RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CETN1Q12798 172 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 DNTTIP2Q5QJE6 756 aaKnown RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 TBX22Q9Y458 520 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 CREBRFQ8IUR6 639 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 DUOX1Q9NRD9 1551 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 NHSL1Q5SYE7 1610 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 MFSD14CQ5VZR4 134 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 PRKG1Q13976 671 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 TPCN1Q9ULQ1 816 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 ADGRB1O14514 1584 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 BPIFB4P59827 614 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 MAP7D2Q96T17 732 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 FSD1Q9BTV5 496 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 XRCC6P12956 609 aaKnown RBP eCLIP3.88□□□□□ -1.79
LPP-220ENST00000617246 CASTP20810 708 aaKnown RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 EXOC8Q8IYI6 725 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 NLRP7Q8WX94 980 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 CWC25Q9NXE8 425 aaPredicted RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 ANAPC15P60006 121 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 CFAP58Q5T655 872 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 RILPL2Q969X0 211 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 BICD1Q96G01 975 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 TTC12Q9H892 705 aaPredicted RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 CEP126Q9P2H0 1117 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 SUGP1Q8IWZ8 645 aaKnown RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 TTC6Q86TZ1 520 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 MICAL1Q8TDZ2 1067 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 HYPKQ9NX55 129 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 MAGEC2Q9UBF1 373 aaPredicted RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 EPB41L2O43491 1005 aaKnown RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 PAX3P23760 479 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 NFX1Q12986 1120 aaKnown RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 FTOQ9C0B1 505 aaKnown RBP eCLIP3.88□□□□□ -1.79
LPP-220ENST00000617246 EDC4Q6P2E9 1401 aaKnown RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 LMBR1LQ6UX01 489 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 SMARCC2Q8TAQ2 1214 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 AZI2Q9H6S1 392 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 PPEF1O14829 653 aaPredicted RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 MSNP26038 577 aaKnown RBP3.88□□□□□ -1.79
LPP-220ENST00000617246 KIF4BQ2VIQ3 1234 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 C22orf23Q9BZE7 217 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 SPDYE3A6NKU9 549 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 SLC7A5P2Q9GIP4 190 aa3.88□□□□□ -1.79
LPP-220ENST00000617246 NCAPD2Q15021 1401 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 PTPDC1A2A3K4 754 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 KRT10P13645 584 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 PICALMQ13492 652 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 ZC3H14Q6PJT7 736 aaKnown RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 DACH1Q9UI36 760 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 MMP14P50281 582 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 ILDR1Q86SU0 546 aaPredicted RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 AKAP7Q9P0M2 348 aaPredicted RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 ATF5Q9Y2D1 282 aaPredicted RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 CEP83Q9Y592 693 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 PPFIA3O75145 1194 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 SKAP1Q86WV1 359 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 KCNG1Q9UIX4 513 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 ZNF697Q5TEC3 545 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 TTC16Q8NEE8 873 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 PKNOX2Q96KN3 472 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 KAT14Q9H8E8 782 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 MAP3K20Q9NYL2 800 aaKnown RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 DRC7Q8IY82 874 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 RABGGTAQ92696 567 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 CTNNA3Q9UI47 895 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 MSRAQ9UJ68 235 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 TCHHQ07283 1943 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 EVI5O60447 810 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 KIF5BP33176 963 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 FAM161AQ3B820 660 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 PREPLQ4J6C6 727 aaPredicted RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 CIAPIN1Q6FI81 312 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 ARAP2Q8WZ64 1704 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 IGSF1Q8N6C5 1336 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 AMER1Q5JTC6 1135 aaPredicted RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 PCDHB9Q9Y5E1 797 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 U3KPZ7 1027 aaPredicted RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 INAVAQ3KP66 663 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 PARK7Q99497 189 aaKnown RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 RNF123Q5XPI4 1314 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 F8W8V4 182 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 CCT4P50991 539 aaKnown RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 SCG3Q8WXD2 468 aaKnown RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 SETBP1Q9Y6X0 1596 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 ATP8B3O60423 1300 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 TRIML1Q8N9V2 468 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 URGCPQ8TCY9 931 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 TSPY3P0CV98 308 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 TSPY8P0CW00 308 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 CALML3P27482 149 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 NAPBQ9H115 298 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 SBNO1A3KN83 1393 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 ZKSCAN4Q969J2 545 aaPredicted RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 DTNBP1Q96EV8 351 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 ADALQ6DHV7 355 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 DGKZQ13574 1117 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 UIMC1Q96RL1 719 aa3.87□□□□□ -1.79
LPP-220ENST00000617246 STN1Q9H668 368 aaKnown RBP3.87□□□□□ -1.79
LPP-220ENST00000617246 ANO2Q9NQ90 1003 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms