RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 TIMM10P62072 90 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 CDC37L1Q7L3B6 337 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 USP17L1Q7RTZ2 530 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 ZNF804AQ7Z570 1209 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 RPAP2Q8IXW5 612 aaPredicted RBP6.48□□□□□ -1.37
SHMT1-211ENST00000618902 REM2Q8IYK8 340 aaPredicted RBP6.48□□□□□ -1.37
SHMT1-211ENST00000618902 JMYQ8N9B5 988 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 MRIQ9BWK5 157 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 TLR7Q9NYK1 1049 aaKnown RBP6.48□□□□□ -1.37
SHMT1-211ENST00000618902 SUGT1Q9Y2Z0 365 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 PASKQ96RG2 1323 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 COL1A1P02452 1464 aaPredicted RBP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 TMEM88BA6NKF7 163 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 PSMD14O00487 310 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 SMARCA5O60264 1052 aaPredicted RBP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 ITGBL1O95965 494 aaPredicted RBP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 PHKA1P46020 1223 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 KCNJ4P48050 445 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 FKBP1BP68106 108 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 G3BP1Q13283 466 aaKnown RBP eCLIP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 PUM3Q15397 648 aaKnown RBP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 GRIK5Q16478 980 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 ATP2B3Q16720 1220 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 RSBN1LQ6PCB5 846 aaPredicted RBP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 TMED8Q6PL24 325 aaPredicted RBP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 CNTROBQ8N137 903 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 CERS5Q8N5B7 392 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 DNAJC5GQ8N7S2 189 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 MTMR14Q8NCE2 650 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 TBC1D22AQ8WUA7 517 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 EAF2Q96CJ1 260 aaPredicted RBP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 GMLQ99445 158 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 CD209Q9NNX6 404 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 CEP126Q9P2H0 1117 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 CNOT7Q9UIV1 285 aaKnown RBP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 HDAC9Q9UKV0 1011 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 IQSEC3Q9UPP2 1182 aaPredicted RBP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 JAG2Q9Y219 1238 aa6.47□□□□□ -1.37
SHMT1-211ENST00000618902 ZBTB12Q9Y330 459 aaPredicted RBP6.47□□□□□ -1.37
SHMT1-211ENST00000618902 A0A1B0GUL7 405 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 APBB1O00213 710 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 IGHDP01880 384 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 USP17L8P0C7I0 530 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 IL1R1P14778 569 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 GMPSP49915 693 aaPredicted RBP6.46□□□□□ -1.38
SHMT1-211ENST00000618902 SCARF1Q14162 830 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 TNNI3KQ59H18 835 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 CAVIN4Q5BKX8 364 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 DACT2Q5SW24 774 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 TDRD7Q8NHU6 1098 aaKnown RBP6.46□□□□□ -1.38
SHMT1-211ENST00000618902 RHPN1Q8TCX5 695 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 LPIN2Q92539 896 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 KLRG1Q96E93 195 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 DBNDD2Q9BQY9 259 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 DCTPP1Q9H773 170 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 IL1RAPL2Q9NP60 686 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 DBNLQ9UJU6 430 aaKnown RBP6.46□□□□□ -1.38
SHMT1-211ENST00000618902 CLEC11AQ9Y240 323 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 GJA3Q9Y6H8 435 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 FPGT-TNNI3KV9GXZ4 949 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 AOX1Q06278 1338 aa6.46□□□□□ -1.38
SHMT1-211ENST00000618902 ADAMTSL1Q8N6G6 1762 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 RASSF10A6NK89 507 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 SEMA3EO15041 775 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 CA12O43570 354 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 EGFRP00533 1210 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 IFIT1P09914 478 aaKnown RBP6.45□□□□□ -1.38
SHMT1-211ENST00000618902 POTEIP0CG38 1075 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 POTEJP0CG39 1038 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 SLC5A1P13866 664 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 HIBADHP31937 336 aaKnown RBP6.45□□□□□ -1.38
SHMT1-211ENST00000618902 MAP2K2P36507 400 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 EPS15P42566 896 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 ECE1P42892 770 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 GTF2IP78347 998 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 HDLBPQ00341 1268 aaKnown RBP6.45□□□□□ -1.38
SHMT1-211ENST00000618902 EAPPQ56P03 285 aaPredicted RBP6.45□□□□□ -1.38
SHMT1-211ENST00000618902 TTLL5Q6EMB2 1281 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 PI16Q6UXB8 463 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 TRPM4Q8TD43 1214 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 OTUD7AQ8TE49 926 aaPredicted RBP6.45□□□□□ -1.38
SHMT1-211ENST00000618902 DCPSQ96C86 337 aaKnown RBP6.45□□□□□ -1.38
SHMT1-211ENST00000618902 XAGE2Q96GT9 111 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 IPO9Q96P70 1041 aaKnown RBP6.45□□□□□ -1.38
SHMT1-211ENST00000618902 CCDC8Q9H0W5 538 aaPredicted RBP6.45□□□□□ -1.38
SHMT1-211ENST00000618902 GPR108Q9NPR9 543 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 PCDHAC2Q9Y5I4 1007 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 PPP2R3BQ9Y5P8 575 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 PSME4Q14997 1843 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 MAST3O60307 1309 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 FAM205AQ6ZU69 1335 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 ARAP2Q8WZ64 1704 aa6.45□□□□□ -1.38
SHMT1-211ENST00000618902 MYO1BO43795 1136 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 HMMRO75330 724 aa6.44□□□□□ -1.38
SHMT1-211ENST00000618902 HIRAP54198 1017 aaPredicted RBP6.44□□□□□ -1.38
SHMT1-211ENST00000618902 MAP2K1Q02750 393 aaPredicted RBP6.44□□□□□ -1.38
SHMT1-211ENST00000618902 CHAF1AQ13111 956 aaPredicted RBP6.44□□□□□ -1.38
SHMT1-211ENST00000618902 OS9Q13438 667 aaPredicted RBP6.44□□□□□ -1.38
SHMT1-211ENST00000618902 HDAC1Q13547 482 aaPredicted RBP6.44□□□□□ -1.38
SHMT1-211ENST00000618902 RASGRF1Q13972 1273 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms