RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 WDR33Q9C0J8 1336 aaKnown RBP15.39■□□□□ 0.05
CTSA-210ENST00000606000 EYA2O00167 538 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 WNT10BO00744 389 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 PDE8BO95263 885 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 HIBADHP31937 336 aaKnown RBP15.38■□□□□ 0.05
CTSA-210ENST00000606000 ATG9AQ7Z3C6 839 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 SULF1Q8IWU6 871 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 OGFOD1Q8N543 542 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 TMEM57Q8N5G2 664 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 TDRD7Q8NHU6 1098 aaKnown RBP15.38■□□□□ 0.05
CTSA-210ENST00000606000 CDCA5Q96FF9 252 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 CAPNS2Q96L46 248 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 MYH13Q9UKX3 1938 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 AOX1Q06278 1338 aa15.38■□□□□ 0.05
CTSA-210ENST00000606000 AOC2O75106 756 aa15.37■□□□□ 0.05
CTSA-210ENST00000606000 PRAMEF18Q5VWM3 479 aa15.37■□□□□ 0.05
CTSA-210ENST00000606000 COL1A1P02452 1464 aaPredicted RBP15.36■□□□□ 0.05
CTSA-210ENST00000606000 IPO8O15397 1037 aaKnown RBP15.36■□□□□ 0.05
CTSA-210ENST00000606000 FGFR2P21802 821 aa15.36■□□□□ 0.05
CTSA-210ENST00000606000 GRIK5Q16478 980 aa15.36■□□□□ 0.05
CTSA-210ENST00000606000 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
CTSA-210ENST00000606000 ZBED3Q96IU2 234 aaPredicted RBP15.36■□□□□ 0.05
CTSA-210ENST00000606000 FAM205AQ6ZU69 1335 aa15.36■□□□□ 0.05
CTSA-210ENST00000606000 FOXN1O15353 648 aa15.35■□□□□ 0.05
CTSA-210ENST00000606000 RLBP1P12271 317 aa15.35■□□□□ 0.05
CTSA-210ENST00000606000 BCAMP50895 628 aa15.35■□□□□ 0.05
CTSA-210ENST00000606000 CHAF1AQ13111 956 aaPredicted RBP15.35■□□□□ 0.05
CTSA-210ENST00000606000 PUM3Q15397 648 aaKnown RBP15.35■□□□□ 0.05
CTSA-210ENST00000606000 FBXO33Q7Z6M2 555 aa15.35■□□□□ 0.05
CTSA-210ENST00000606000 GBA2Q9HCG7 927 aaPredicted RBP15.35■□□□□ 0.05
CTSA-210ENST00000606000 HDAC9Q9UKV0 1011 aa15.35■□□□□ 0.05
CTSA-210ENST00000606000 PITPNM2Q9BZ72 1349 aa15.35■□□□□ 0.05
CTSA-210ENST00000606000 PAPPA2Q9BXP8 1791 aa15.34■□□□□ 0.05
CTSA-210ENST00000606000 GNAI3P08754 354 aa15.34■□□□□ 0.05
CTSA-210ENST00000606000 HUNKP57058 714 aa15.34■□□□□ 0.05
CTSA-210ENST00000606000 MFSD14BQ5SR56 506 aa15.34■□□□□ 0.05
CTSA-210ENST00000606000 COL13A1Q5TAT6 717 aaPredicted RBP15.34■□□□□ 0.05
CTSA-210ENST00000606000 MOB2Q70IA6 237 aa15.34■□□□□ 0.05
CTSA-210ENST00000606000 SRGAP3O43295 1099 aa15.33■□□□□ 0.04
CTSA-210ENST00000606000 CIAO1O76071 339 aa15.33■□□□□ 0.04
CTSA-210ENST00000606000 FKBP1AP62942 108 aaKnown RBP15.33■□□□□ 0.04
CTSA-210ENST00000606000 CFAP100Q494V2 611 aa15.33■□□□□ 0.04
CTSA-210ENST00000606000 VPS37DQ86XT2 251 aa15.33■□□□□ 0.04
CTSA-210ENST00000606000 ZIC5Q96T25 663 aa15.33■□□□□ 0.04
CTSA-210ENST00000606000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.33■□□□□ 0.04
CTSA-210ENST00000606000 PNMA6EA0A0J9YXQ4 647 aa15.32■□□□□ 0.04
CTSA-210ENST00000606000 CLRN2A0PK11 232 aa15.32■□□□□ 0.04
CTSA-210ENST00000606000 IFIT1P09914 478 aaKnown RBP15.32■□□□□ 0.04
CTSA-210ENST00000606000 ECE1P42892 770 aa15.32■□□□□ 0.04
CTSA-210ENST00000606000 DLGAP5Q15398 846 aa15.32■□□□□ 0.04
CTSA-210ENST00000606000 CAVIN4Q5BKX8 364 aa15.32■□□□□ 0.04
CTSA-210ENST00000606000 C2orf69Q8N8R5 385 aa15.32■□□□□ 0.04
CTSA-210ENST00000606000 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
CTSA-210ENST00000606000 C1orf115Q9H7X2 142 aa15.32■□□□□ 0.04
CTSA-210ENST00000606000 COPRSQ9NQ92 184 aa15.32■□□□□ 0.04
CTSA-210ENST00000606000 WBP1LQ9NX94 342 aa15.32■□□□□ 0.04
CTSA-210ENST00000606000 SLC5A1P13866 664 aa15.31■□□□□ 0.04
CTSA-210ENST00000606000 MTX1Q13505 466 aa15.31■□□□□ 0.04
CTSA-210ENST00000606000 ATP2B3Q16720 1220 aa15.31■□□□□ 0.04
CTSA-210ENST00000606000 LPIN2Q92539 896 aa15.31■□□□□ 0.04
CTSA-210ENST00000606000 HHIPL1Q96JK4 782 aa15.31■□□□□ 0.04
CTSA-210ENST00000606000 TTF2Q9UNY4 1162 aaKnown RBP15.31■□□□□ 0.04
CTSA-210ENST00000606000 FZD1Q9UP38 647 aa15.31■□□□□ 0.04
CTSA-210ENST00000606000 HDAC5Q9UQL6 1122 aa15.31■□□□□ 0.04
CTSA-210ENST00000606000 SSC5DA1L4H1 1573 aa15.31■□□□□ 0.04
CTSA-210ENST00000606000 PCNTO95613 3336 aa15.3■□□□□ 0.04
CTSA-210ENST00000606000 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
CTSA-210ENST00000606000 FAM155AB1AL88 458 aaPredicted RBP15.3■□□□□ 0.04
CTSA-210ENST00000606000 FRAT2O75474 233 aaPredicted RBP15.3■□□□□ 0.04
CTSA-210ENST00000606000 GNAI2P04899 355 aa15.3■□□□□ 0.04
CTSA-210ENST00000606000 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
CTSA-210ENST00000606000 ADORA1P30542 326 aa15.3■□□□□ 0.04
CTSA-210ENST00000606000 IL15P40933 162 aaPredicted RBP15.3■□□□□ 0.04
CTSA-210ENST00000606000 RBM5P52756 815 aaKnown RBP eCLIP15.3■□□□□ 0.041e-13■■■□□ 18.6
CTSA-210ENST00000606000 RGMBQ6NW40 437 aa15.3■□□□□ 0.04
CTSA-210ENST00000606000 ITPRIPQ8IWB1 547 aa15.3■□□□□ 0.04
CTSA-210ENST00000606000 FTSJ3Q8IY81 847 aaKnown RBP15.3■□□□□ 0.04
CTSA-210ENST00000606000 DZIP1LQ8IYY4 767 aaKnown RBP15.3■□□□□ 0.04
CTSA-210ENST00000606000 MTMR14Q8NCE2 650 aa15.3■□□□□ 0.04
CTSA-210ENST00000606000 CEP126Q9P2H0 1117 aa15.3■□□□□ 0.04
CTSA-210ENST00000606000 FBXO3Q9UK99 471 aa15.3■□□□□ 0.04
CTSA-210ENST00000606000 MMP14P50281 582 aa15.29■□□□□ 0.04
CTSA-210ENST00000606000 PRKG1Q13976 671 aa15.29■□□□□ 0.04
CTSA-210ENST00000606000 APOBEC3FQ8IUX4 373 aaKnown RBP15.29■□□□□ 0.04
CTSA-210ENST00000606000 PANK1Q8TE04 598 aa15.29■□□□□ 0.04
CTSA-210ENST00000606000 VEZTQ9HBM0 779 aa15.29■□□□□ 0.04
CTSA-210ENST00000606000 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
CTSA-210ENST00000606000 UBE2Q2LH0YL09 131 aa15.28■□□□□ 0.04
CTSA-210ENST00000606000 PHKA1P46020 1223 aa15.28■□□□□ 0.04
CTSA-210ENST00000606000 CRKP46108 304 aa15.28■□□□□ 0.04
CTSA-210ENST00000606000 TFCP2Q12800 502 aa15.28■□□□□ 0.04
CTSA-210ENST00000606000 AIDAQ96BJ3 306 aa15.28■□□□□ 0.04
CTSA-210ENST00000606000 TDRD3Q9H7E2 651 aaKnown RBP15.28■□□□□ 0.04
CTSA-210ENST00000606000 HSPA8P11142 646 aaKnown RBP15.27■□□□□ 0.04
CTSA-210ENST00000606000 ZNF157P51786 506 aaPredicted RBP15.27■□□□□ 0.04
CTSA-210ENST00000606000 MAP2K1Q02750 393 aaPredicted RBP15.27■□□□□ 0.04
CTSA-210ENST00000606000 DEFB129Q9H1M3 183 aa15.27■□□□□ 0.04
CTSA-210ENST00000606000 OTOFQ9HC10 1997 aa15.27■□□□□ 0.03
CTSA-210ENST00000606000 ZBTB7BO15156 539 aaPredicted RBP15.26■□□□□ 0.03
CTSA-210ENST00000606000 SLC10A3P09131 477 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms