RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 API5Q9BZZ5 524 aaKnown RBP28.52■■■□□ 2.16
FAM228B-208ENST00000613899 ZNF157P51786 506 aaPredicted RBP28.51■■■□□ 2.15
FAM228B-208ENST00000613899 ZBED3Q96IU2 234 aaPredicted RBP28.51■■■□□ 2.15
FAM228B-208ENST00000613899 NOB1Q9ULX3 412 aaKnown RBP28.51■■■□□ 2.15
FAM228B-208ENST00000613899 HIBADHP31937 336 aaKnown RBP28.5■■■□□ 2.15
FAM228B-208ENST00000613899 DLGAP5Q15398 846 aa28.5■■■□□ 2.15
FAM228B-208ENST00000613899 METTL24Q5JXM2 366 aa28.5■■■□□ 2.15
FAM228B-208ENST00000613899 SCAF8Q9UPN6 1271 aaKnown RBP28.5■■■□□ 2.15
FAM228B-208ENST00000613899 COL1A1P02452 1464 aaPredicted RBP28.5■■■□□ 2.15
FAM228B-208ENST00000613899 KIF16BQ96L93 1317 aa28.49■■■□□ 2.15
FAM228B-208ENST00000613899 FAM155AB1AL88 458 aaPredicted RBP28.49■■■□□ 2.15
FAM228B-208ENST00000613899 NF2P35240 595 aa28.49■■■□□ 2.15
FAM228B-208ENST00000613899 LRRC24Q50LG9 513 aa28.49■■■□□ 2.15
FAM228B-208ENST00000613899 MTMR14Q8NCE2 650 aa28.49■■■□□ 2.15
FAM228B-208ENST00000613899 TDRD7Q8NHU6 1098 aaKnown RBP28.49■■■□□ 2.15
FAM228B-208ENST00000613899 FAM205AQ6ZU69 1335 aa28.48■■■□□ 2.15
FAM228B-208ENST00000613899 GYG1P46976 350 aa28.48■■■□□ 2.15
FAM228B-208ENST00000613899 FAM84BQ96KN1 310 aaPredicted RBP28.48■■■□□ 2.15
FAM228B-208ENST00000613899 SLC10A3P09131 477 aa28.47■■■□□ 2.15
FAM228B-208ENST00000613899 UBTFL1P0CB47 393 aaPredicted RBP28.47■■■□□ 2.15
FAM228B-208ENST00000613899 RARSP54136 660 aaKnown RBP28.47■■■□□ 2.15
FAM228B-208ENST00000613899 JAG2Q9Y219 1238 aa28.47■■■□□ 2.15
FAM228B-208ENST00000613899 F8W031 263 aaPredicted RBP28.46■■■□□ 2.15
FAM228B-208ENST00000613899 PDE8BO95263 885 aa28.46■■■□□ 2.15
FAM228B-208ENST00000613899 VPS37DQ86XT2 251 aa28.46■■■□□ 2.15
FAM228B-208ENST00000613899 VGLL2Q8N8G2 317 aa28.46■■■□□ 2.15
FAM228B-208ENST00000613899 KLHDC4Q8TBB5 520 aa28.46■■■□□ 2.15
FAM228B-208ENST00000613899 HDAC5Q9UQL6 1122 aa28.46■■■□□ 2.15
FAM228B-208ENST00000613899 MYO1BO43795 1136 aa28.45■■■□□ 2.14
FAM228B-208ENST00000613899 MFSD14BQ5SR56 506 aa28.45■■■□□ 2.14
FAM228B-208ENST00000613899 PRAMEF18Q5VWM3 479 aa28.45■■■□□ 2.14
FAM228B-208ENST00000613899 ZIC5Q96T25 663 aa28.45■■■□□ 2.14
FAM228B-208ENST00000613899 CAPN15O75808 1086 aa28.44■■■□□ 2.14
FAM228B-208ENST00000613899 CFAP100Q494V2 611 aa28.44■■■□□ 2.14
FAM228B-208ENST00000613899 CAVIN4Q5BKX8 364 aa28.44■■■□□ 2.14
FAM228B-208ENST00000613899 SPDYE2BA6NHP3 402 aa28.43■■■□□ 2.14
FAM228B-208ENST00000613899 SPDYE6P0CI01 402 aa28.43■■■□□ 2.14
FAM228B-208ENST00000613899 TTLL12Q14166 644 aaPredicted RBP28.43■■■□□ 2.14
FAM228B-208ENST00000613899 RASAL3Q86YV0 1011 aa28.43■■■□□ 2.14
FAM228B-208ENST00000613899 ARHGAP45Q92619 1136 aa28.43■■■□□ 2.14
FAM228B-208ENST00000613899 TSKSQ9UJT2 592 aa28.43■■■□□ 2.14
FAM228B-208ENST00000613899 RFX5P48382 616 aaPredicted RBP28.42■■■□□ 2.14
FAM228B-208ENST00000613899 KIF23Q02241 960 aaPredicted RBP28.42■■■□□ 2.14
FAM228B-208ENST00000613899 PUM3Q15397 648 aaKnown RBP28.42■■■□□ 2.14
FAM228B-208ENST00000613899 DIEXFQ68CQ4 756 aaKnown RBP28.42■■■□□ 2.14
FAM228B-208ENST00000613899 FBXO33Q7Z6M2 555 aa28.42■■■□□ 2.14
FAM228B-208ENST00000613899 PPP2R3BQ9Y5P8 575 aa28.42■■■□□ 2.14
FAM228B-208ENST00000613899 AKAP11Q9UKA4 1901 aa28.41■■■□□ 2.14
FAM228B-208ENST00000613899 EYA2O00167 538 aa28.41■■■□□ 2.14
FAM228B-208ENST00000613899 IFIT1P09914 478 aaKnown RBP28.4■■■□□ 2.14
FAM228B-208ENST00000613899 RBM5P52756 815 aaKnown RBP eCLIP28.4■■■□□ 2.14
FAM228B-208ENST00000613899 PTPN12Q05209 780 aaKnown RBP28.4■■■□□ 2.14
FAM228B-208ENST00000613899 MOB2Q70IA6 237 aa28.4■■■□□ 2.14
FAM228B-208ENST00000613899 REM2Q8IYK8 340 aaPredicted RBP28.4■■■□□ 2.14
FAM228B-208ENST00000613899 FBXO3Q9UK99 471 aa28.4■■■□□ 2.14
FAM228B-208ENST00000613899 FRAT2O75474 233 aaPredicted RBP28.39■■■□□ 2.14
FAM228B-208ENST00000613899 DEFB129Q9H1M3 183 aa28.39■■■□□ 2.14
FAM228B-208ENST00000613899 SAGE1Q9NXZ1 904 aa28.39■■■□□ 2.14
FAM228B-208ENST00000613899 SERPINA10Q9UK55 444 aa28.39■■■□□ 2.14
FAM228B-208ENST00000613899 TTF2Q9UNY4 1162 aaKnown RBP28.39■■■□□ 2.14
FAM228B-208ENST00000613899 PCDHAC2Q9Y5I4 1007 aa28.39■■■□□ 2.14
FAM228B-208ENST00000613899 MYH13Q9UKX3 1938 aa28.38■■■□□ 2.13
FAM228B-208ENST00000613899 UBE2Q2LH0YL09 131 aa28.38■■■□□ 2.13
FAM228B-208ENST00000613899 ARMC9Q7Z3E5 817 aa28.38■■■□□ 2.13
FAM228B-208ENST00000613899 MIER1Q8N108 512 aa28.38■■■□□ 2.13
FAM228B-208ENST00000613899 TBC1D22AQ8WUA7 517 aa28.38■■■□□ 2.13
FAM228B-208ENST00000613899 PRMT6Q96LA8 375 aaPredicted RBP28.38■■■□□ 2.13
FAM228B-208ENST00000613899 LRRFIP2Q9Y608 721 aaKnown RBP28.38■■■□□ 2.13
FAM228B-208ENST00000613899 CLRN2A0PK11 232 aa28.37■■■□□ 2.13
FAM228B-208ENST00000613899 IPO8O15397 1037 aaKnown RBP28.37■■■□□ 2.13
FAM228B-208ENST00000613899 FGFR2P21802 821 aa28.37■■■□□ 2.13
FAM228B-208ENST00000613899 IQSEC3Q9UPP2 1182 aaPredicted RBP28.37■■■□□ 2.13
FAM228B-208ENST00000613899 CIAO1O76071 339 aa28.36■■■□□ 2.13
FAM228B-208ENST00000613899 SLC5A1P13866 664 aa28.36■■■□□ 2.13
FAM228B-208ENST00000613899 CHAF1AQ13111 956 aaPredicted RBP28.36■■■□□ 2.13
FAM228B-208ENST00000613899 INTS3Q68E01 1043 aaKnown RBP28.36■■■□□ 2.13
FAM228B-208ENST00000613899 MEIS3Q99687 375 aa28.36■■■□□ 2.13
FAM228B-208ENST00000613899 VEZTQ9HBM0 779 aa28.36■■■□□ 2.13
FAM228B-208ENST00000613899 LPIN2Q92539 896 aa28.35■■■□□ 2.13
FAM228B-208ENST00000613899 CASP8AP2Q9UKL3 1982 aa28.35■■■□□ 2.13
FAM228B-208ENST00000613899 GNAI3P08754 354 aa28.34■■■□□ 2.13
FAM228B-208ENST00000613899 BCAMP50895 628 aa28.34■■■□□ 2.13
FAM228B-208ENST00000613899 HNRNPUQ00839 825 aaKnown RBP eCLIP28.34■■■□□ 2.13
FAM228B-208ENST00000613899 TNFAIP1Q13829 316 aa28.34■■■□□ 2.13
FAM228B-208ENST00000613899 ATG9AQ7Z3C6 839 aa28.34■■■□□ 2.13
FAM228B-208ENST00000613899 CSRNP1Q96S65 589 aa28.34■■■□□ 2.13
FAM228B-208ENST00000613899 SIL1Q9H173 461 aa28.34■■■□□ 2.13
FAM228B-208ENST00000613899 PRKG1Q13976 671 aa28.33■■■□□ 2.13
FAM228B-208ENST00000613899 CRKP46108 304 aa28.32■■■□□ 2.12
FAM228B-208ENST00000613899 SPDYE2Q495Y8 402 aa28.32■■■□□ 2.12
FAM228B-208ENST00000613899 RNF186Q9NXI6 227 aa28.32■■■□□ 2.12
FAM228B-208ENST00000613899 ANGEL1Q9UNK9 670 aaKnown RBP28.32■■■□□ 2.12
FAM228B-208ENST00000613899 SSC5DA1L4H1 1573 aa28.32■■■□□ 2.12
FAM228B-208ENST00000613899 PPP1R12BO60237 982 aaPredicted RBP28.31■■■□□ 2.12
FAM228B-208ENST00000613899 TRIM27P14373 513 aa28.31■■■□□ 2.12
FAM228B-208ENST00000613899 HDLBPQ00341 1268 aaKnown RBP28.31■■■□□ 2.12
FAM228B-208ENST00000613899 SUPT20HL1Q3ZLR7 823 aa28.31■■■□□ 2.12
FAM228B-208ENST00000613899 ATF7IPQ6VMQ6 1270 aa28.31■■■□□ 2.12
FAM228B-208ENST00000613899 DZIP1LQ8IYY4 767 aaKnown RBP28.31■■■□□ 2.12
FAM228B-208ENST00000613899 CEP126Q9P2H0 1117 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms