RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 FZD6O60353 706 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 STAU1O95793 577 aaKnown RBP5.59□□□□□ -1.51
LINC00649-204ENST00000593977 LDHBP07195 334 aaKnown RBP5.59□□□□□ -1.51
LINC00649-204ENST00000593977 HSD3B2P26439 372 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 GRM5P41594 1212 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 RPIAP49247 311 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 SMTNP53814 917 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 ATP2B2Q01814 1243 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 COX20Q5RI15 118 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 RNF187Q5TA31 235 aaPredicted RBP5.59□□□□□ -1.51
LINC00649-204ENST00000593977 SLC9A9Q8IVB4 645 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 NLGN2Q8NFZ4 835 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 ALKBH8Q96BT7 664 aaKnown RBP5.59□□□□□ -1.51
LINC00649-204ENST00000593977 ZNF775Q96BV0 537 aaPredicted RBP5.59□□□□□ -1.51
LINC00649-204ENST00000593977 MYO19Q96H55 970 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 PCDH12Q9NPG4 1184 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 METTL5Q9NRN9 209 aaKnown RBP5.59□□□□□ -1.51
LINC00649-204ENST00000593977 TMPRSS4Q9NRS4 437 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 RNF19AQ9NV58 838 aa5.59□□□□□ -1.51
LINC00649-204ENST00000593977 MRPL42Q9Y6G3 142 aaKnown RBP5.59□□□□□ -1.51
LINC00649-204ENST00000593977 CCNB3Q8WWL7 1395 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 SPATA31A3Q5VYP0 1347 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 RNF223E7ERA6 249 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 PPEF1O14829 653 aaPredicted RBP5.58□□□□□ -1.52
LINC00649-204ENST00000593977 LILRA1O75019 489 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 EHHADHQ08426 723 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 NR5A1Q13285 461 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 GNL2Q13823 731 aaKnown RBP5.58□□□□□ -1.52
LINC00649-204ENST00000593977 SLC15A2Q16348 729 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 SPTY2D1Q68D10 685 aaPredicted RBP5.58□□□□□ -1.52
LINC00649-204ENST00000593977 FILIP1Q7Z7B0 1213 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 CCDC116Q8IYX3 515 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 RPUSD2Q8IZ73 545 aaKnown RBP5.58□□□□□ -1.52
LINC00649-204ENST00000593977 NBPF15Q8N660 670 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.58□□□□□ -1.52
LINC00649-204ENST00000593977 EVI5LQ96CN4 794 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 FAM129BQ96TA1 746 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 MRS2Q9HD23 443 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 PRDM10Q9NQV6 1147 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 CCDC87Q9NVE4 849 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 IFT57Q9NWB7 429 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 PARP2Q9UGN5 583 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.58□□□□□ -1.52
LINC00649-204ENST00000593977 PLCH1Q4KWH8 1693 aa5.58□□□□□ -1.52
LINC00649-204ENST00000593977 EIF2AK4Q9P2K8 1649 aaKnown RBP5.58□□□□□ -1.52
LINC00649-204ENST00000593977 XRN1Q8IZH2 1706 aaKnown RBP5.57□□□□□ -1.52
LINC00649-204ENST00000593977 A0A0C4DFX4 3053 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 PTPN23Q9H3S7 1636 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 CDK2AP1O14519 115 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 U2SURPO15042 1029 aaKnown RBP5.57□□□□□ -1.52
LINC00649-204ENST00000593977 SORBS3O60504 671 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 CD2BP2O95400 341 aaKnown RBP5.57□□□□□ -1.52
LINC00649-204ENST00000593977 ADH1CP00326 375 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 IGHA2P01877 340 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 ZNF76P36508 570 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 USP5P45974 858 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 MAPK8P45983 427 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 HIRAP54198 1017 aaPredicted RBP5.57□□□□□ -1.52
LINC00649-204ENST00000593977 ARID5AQ03989 594 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 RALBP1Q15311 655 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 PPP1R26Q5T8A7 1209 aaPredicted RBP5.57□□□□□ -1.52
LINC00649-204ENST00000593977 RC3H1Q5TC82 1133 aaKnown RBP5.57□□□□□ -1.52
LINC00649-204ENST00000593977 SOGA3Q5TF21 947 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 TMC4Q7Z404 712 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 IRF2BPLQ9H1B7 796 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 PGPEP1Q9NXJ5 209 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 BTG4Q9NY30 223 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 G3BP2Q9UN86 482 aaKnown RBP5.57□□□□□ -1.52
LINC00649-204ENST00000593977 CCDC141Q6ZP82 1450 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 FYCO1Q9BQS8 1478 aa5.57□□□□□ -1.52
LINC00649-204ENST00000593977 MAFGO15525 162 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 CREB3O43889 395 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 ITGBL1O95965 494 aaPredicted RBP5.56□□□□□ -1.52
LINC00649-204ENST00000593977 KCNC4Q03721 635 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 TBCELQ5QJ74 424 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 PLA2G2CQ5R387 149 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 ALG1LQ6GMV1 187 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 STAG1Q8WVM7 1258 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 XAGE2Q96GT9 111 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 SGSM3Q96HU1 749 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 DUSP9Q99956 384 aaKnown RBP5.56□□□□□ -1.52
LINC00649-204ENST00000593977 SPOCK3Q9BQ16 436 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 STK32BQ9NY57 414 aa5.56□□□□□ -1.52
LINC00649-204ENST00000593977 NALCNQ8IZF0 1738 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 GPR182O15218 404 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 FOXN1O15353 648 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 PPFIA4O75335 1185 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 EIF3JO75822 258 aaKnown RBP5.55□□□□□ -1.52
LINC00649-204ENST00000593977 DAB2P98082 770 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 FSTL1Q12841 308 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 PSMD2Q13200 908 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 FAM50AQ14320 339 aaKnown RBP5.55□□□□□ -1.52
LINC00649-204ENST00000593977 TLR1Q15399 786 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 FOXD4L6Q3SYB3 417 aaPredicted RBP5.55□□□□□ -1.52
LINC00649-204ENST00000593977 FOXD4L3Q6VB84 417 aaPredicted RBP5.55□□□□□ -1.52
LINC00649-204ENST00000593977 CCDC146Q8IYE0 955 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 ARHGEF10LQ9HCE6 1279 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 TERF2IPQ9NYB0 399 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 VTI1BQ9UEU0 232 aa5.55□□□□□ -1.52
LINC00649-204ENST00000593977 LRFN2Q9ULH4 789 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms