RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 GREM2Q9H772 168 aa22.57■■□□□ 1.2
TRAPPC3-209ENST00000616395 LEMD3Q9Y2U8 911 aa22.57■■□□□ 1.2
TRAPPC3-209ENST00000616395 PCDHAC2Q9Y5I4 1007 aa22.57■■□□□ 1.2
TRAPPC3-209ENST00000616395 SUPT20HL1Q3ZLR7 823 aa22.57■■□□□ 1.2
TRAPPC3-209ENST00000616395 NBPF12Q5TAG4 269 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC3-209ENST00000616395 TRIOBPQ9H2D6 2365 aa22.56■■□□□ 1.2
TRAPPC3-209ENST00000616395 SPEF2Q9C093 1822 aa22.56■■□□□ 1.2
TRAPPC3-209ENST00000616395 CLRN2A0PK11 232 aa22.56■■□□□ 1.2
TRAPPC3-209ENST00000616395 USP2O75604 605 aaPredicted RBP22.56■■□□□ 1.2
TRAPPC3-209ENST00000616395 IREB2P48200 963 aaKnown RBP22.56■■□□□ 1.2
TRAPPC3-209ENST00000616395 RBM27Q9P2N5 1060 aaKnown RBP22.56■■□□□ 1.2
TRAPPC3-209ENST00000616395 ZNF804BA4D1E1 1349 aa22.55■■□□□ 1.2
TRAPPC3-209ENST00000616395 ARHGEF6Q15052 776 aa22.55■■□□□ 1.2
TRAPPC3-209ENST00000616395 ANKRD13AQ8IZ07 590 aa22.55■■□□□ 1.2
TRAPPC3-209ENST00000616395 SLC17A8Q8NDX2 589 aa22.55■■□□□ 1.2
TRAPPC3-209ENST00000616395 METTL22Q9BUU2 404 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC3-209ENST00000616395 ADAMTS8Q9UP79 889 aa22.55■■□□□ 1.2
TRAPPC3-209ENST00000616395 CERS5Q8N5B7 392 aa22.54■■□□□ 1.2
TRAPPC3-209ENST00000616395 MTMR14Q8NCE2 650 aa22.54■■□□□ 1.2
TRAPPC3-209ENST00000616395 SH3TC2Q8TF17 1288 aa22.54■■□□□ 1.2
TRAPPC3-209ENST00000616395 OPTNQ96CV9 577 aa22.54■■□□□ 1.2
TRAPPC3-209ENST00000616395 FAM9BQ8IZU0 186 aa22.53■■□□□ 1.2
TRAPPC3-209ENST00000616395 MS4A4AQ96JQ5 239 aa22.53■■□□□ 1.2
TRAPPC3-209ENST00000616395 ELP3Q9H9T3 547 aa22.53■■□□□ 1.2
TRAPPC3-209ENST00000616395 VEZTQ9HBM0 779 aa22.53■■□□□ 1.2
TRAPPC3-209ENST00000616395 MBIPQ9NS73 344 aa22.53■■□□□ 1.2
TRAPPC3-209ENST00000616395 AOX1Q06278 1338 aa22.52■■□□□ 1.2
TRAPPC3-209ENST00000616395 TAF1CQ15572 869 aaPredicted RBP22.52■■□□□ 1.2
TRAPPC3-209ENST00000616395 F8W031 263 aaPredicted RBP22.51■■□□□ 1.19
TRAPPC3-209ENST00000616395 MYO1BO43795 1136 aa22.51■■□□□ 1.19
TRAPPC3-209ENST00000616395 CFAP100Q494V2 611 aa22.51■■□□□ 1.19
TRAPPC3-209ENST00000616395 BRI3BPQ8WY22 251 aa22.51■■□□□ 1.19
TRAPPC3-209ENST00000616395 PRMT6Q96LA8 375 aaPredicted RBP22.51■■□□□ 1.19
TRAPPC3-209ENST00000616395 ZFYVE28Q9HCC9 887 aa22.51■■□□□ 1.19
TRAPPC3-209ENST00000616395 CD209Q9NNX6 404 aa22.51■■□□□ 1.19
TRAPPC3-209ENST00000616395 CEP290O15078 2479 aa22.51■■□□□ 1.19
TRAPPC3-209ENST00000616395 SPDYE2BA6NHP3 402 aa22.5■■□□□ 1.19
TRAPPC3-209ENST00000616395 ELL2O00472 640 aaPredicted RBP22.5■■□□□ 1.19
TRAPPC3-209ENST00000616395 SPDYE6P0CI01 402 aa22.5■■□□□ 1.19
TRAPPC3-209ENST00000616395 IGHMBP2P38935 993 aaKnown RBP22.5■■□□□ 1.19
TRAPPC3-209ENST00000616395 RASA3Q14644 834 aa22.5■■□□□ 1.19
TRAPPC3-209ENST00000616395 DPF3Q92784 378 aa22.5■■□□□ 1.19
TRAPPC3-209ENST00000616395 ANKRD2Q9GZV1 360 aa22.5■■□□□ 1.19
TRAPPC3-209ENST00000616395 RANBP2P49792 3224 aaKnown RBP22.49■■□□□ 1.19
TRAPPC3-209ENST00000616395 IGKV5-2P06315 115 aa22.49■■□□□ 1.19
TRAPPC3-209ENST00000616395 CNKSR2Q8WXI2 1034 aa22.49■■□□□ 1.19
TRAPPC3-209ENST00000616395 MAP3K2Q9Y2U5 619 aa22.49■■□□□ 1.19
TRAPPC3-209ENST00000616395 DDX58O95786 925 aaKnown RBP22.48■■□□□ 1.19
TRAPPC3-209ENST00000616395 KCNJ4P48050 445 aa22.48■■□□□ 1.19
TRAPPC3-209ENST00000616395 RUNDC1Q96C34 613 aa22.48■■□□□ 1.19
TRAPPC3-209ENST00000616395 ARHGAP39Q9C0H5 1083 aa22.48■■□□□ 1.19
TRAPPC3-209ENST00000616395 ECM29Q5VYK3 1845 aa22.47■■□□□ 1.19
TRAPPC3-209ENST00000616395 CCL15-CCL14A0A0B4J2E2 113 aa22.47■■□□□ 1.19
TRAPPC3-209ENST00000616395 HNRNPUQ00839 825 aaKnown RBP eCLIP22.47■■□□□ 1.19
TRAPPC3-209ENST00000616395 CCL15Q16663 113 aa22.47■■□□□ 1.19
TRAPPC3-209ENST00000616395 FAM43AQ8N2R8 423 aa22.47■■□□□ 1.19
TRAPPC3-209ENST00000616395 SHISA4Q96DD7 197 aa22.47■■□□□ 1.19
TRAPPC3-209ENST00000616395 OTOFQ9HC10 1997 aa22.46■■□□□ 1.19
TRAPPC3-209ENST00000616395 SNAP23O00161 211 aa22.45■■□□□ 1.18
TRAPPC3-209ENST00000616395 GTF2A2P52657 109 aa22.45■■□□□ 1.18
TRAPPC3-209ENST00000616395 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.45■■□□□ 1.18
TRAPPC3-209ENST00000616395 MPHOSPH8Q99549 860 aa22.45■■□□□ 1.18
TRAPPC3-209ENST00000616395 IRS2Q9Y4H2 1338 aa22.45■■□□□ 1.18
TRAPPC3-209ENST00000616395 MYH3P11055 1940 aa22.44■■□□□ 1.18
TRAPPC3-209ENST00000616395 ZSWIM8A7E2V4 1837 aa22.44■■□□□ 1.18
TRAPPC3-209ENST00000616395 ITGA6P23229 1130 aa22.44■■□□□ 1.18
TRAPPC3-209ENST00000616395 RBM5P52756 815 aaKnown RBP eCLIP22.44■■□□□ 1.18
TRAPPC3-209ENST00000616395 CHRNDQ07001 517 aa22.44■■□□□ 1.18
TRAPPC3-209ENST00000616395 CWF19L2Q2TBE0 894 aaKnown RBP22.44■■□□□ 1.18
TRAPPC3-209ENST00000616395 PRO3102Q9H379 93 aa22.44■■□□□ 1.18
TRAPPC3-209ENST00000616395 ZNF853P0CG23 659 aa22.43■■□□□ 1.18
TRAPPC3-209ENST00000616395 LACTBP83111 547 aaPredicted RBP22.43■■□□□ 1.18
TRAPPC3-209ENST00000616395 KIF22Q14807 665 aa22.43■■□□□ 1.18
TRAPPC3-209ENST00000616395 MTFR1Q15390 333 aa22.43■■□□□ 1.18
TRAPPC3-209ENST00000616395 UBE3BQ7Z3V4 1068 aa22.43■■□□□ 1.18
TRAPPC3-209ENST00000616395 CDAN1Q8IWY9 1227 aa22.43■■□□□ 1.18
TRAPPC3-209ENST00000616395 JAG2Q9Y219 1238 aa22.43■■□□□ 1.18
TRAPPC3-209ENST00000616395 PI4KAP2A4QPH2 592 aa22.42■■□□□ 1.18
TRAPPC3-209ENST00000616395 VGLL4Q14135 290 aa22.42■■□□□ 1.18
TRAPPC3-209ENST00000616395 KSR2Q6VAB6 950 aa22.42■■□□□ 1.18
TRAPPC3-209ENST00000616395 PI4KAP1Q8N8J0 262 aa22.42■■□□□ 1.18
TRAPPC3-209ENST00000616395 COL6A3P12111 3177 aa22.42■■□□□ 1.18
TRAPPC3-209ENST00000616395 H7C1W4 665 aa22.41■■□□□ 1.18
TRAPPC3-209ENST00000616395 TLR2O60603 784 aa22.41■■□□□ 1.18
TRAPPC3-209ENST00000616395 ECM2O94769 699 aaPredicted RBP22.41■■□□□ 1.18
TRAPPC3-209ENST00000616395 FKBP1AP62942 108 aaKnown RBP22.41■■□□□ 1.18
TRAPPC3-209ENST00000616395 C8orf58Q8NAV2 365 aa22.41■■□□□ 1.18
TRAPPC3-209ENST00000616395 TEPSINQ96N21 525 aa22.41■■□□□ 1.18
TRAPPC3-209ENST00000616395 A0A0C4DFX4 3053 aa22.4■■□□□ 1.18
TRAPPC3-209ENST00000616395 NEURL1BA8MQ27 555 aa22.4■■□□□ 1.18
TRAPPC3-209ENST00000616395 TAF5LO75529 589 aa22.4■■□□□ 1.18
TRAPPC3-209ENST00000616395 IL1R1P14778 569 aa22.4■■□□□ 1.18
TRAPPC3-209ENST00000616395 MAP3K9P80192 1104 aa22.4■■□□□ 1.18
TRAPPC3-209ENST00000616395 NEXNQ0ZGT2 675 aa22.4■■□□□ 1.18
TRAPPC3-209ENST00000616395 TNFAIP1Q13829 316 aa22.4■■□□□ 1.18
TRAPPC3-209ENST00000616395 C15orf52Q6ZUT6 534 aaKnown RBP22.4■■□□□ 1.18
TRAPPC3-209ENST00000616395 ZNF70Q9UC06 446 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC3-209ENST00000616395 APAF1O14727 1248 aa22.39■■□□□ 1.18
TRAPPC3-209ENST00000616395 WDHD1O75717 1129 aaPredicted RBP22.39■■□□□ 1.18
TRAPPC3-209ENST00000616395 GNRH1P01148 92 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms