75145 1194 aa11.78□□□□□ -0.52
VTA1-205ENST00000620996 CNBD1Q8NA66 436 aa11.78□□□□□ -0.52
VTA1-205ENST00000620996 CTNNA3Q9UI47 895 aa11.78□□□□□ -0.52
VTA1-205ENST00000620996 WDR33Q9C0J8 1336 aaKnown RBP11.77□□□□□ -0.52
VTA1-205ENST00000620996 E7EWF7 191 aa11.77□□□□□ -0.52
VTA1-205ENST00000620996 PTMSP20962 102 aa11.77□□□□□ -0.52
VTA1-205ENST00000620996 ARID4AP29374 1257 aaPredicted RBP11.77□□□□□ -0.52
VTA1-205ENST00000620996 ADD2P35612 726 aa11.77□□□□□ -0.52
VTA1-205ENST00000620996 CAVIN4Q5BKX8 364 aa11.77□□□□□ -0.52
VTA1-205ENST00000620996 GDPD2Q9HCC8 539 aa11.77□□□□□ -0.52
VTA1-205ENST00000620996 RAI14Q9P0K7 980 aa11.77□□□□□ -0.52
VTA1-205ENST00000620996 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.52
VTA1-205ENST00000620996 RPS8P62241 208 aaKnown RBP11.77□□□□□ -0.53
VTA1-205ENST00000620996 TOB2Q14106 344 aaPredicted RBP11.77□□□□□ -0.53
VTA1-205ENST00000620996 GNL3LQ9NVN8 582 aaKnown RBP11.77□□□□□ -0.53
VTA1-205ENST00000620996 TFCP2L1Q9NZI6 479 aa11.77□□□□□ -0.53
VTA1-205ENST00000620996 JAG2Q9Y219 1238 aa11.77□□□□□ -0.53
VTA1-205ENST00000620996 ZNF213O14771 459 aa11.77□□□□□ -0.53
VTA1-205ENST00000620996 RRP9O43818 475 aaKnown RBP11.77□□□□□ -0.53
VTA1-205ENST00000620996 BRD1O95696 1058 aa11.77□□□□□ -0.53
VTA1-205ENST00000620996 FGAP02671 866 aa11.77□□□□□ -0.53
VTA1-205ENST00000620996 CHAF1AQ13111 956 aaPredicted RBP11.77□□□□□ -0.53
VTA1-205ENST00000620996 NFIXQ14938 502 aa11.77□□□□□ -0.53
VTA1-205ENST00000620996 SF3B3Q15393 1217 aaKnown RBP11.77□□□□□ -0.53
VTA1-205ENST00000620996 RALYLQ86SE5 291 aaKnown RBP11.77□□□□□ -0.53
VTA1-205ENST00000620996 MIGA1Q8NAN2 632 aa11.77□□□□□ -0.53
VTA1-205ENST00000620996 MINPP1Q9UNW1 487 aa11.77□□□□□ -0.53
VTA1-205ENST00000620996 STX6O43752 255 aa11.76□□□□□ -0.53
VTA1-205ENST00000620996 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
VTA1-205ENST00000620996 SYT1P21579 422 aa11.76□□□□□ -0.53
VTA1-205ENST00000620996 DDX11Q96FC9 970 aa11.76□□□□□ -0.53
VTA1-205ENST00000620996 NHSQ6T4R5 1651 aa11.76□□□□□ -0.53
VTA1-205ENST00000620996 SPEF2Q9C093 1822 aa11.76□□□□□ -0.53
VTA1-205ENST00000620996 MBD4O95243 580 aa11.76□□□□□ -0.53
VTA1-205ENST00000620996 APOBRQ0VD83 1088 aa11.76□□□□□ -0.53
VTA1-205ENST00000620996 SKOR2Q2VWA4 1001 aaPredicted RBP11.76□□□□□ -0.53
VTA1-205ENST00000620996 ARMT1Q9H993 441 aa11.76□□□□□ -0.53
VTA1-205ENST00000620996 TOMM22Q9NS69 142 aa11.76□□□□□ -0.53
VTA1-205ENST00000620996 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
VTA1-205ENST00000620996 ANKIB1Q9P2G1 1089 aa11.76□□□□□ -0.53
VTA1-205ENST00000620996 CCT2P78371 535 aaKnown RBP11.75□□□□□ -0.53
VTA1-205ENST00000620996 PAXIP1Q6ZW49 1069 aaPredicted RBP11.75□□□□□ -0.53
VTA1-205ENST00000620996 DHX32Q7L7V1 743 aaKnown RBP11.75□□□□□ -0.53
VTA1-205ENST00000620996 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
VTA1-205ENST00000620996 RREB1Q92766 1687 aa11.75□□□□□ -0.53
VTA1-205ENST00000620996 HMGB1P09429 215 aaKnown RBP11.75□□□□□ -0.53
VTA1-205ENST00000620996 LARP1BQ659C4 914 aaKnown RBP11.75□□□□□ -0.53
VTA1-205ENST00000620996 FERMT3Q86UX7 667 aa11.75□□□□□ -0.53
VTA1-205ENST00000620996 KLRK1P26718 216 aa11.75□□□□□ -0.53
VTA1-205ENST00000620996 TSGA10IPQ3SY00 556 aa11.75□□□□□ -0.53
VTA1-205ENST00000620996 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
VTA1-205ENST00000620996 RPGRQ92834 1020 aaKnown RBP11.75□□□□□ -0.53
VTA1-205ENST00000620996 ZNF512BQ96KM6 892 aaPredicted RBP11.75□□□□□ -0.53
VTA1-205ENST00000620996 RTL9Q8NET4 1388 aa11.74□□□□□ -0.53
VTA1-205ENST00000620996 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
VTA1-205ENST00000620996 GOLGA6L3A6NEY3 463 aa11.74□□□□□ -0.53
VTA1-205ENST00000620996 ST3GAL1Q11201 340 aa11.74□□□□□ -0.53
VTA1-205ENST00000620996 TRDNQ13061 729 aa11.74□□□□□ -0.53
VTA1-205ENST00000620996 ZSCAN22P10073 491 aaPredicted RBP11.74□□□□□ -0.53
VTA1-205ENST00000620996 SLC51AQ86UW1 340 aa11.74□□□□□ -0.53
VTA1-205ENST00000620996 FAM184AQ8NB25 1140 aa11.74□□□□□ -0.53
VTA1-205ENST00000620996 JAK2O60674 1132 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 APBA3O96018 575 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 CYP7A1P22680 504 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 TDO2P48775 406 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 UBE3CQ15386 1083 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 SLC10A5Q5PT55 438 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 NAPBQ9H115 298 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 CARMIL3Q8ND23 1372 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 FIBPO43427 364 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 UBE4AQ14139 1066 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 RRP12Q5JTH9 1297 aaKnown RBP11.73□□□□□ -0.53
VTA1-205ENST00000620996 GPHNQ9NQX3 736 aaPredicted RBP11.73□□□□□ -0.53
VTA1-205ENST00000620996 TAF1P21675 1872 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 COL4A1P02462 1669 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 ST5P78524 1137 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
VTA1-205ENST00000620996 LMBRD1Q9NUN5 540 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 SLC4A4Q9Y6R1 1079 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
VTA1-205ENST00000620996 PRC1O43663 620 aa11.72□□□□□ -0.53
VTA1-205ENST00000620996 PRKAB2O43741 272 aa11.72□□□□□ -0.53
VTA1-205ENST00000620996 BBXQ8WY36 941 aaPredicted RBP11.72□□□□□ -0.53
VTA1-205ENST00000620996 RBM27Q9P2N5 1060 aaKnown RBP11.72□□□□□ -0.53
VTA1-205ENST00000620996 CNPY2Q9Y2B0 182 aa11.72□□□□□ -0.53
VTA1-205ENST00000620996 H3BQV1 296 aa11.72□□□□□ -0.53
VTA1-205ENST00000620996 FOXP2O15409 715 aa11.72□□□□□ -0.53
VTA1-205ENST00000620996 SERPINB2P05120 415 aa11.72□□□□□ -0.53
VTA1-205ENST00000620996 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
VTA1-205ENST00000620996 TICAM2Q86XR7 235 aa11.72□□□□□ -0.53
VTA1-205ENST00000620996 NCOA7Q8NI08 942 aa11.72□□□□□ -0.53
VTA1-205ENST00000620996 GPR101Q96P66 508 aaPredicted RBP11.72□□□□□ -0.53
VTA1-205ENST00000620996 F13A1P00488 732 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 C4BP0C0L5 1744 aa11.71□□□□□ -0.53
VTA1-205ENST00000620996 RBM6P78332 1123 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms