RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 SSH1Q8WYL5 1049 aa19.14■□□□□ 0.65
TGFB1-202ENST00000597453 CSRNP1Q96S65 589 aa19.14■□□□□ 0.65
TGFB1-202ENST00000597453 PUS3Q9BZE2 481 aaKnown RBP19.14■□□□□ 0.65
TGFB1-202ENST00000597453 RNF186Q9NXI6 227 aa19.14■□□□□ 0.65
TGFB1-202ENST00000597453 PCDHAC2Q9Y5I4 1007 aa19.14■□□□□ 0.65
TGFB1-202ENST00000597453 APOBEC3FQ8IUX4 373 aaKnown RBP19.13■□□□□ 0.65
TGFB1-202ENST00000597453 SAGE1Q9NXZ1 904 aa19.13■□□□□ 0.65
TGFB1-202ENST00000597453 ARAP2Q8WZ64 1704 aa19.12■□□□□ 0.65
TGFB1-202ENST00000597453 F8W031 263 aaPredicted RBP19.12■□□□□ 0.65
TGFB1-202ENST00000597453 TRPA1O75762 1119 aa19.12■□□□□ 0.65
TGFB1-202ENST00000597453 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
TGFB1-202ENST00000597453 MCOLN1Q9GZU1 580 aa19.12■□□□□ 0.65
TGFB1-202ENST00000597453 BICC1Q9H694 974 aaKnown RBP19.12■□□□□ 0.65
TGFB1-202ENST00000597453 PTPRCP08575 1304 aa19.11■□□□□ 0.65
TGFB1-202ENST00000597453 TTLL12Q14166 644 aaPredicted RBP19.11■□□□□ 0.65
TGFB1-202ENST00000597453 DLGAP5Q15398 846 aa19.11■□□□□ 0.65
TGFB1-202ENST00000597453 RABL6Q3YEC7 729 aaPredicted RBP19.11■□□□□ 0.65
TGFB1-202ENST00000597453 ANKRD44Q8N8A2 993 aa19.11■□□□□ 0.65
TGFB1-202ENST00000597453 MTMR14Q8NCE2 650 aa19.11■□□□□ 0.65
TGFB1-202ENST00000597453 CDCA7LQ96GN5 454 aa19.11■□□□□ 0.65
TGFB1-202ENST00000597453 AOX1Q06278 1338 aa19.1■□□□□ 0.65
TGFB1-202ENST00000597453 GYG1P46976 350 aa19.1■□□□□ 0.65
TGFB1-202ENST00000597453 FKBP1AP62942 108 aaKnown RBP19.1■□□□□ 0.65
TGFB1-202ENST00000597453 PRKG1Q13976 671 aa19.1■□□□□ 0.65
TGFB1-202ENST00000597453 CFAP100Q494V2 611 aa19.1■□□□□ 0.65
TGFB1-202ENST00000597453 COL1A1P02452 1464 aaPredicted RBP19.09■□□□□ 0.65
TGFB1-202ENST00000597453 FAM205AQ6ZU69 1335 aa19.09■□□□□ 0.65
TGFB1-202ENST00000597453 CCDC85CA6NKD9 419 aa19.09■□□□□ 0.65
TGFB1-202ENST00000597453 NF2P35240 595 aa19.09■□□□□ 0.65
TGFB1-202ENST00000597453 DGKZQ13574 1117 aa19.09■□□□□ 0.65
TGFB1-202ENST00000597453 UBE4AQ14139 1066 aa19.09■□□□□ 0.65
TGFB1-202ENST00000597453 FZD1Q9UP38 647 aa19.09■□□□□ 0.65
TGFB1-202ENST00000597453 RIPOR2Q9Y4F9 1068 aa19.09■□□□□ 0.65
TGFB1-202ENST00000597453 SSC5DA1L4H1 1573 aa19.09■□□□□ 0.65
TGFB1-202ENST00000597453 SPDYE2BA6NHP3 402 aa19.08■□□□□ 0.64
TGFB1-202ENST00000597453 SPDYE6P0CI01 402 aa19.08■□□□□ 0.64
TGFB1-202ENST00000597453 LRRC24Q50LG9 513 aa19.08■□□□□ 0.64
TGFB1-202ENST00000597453 TDRD7Q8NHU6 1098 aaKnown RBP19.08■□□□□ 0.64
TGFB1-202ENST00000597453 FAM84BQ96KN1 310 aaPredicted RBP19.08■□□□□ 0.64
TGFB1-202ENST00000597453 PRMT6Q96LA8 375 aaPredicted RBP19.08■□□□□ 0.64
TGFB1-202ENST00000597453 DEFB129Q9H1M3 183 aa19.08■□□□□ 0.64
TGFB1-202ENST00000597453 MROH5Q6ZUA9 1318 aa19.07■□□□□ 0.64
TGFB1-202ENST00000597453 CLRN2A0PK11 232 aa19.07■□□□□ 0.64
TGFB1-202ENST00000597453 HIBADHP31937 336 aaKnown RBP19.07■□□□□ 0.64
TGFB1-202ENST00000597453 PTPN12Q05209 780 aaKnown RBP19.07■□□□□ 0.64
TGFB1-202ENST00000597453 REM2Q8IYK8 340 aaPredicted RBP19.07■□□□□ 0.64
TGFB1-202ENST00000597453 KLHDC4Q8TBB5 520 aa19.07■□□□□ 0.64
TGFB1-202ENST00000597453 USP44Q9H0E7 712 aa19.07■□□□□ 0.64
TGFB1-202ENST00000597453 MKRN3Q13064 507 aaKnown RBP19.06■□□□□ 0.64
TGFB1-202ENST00000597453 MFSD14BQ5SR56 506 aa19.06■□□□□ 0.64
TGFB1-202ENST00000597453 ARMC9Q7Z3E5 817 aa19.06■□□□□ 0.64
TGFB1-202ENST00000597453 ANGEL1Q9UNK9 670 aaKnown RBP19.06■□□□□ 0.64
TGFB1-202ENST00000597453 ALDH1L2Q3SY69 923 aa19.05■□□□□ 0.64
TGFB1-202ENST00000597453 LDLRAD1Q5T700 205 aa19.05■□□□□ 0.64
TGFB1-202ENST00000597453 TRMT2AQ8IZ69 625 aaKnown RBP19.05■□□□□ 0.64
TGFB1-202ENST00000597453 VGLL2Q8N8G2 317 aa19.05■□□□□ 0.64
TGFB1-202ENST00000597453 SMC4Q9NTJ3 1288 aa19.05■□□□□ 0.64
TGFB1-202ENST00000597453 RBM5P52756 815 aaKnown RBP eCLIP19.04■□□□□ 0.64
TGFB1-202ENST00000597453 METTL24Q5JXM2 366 aa19.04■□□□□ 0.64
TGFB1-202ENST00000597453 VEZTQ9HBM0 779 aa19.04■□□□□ 0.64
TGFB1-202ENST00000597453 IQSEC3Q9UPP2 1182 aaPredicted RBP19.04■□□□□ 0.64
TGFB1-202ENST00000597453 PPP2R3BQ9Y5P8 575 aa19.04■□□□□ 0.64
TGFB1-202ENST00000597453 MYO1BO43795 1136 aa19.03■□□□□ 0.64
TGFB1-202ENST00000597453 GRIK5Q16478 980 aa19.03■□□□□ 0.64
TGFB1-202ENST00000597453 FBXO33Q7Z6M2 555 aa19.03■□□□□ 0.64
TGFB1-202ENST00000597453 TTF2Q9UNY4 1162 aaKnown RBP19.03■□□□□ 0.64
TGFB1-202ENST00000597453 LAMB1P07942 1786 aa19.03■□□□□ 0.64
TGFB1-202ENST00000597453 OTOFQ9HC10 1997 aa19.02■□□□□ 0.64
TGFB1-202ENST00000597453 PDE8BO95263 885 aa19.02■□□□□ 0.64
TGFB1-202ENST00000597453 TBC1D8O95759 1140 aa19.02■□□□□ 0.64
TGFB1-202ENST00000597453 TM4SF4P48230 202 aa19.02■□□□□ 0.64
TGFB1-202ENST00000597453 NBPF12Q5TAG4 269 aaPredicted RBP19.02■□□□□ 0.64
TGFB1-202ENST00000597453 MYH13Q9UKX3 1938 aa19.02■□□□□ 0.63
TGFB1-202ENST00000597453 RFX5P48382 616 aaPredicted RBP19.01■□□□□ 0.63
TGFB1-202ENST00000597453 MAP3K11Q16584 847 aa19.01■□□□□ 0.63
TGFB1-202ENST00000597453 SPRYD7Q5W111 196 aa19.01■□□□□ 0.63
TGFB1-202ENST00000597453 CLMNQ96JQ2 1002 aa19.01■□□□□ 0.63
TGFB1-202ENST00000597453 SERPINA10Q9UK55 444 aa19.01■□□□□ 0.63
TGFB1-202ENST00000597453 CHAF1AQ13111 956 aaPredicted RBP19■□□□□ 0.63
TGFB1-202ENST00000597453 RASA3Q14644 834 aa19■□□□□ 0.63
TGFB1-202ENST00000597453 SPDYE2Q495Y8 402 aa19■□□□□ 0.63
TGFB1-202ENST00000597453 VPS37DQ86XT2 251 aa19■□□□□ 0.63
TGFB1-202ENST00000597453 TDRD3Q9H7E2 651 aaKnown RBP19■□□□□ 0.63
TGFB1-202ENST00000597453 ZBTB4Q9P1Z0 1013 aaPredicted RBP19■□□□□ 0.63
TGFB1-202ENST00000597453 ZNF70Q9UC06 446 aaPredicted RBP19■□□□□ 0.63
TGFB1-202ENST00000597453 FGFR2P21802 821 aa18.99■□□□□ 0.63
TGFB1-202ENST00000597453 CRKP46108 304 aa18.99■□□□□ 0.63
TGFB1-202ENST00000597453 BCAMP50895 628 aa18.99■□□□□ 0.63
TGFB1-202ENST00000597453 SUPT20HL1Q3ZLR7 823 aa18.99■□□□□ 0.63
TGFB1-202ENST00000597453 NOB1Q9ULX3 412 aaKnown RBP18.99■□□□□ 0.63
TGFB1-202ENST00000597453 EYA2O00167 538 aa18.98■□□□□ 0.63
TGFB1-202ENST00000597453 PPP1R12BO60237 982 aaPredicted RBP18.98■□□□□ 0.63
TGFB1-202ENST00000597453 RGS19P49795 217 aa18.98■□□□□ 0.63
TGFB1-202ENST00000597453 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
TGFB1-202ENST00000597453 SREBF2Q12772 1141 aa18.98■□□□□ 0.63
TGFB1-202ENST00000597453 CAVIN4Q5BKX8 364 aa18.98■□□□□ 0.63
TGFB1-202ENST00000597453 CTU1Q7Z7A3 348 aaKnown RBP18.98■□□□□ 0.63
TGFB1-202ENST00000597453 CDAN1Q8IWY9 1227 aa18.98■□□□□ 0.63
TGFB1-202ENST00000597453 DZIP1LQ8IYY4 767 aaKnown RBP18.98■□□□□ 0.63
TGFB1-202ENST00000597453 ZNF296Q8WUU4 475 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms