RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TDRD7Q8NHU6 1098 aaKnown RBP17.93■□□□□ 0.46
TUBE1-208ENST00000604743 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
TUBE1-208ENST00000604743 CEP126Q9P2H0 1117 aa17.93■□□□□ 0.46
TUBE1-208ENST00000604743 RCAN3Q9UKA8 241 aa17.93■□□□□ 0.46
TUBE1-208ENST00000604743 HDAC9Q9UKV0 1011 aa17.93■□□□□ 0.46
TUBE1-208ENST00000604743 MYH13Q9UKX3 1938 aa17.93■□□□□ 0.46
TUBE1-208ENST00000604743 ADM5C9JUS6 153 aa17.92■□□□□ 0.46
TUBE1-208ENST00000604743 SASH1O94885 1247 aa17.92■□□□□ 0.46
TUBE1-208ENST00000604743 SLC5A1P13866 664 aa17.92■□□□□ 0.46
TUBE1-208ENST00000604743 IL15P40933 162 aaPredicted RBP17.92■□□□□ 0.46
TUBE1-208ENST00000604743 BCAMP50895 628 aa17.92■□□□□ 0.46
TUBE1-208ENST00000604743 CHAF1AQ13111 956 aaPredicted RBP17.92■□□□□ 0.46
TUBE1-208ENST00000604743 NBPF9Q3BBW0 867 aa17.92■□□□□ 0.46
TUBE1-208ENST00000604743 CST9Q5W186 159 aa17.92■□□□□ 0.46
TUBE1-208ENST00000604743 FBXO33Q7Z6M2 555 aa17.92■□□□□ 0.46
TUBE1-208ENST00000604743 COPRSQ9NQ92 184 aa17.92■□□□□ 0.46
TUBE1-208ENST00000604743 FBXO3Q9UK99 471 aa17.92■□□□□ 0.46
TUBE1-208ENST00000604743 SCAF8Q9UPN6 1271 aaKnown RBP17.92■□□□□ 0.46
TUBE1-208ENST00000604743 PNMA6EA0A0J9YXQ4 647 aa17.91■□□□□ 0.46
TUBE1-208ENST00000604743 FGFR2P21802 821 aa17.91■□□□□ 0.46
TUBE1-208ENST00000604743 MTX1Q13505 466 aa17.91■□□□□ 0.46
TUBE1-208ENST00000604743 SULF1Q8IWU6 871 aa17.91■□□□□ 0.46
TUBE1-208ENST00000604743 ATP2B3Q16720 1220 aa17.9■□□□□ 0.46
TUBE1-208ENST00000604743 DEFB115Q30KQ5 88 aa17.9■□□□□ 0.46
TUBE1-208ENST00000604743 MFSD14BQ5SR56 506 aa17.9■□□□□ 0.46
TUBE1-208ENST00000604743 PAXIP1Q6ZW49 1069 aaPredicted RBP17.9■□□□□ 0.46
TUBE1-208ENST00000604743 LPIN2Q92539 896 aa17.9■□□□□ 0.46
TUBE1-208ENST00000604743 FAM205AQ6ZU69 1335 aa17.9■□□□□ 0.46
TUBE1-208ENST00000604743 WNT10BO00744 389 aa17.89■□□□□ 0.45
TUBE1-208ENST00000604743 ZBTB7BO15156 539 aaPredicted RBP17.89■□□□□ 0.45
TUBE1-208ENST00000604743 CNTNAP1P78357 1384 aa17.89■□□□□ 0.45
TUBE1-208ENST00000604743 MS4A1P11836 297 aa17.88■□□□□ 0.45
TUBE1-208ENST00000604743 RBM5P52756 815 aaKnown RBP eCLIP17.88■□□□□ 0.45
TUBE1-208ENST00000604743 FKBP1AP62942 108 aaKnown RBP17.88■□□□□ 0.45
TUBE1-208ENST00000604743 GRM1Q13255 1194 aa17.88■□□□□ 0.45
TUBE1-208ENST00000604743 DLGAP5Q15398 846 aa17.88■□□□□ 0.45
TUBE1-208ENST00000604743 VEGFBP49765 207 aa17.87■□□□□ 0.45
TUBE1-208ENST00000604743 MMP14P50281 582 aa17.87■□□□□ 0.45
TUBE1-208ENST00000604743 TFCP2Q12800 502 aa17.87■□□□□ 0.45
TUBE1-208ENST00000604743 G3BP1Q13283 466 aaKnown RBP eCLIP17.87■□□□□ 0.45
TUBE1-208ENST00000604743 JMYQ8N9B5 988 aa17.87■□□□□ 0.45
TUBE1-208ENST00000604743 PCDHAC2Q9Y5I4 1007 aa17.87■□□□□ 0.45
TUBE1-208ENST00000604743 ARAP2Q8WZ64 1704 aa17.86■□□□□ 0.45
TUBE1-208ENST00000604743 ECM29Q5VYK3 1845 aa17.86■□□□□ 0.45
TUBE1-208ENST00000604743 TIMM10P62072 90 aa17.86■□□□□ 0.45
TUBE1-208ENST00000604743 ATP8B2P98198 1209 aa17.86■□□□□ 0.45
TUBE1-208ENST00000604743 CFAP100Q494V2 611 aa17.86■□□□□ 0.45
TUBE1-208ENST00000604743 CDCA5Q96FF9 252 aa17.86■□□□□ 0.45
TUBE1-208ENST00000604743 TTF2Q9UNY4 1162 aaKnown RBP17.86■□□□□ 0.45
TUBE1-208ENST00000604743 COG6Q9Y2V7 657 aa17.86■□□□□ 0.45
TUBE1-208ENST00000604743 TLL2Q9Y6L7 1015 aa17.86■□□□□ 0.45
TUBE1-208ENST00000604743 RASSF10A6NK89 507 aa17.85■□□□□ 0.45
TUBE1-208ENST00000604743 ADORA1P30542 326 aa17.85■□□□□ 0.45
TUBE1-208ENST00000604743 GRIK5Q16478 980 aa17.85■□□□□ 0.45
TUBE1-208ENST00000604743 PRAMEF18Q5VWM3 479 aa17.85■□□□□ 0.45
TUBE1-208ENST00000604743 PITPNM2Q9BZ72 1349 aa17.85■□□□□ 0.45
TUBE1-208ENST00000604743 OS9Q13438 667 aaPredicted RBP17.84■□□□□ 0.45
TUBE1-208ENST00000604743 MVPQ14764 893 aaKnown RBP17.84■□□□□ 0.45
TUBE1-208ENST00000604743 CYP4F22Q6NT55 531 aa17.84■□□□□ 0.45
TUBE1-208ENST00000604743 SAPCD2Q86UD0 394 aa17.84■□□□□ 0.45
TUBE1-208ENST00000604743 TBC1D22AQ8WUA7 517 aa17.84■□□□□ 0.45
TUBE1-208ENST00000604743 NEUROD6Q96NK8 337 aa17.84■□□□□ 0.45
TUBE1-208ENST00000604743 GNL3LQ9NVN8 582 aaKnown RBP17.84■□□□□ 0.45
TUBE1-208ENST00000604743 AKAP2Q9Y2D5 859 aa17.84■□□□□ 0.45
TUBE1-208ENST00000604743 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.84■□□□□ 0.45
TUBE1-208ENST00000604743 PCNTO95613 3336 aa17.83■□□□□ 0.45
TUBE1-208ENST00000604743 WDR33Q9C0J8 1336 aaKnown RBP17.83■□□□□ 0.44
TUBE1-208ENST00000604743 A0A1B0GUL7 405 aa17.83■□□□□ 0.44
TUBE1-208ENST00000604743 CLRN2A0PK11 232 aa17.83■□□□□ 0.44
TUBE1-208ENST00000604743 SURF6O75683 361 aaKnown RBP17.83■□□□□ 0.44
TUBE1-208ENST00000604743 PHKA1P46020 1223 aa17.83■□□□□ 0.44
TUBE1-208ENST00000604743 POLA2Q14181 598 aa17.83■□□□□ 0.44
TUBE1-208ENST00000604743 C2orf69Q8N8R5 385 aa17.83■□□□□ 0.44
TUBE1-208ENST00000604743 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.83■□□□□ 0.44
TUBE1-208ENST00000604743 SSH3Q8TE77 659 aa17.83■□□□□ 0.44
TUBE1-208ENST00000604743 ZBED3Q96IU2 234 aaPredicted RBP17.83■□□□□ 0.44
TUBE1-208ENST00000604743 PRMT6Q96LA8 375 aaPredicted RBP17.83■□□□□ 0.44
TUBE1-208ENST00000604743 GBA2Q9HCG7 927 aaPredicted RBP17.83■□□□□ 0.44
TUBE1-208ENST00000604743 MYO1BO43795 1136 aa17.82■□□□□ 0.44
TUBE1-208ENST00000604743 HUNKP57058 714 aa17.82■□□□□ 0.44
TUBE1-208ENST00000604743 MTMR14Q8NCE2 650 aa17.82■□□□□ 0.44
TUBE1-208ENST00000604743 XAGE2Q96GT9 111 aa17.82■□□□□ 0.44
TUBE1-208ENST00000604743 CAPNS2Q96L46 248 aa17.82■□□□□ 0.44
TUBE1-208ENST00000604743 VEZTQ9HBM0 779 aa17.82■□□□□ 0.44
TUBE1-208ENST00000604743 AOX1Q06278 1338 aa17.81■□□□□ 0.44
TUBE1-208ENST00000604743 SPDYE2BA6NHP3 402 aa17.81■□□□□ 0.44
TUBE1-208ENST00000604743 SPDYE6P0CI01 402 aa17.81■□□□□ 0.44
TUBE1-208ENST00000604743 CRKP46108 304 aa17.81■□□□□ 0.44
TUBE1-208ENST00000604743 C20orf194Q5TEA3 1177 aa17.81■□□□□ 0.44
TUBE1-208ENST00000604743 CCDC102BQ68D86 513 aa17.81■□□□□ 0.44
TUBE1-208ENST00000604743 CEP85Q6P2H3 762 aa17.81■□□□□ 0.44
TUBE1-208ENST00000604743 APOBEC3FQ8IUX4 373 aaKnown RBP17.81■□□□□ 0.44
TUBE1-208ENST00000604743 DDX19BQ9UMR2 479 aa17.81■□□□□ 0.44
TUBE1-208ENST00000604743 ECE1P42892 770 aa17.8■□□□□ 0.44
TUBE1-208ENST00000604743 GORABQ5T7V8 394 aa17.8■□□□□ 0.44
TUBE1-208ENST00000604743 WDR66Q8TBY9 1149 aa17.8■□□□□ 0.44
TUBE1-208ENST00000604743 SERPINA10Q9UK55 444 aa17.8■□□□□ 0.44
TUBE1-208ENST00000604743 COL1A1P02452 1464 aaPredicted RBP17.8■□□□□ 0.44
TUBE1-208ENST00000604743 HSPA1AP0DMV8 641 aaKnown RBP17.79■□□□□ 0.44
TUBE1-208ENST00000604743 HSPA1BP0DMV9 641 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms