RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 RNF20Q5VTR2 975 aa6.07□□□□□ -1.44
SSX9-202ENST00000608568 CAVIN1Q6NZI2 390 aaKnown RBP6.07□□□□□ -1.44
SSX9-202ENST00000608568 C3orf67Q6ZVT6 689 aa6.07□□□□□ -1.44
SSX9-202ENST00000608568 DNAJC5GQ8N7S2 189 aa6.07□□□□□ -1.44
SSX9-202ENST00000608568 TTLL6Q8N841 843 aa6.07□□□□□ -1.44
SSX9-202ENST00000608568 CNBD1Q8NA66 436 aa6.07□□□□□ -1.44
SSX9-202ENST00000608568 PROCA1Q8NCQ7 364 aaPredicted RBP6.07□□□□□ -1.44
SSX9-202ENST00000608568 SECISBP2LQ93073 1101 aaKnown RBP6.07□□□□□ -1.44
SSX9-202ENST00000608568 RRAGCQ9HB90 399 aa6.07□□□□□ -1.44
SSX9-202ENST00000608568 ZNF541Q9H0D2 1346 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 ARAP2Q8WZ64 1704 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 A0A087WZG4 1122 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 K7ELQ4 463 aaPredicted RBP6.06□□□□□ -1.44
SSX9-202ENST00000608568 TBC1D12O60347 775 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 BAG4O95429 457 aaKnown RBP6.06□□□□□ -1.44
SSX9-202ENST00000608568 CT47B1P0C2W7 299 aaPredicted RBP6.06□□□□□ -1.44
SSX9-202ENST00000608568 SLFN14P0C7P3 912 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 SRGNP10124 158 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 LMNB1P20700 586 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 EIF4A1P60842 406 aaKnown RBP6.06□□□□□ -1.44
SSX9-202ENST00000608568 NOLC1Q14978 699 aaKnown RBP eCLIP6.06□□□□□ -1.44
SSX9-202ENST00000608568 TERF2Q15554 542 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 NFE2L2Q16236 605 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 ATP2B3Q16720 1220 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 KRT24Q2M2I5 525 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 ZSCAN23Q3MJ62 389 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 TMCO4Q5TGY1 634 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 PRPF40BQ6NWY9 871 aaKnown RBP6.06□□□□□ -1.44
SSX9-202ENST00000608568 LRP10Q7Z4F1 713 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 MICALL2Q8IY33 904 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 KRT222Q8N1A0 295 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 DDX12PQ92771 950 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 ZNF428Q96B54 188 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 GPCPD1Q9NPB8 672 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 DDX41Q9UJV9 622 aaKnown RBP6.06□□□□□ -1.44
SSX9-202ENST00000608568 PDE4DIPQ5VU43 2346 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 HTTP42858 3142 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 LAMB1P07942 1786 aa6.06□□□□□ -1.44
SSX9-202ENST00000608568 TTLL13PA6NNM8 815 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 H0YIN7 160 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 SNPHO15079 494 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 TOMM70O94826 608 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 IGHDP01880 384 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 SNRPA1P09661 255 aaKnown RBP6.05□□□□□ -1.44
SSX9-202ENST00000608568 WDR43Q15061 677 aaKnown RBP eCLIP6.05□□□□□ -1.44
SSX9-202ENST00000608568 SLFNL1Q499Z3 407 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 DPY19L2Q6NUT2 758 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 RPAINQ86UA6 219 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 SKAP1Q86WV1 359 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 NUTM1Q86Y26 1132 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 CCDC146Q8IYE0 955 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 RETREG2Q8NC44 543 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 BANK1Q8NDB2 785 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 RBM46Q8TBY0 533 aaKnown RBP6.05□□□□□ -1.44
SSX9-202ENST00000608568 C7orf43Q8WVR3 580 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 BRIP1Q9BX63 1249 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 USP25Q9UHP3 1055 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 HDAC5Q9UQL6 1122 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 TRPC6Q9Y210 931 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 COG6Q9Y2V7 657 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 RRP7AQ9Y3A4 280 aaKnown RBP6.05□□□□□ -1.44
SSX9-202ENST00000608568 PAXBP1Q9Y5B6 917 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 OTOFQ9HC10 1997 aa6.05□□□□□ -1.44
SSX9-202ENST00000608568 MAP3K15Q6ZN16 1313 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 LTBP3Q9NS15 1303 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 ZC3H4Q9UPT8 1303 aaKnown RBP6.04□□□□□ -1.44
SSX9-202ENST00000608568 C2orf72A6NCS6 295 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 GLTPD2A6NH11 291 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 GOLGA6L6A8MZA4 724 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 CYP2E1P05181 493 aaPredicted RBP6.04□□□□□ -1.44
SSX9-202ENST00000608568 MYL6BP14649 208 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 GPTP24298 496 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 HDAC1Q13547 482 aaPredicted RBP6.04□□□□□ -1.44
SSX9-202ENST00000608568 ERFEQ4G0M1 354 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 MUM1L1Q5H9M0 696 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 STYK1Q6J9G0 422 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 NBPF5PQ86XG9 351 aaPredicted RBP6.04□□□□□ -1.44
SSX9-202ENST00000608568 RTF1Q92541 710 aaKnown RBP6.04□□□□□ -1.44
SSX9-202ENST00000608568 SETDB2Q96T68 719 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 BEGAINQ9BUH8 593 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.04□□□□□ -1.44
SSX9-202ENST00000608568 TEX13AQ9BXU3 409 aaPredicted RBP6.04□□□□□ -1.44
SSX9-202ENST00000608568 RBSNQ9H1K0 784 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 ZBTB3Q9H5J0 574 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 POLR3EQ9NVU0 708 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 FAM53CQ9NYF3 392 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 CTNNA3Q9UI47 895 aa6.04□□□□□ -1.44
SSX9-202ENST00000608568 NIP7Q9Y221 180 aaKnown RBP eCLIP6.04□□□□□ -1.44
SSX9-202ENST00000608568 KLRG2A4D1S0 409 aaPredicted RBP6.03□□□□□ -1.44
SSX9-202ENST00000608568 VGLL3A8MV65 326 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 HTATSF1O43719 755 aaKnown RBP6.03□□□□□ -1.44
SSX9-202ENST00000608568 KIF1CO43896 1103 aaKnown RBP6.03□□□□□ -1.44
SSX9-202ENST00000608568 DDNO94850 711 aaPredicted RBP6.03□□□□□ -1.44
SSX9-202ENST00000608568 REC8O95072 547 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 NTSR2O95665 410 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 APPP05067 770 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 APLP1P51693 650 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 ST5P78524 1137 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 MDM2Q00987 491 aaPredicted RBP6.03□□□□□ -1.44
SSX9-202ENST00000608568 TAF7Q15545 349 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms