RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 DEFB115Q30KQ5 88 aa23.07■■□□□ 1.28
SHKBP1-202ENST00000593764 ANGEL2Q5VTE6 544 aaKnown RBP23.07■■□□□ 1.28
SHKBP1-202ENST00000593764 SIL1Q9H173 461 aa23.07■■□□□ 1.28
SHKBP1-202ENST00000593764 COPRSQ9NQ92 184 aa23.07■■□□□ 1.28
SHKBP1-202ENST00000593764 JAG2Q9Y219 1238 aa23.07■■□□□ 1.28
SHKBP1-202ENST00000593764 PUM3Q15397 648 aaKnown RBP23.06■■□□□ 1.28
SHKBP1-202ENST00000593764 TLL2Q9Y6L7 1015 aa23.06■■□□□ 1.28
SHKBP1-202ENST00000593764 GNAI2P04899 355 aa23.05■■□□□ 1.28
SHKBP1-202ENST00000593764 DZIP1LQ8IYY4 767 aaKnown RBP23.05■■□□□ 1.28
SHKBP1-202ENST00000593764 ZBED3Q96IU2 234 aaPredicted RBP23.05■■□□□ 1.28
SHKBP1-202ENST00000593764 ZNF408Q9H9D4 720 aa23.05■■□□□ 1.28
SHKBP1-202ENST00000593764 SRGAP3O43295 1099 aa23.04■■□□□ 1.28
SHKBP1-202ENST00000593764 BCAMP50895 628 aa23.04■■□□□ 1.28
SHKBP1-202ENST00000593764 SAPCD2Q86UD0 394 aa23.04■■□□□ 1.28
SHKBP1-202ENST00000593764 SULF1Q8IWU6 871 aa23.04■■□□□ 1.28
SHKBP1-202ENST00000593764 HDAC9Q9UKV0 1011 aa23.04■■□□□ 1.28
SHKBP1-202ENST00000593764 PITPNM2Q9BZ72 1349 aa23.04■■□□□ 1.28
SHKBP1-202ENST00000593764 CAVIN4Q5BKX8 364 aa23.03■■□□□ 1.28
SHKBP1-202ENST00000593764 LPIN2Q92539 896 aa23.03■■□□□ 1.28
SHKBP1-202ENST00000593764 SCAF8Q9UPN6 1271 aaKnown RBP23.03■■□□□ 1.28
SHKBP1-202ENST00000593764 IQSEC3Q9UPP2 1182 aaPredicted RBP23.03■■□□□ 1.28
SHKBP1-202ENST00000593764 IFIT1P09914 478 aaKnown RBP23.02■■□□□ 1.28
SHKBP1-202ENST00000593764 IL15P40933 162 aaPredicted RBP23.02■■□□□ 1.28
SHKBP1-202ENST00000593764 VPS37DQ86XT2 251 aa23.02■■□□□ 1.28
SHKBP1-202ENST00000593764 FTSJ3Q8IY81 847 aaKnown RBP23.02■■□□□ 1.28
SHKBP1-202ENST00000593764 CEP126Q9P2H0 1117 aa23.02■■□□□ 1.28
SHKBP1-202ENST00000593764 PNMA6EA0A0J9YXQ4 647 aa23.01■■□□□ 1.27
SHKBP1-202ENST00000593764 F8W031 263 aaPredicted RBP23.01■■□□□ 1.27
SHKBP1-202ENST00000593764 ZBTB7BO15156 539 aaPredicted RBP23.01■■□□□ 1.27
SHKBP1-202ENST00000593764 MFSD14BQ5SR56 506 aa23.01■■□□□ 1.27
SHKBP1-202ENST00000593764 MTMR14Q8NCE2 650 aa23.01■■□□□ 1.27
SHKBP1-202ENST00000593764 PCDHAC2Q9Y5I4 1007 aa23.01■■□□□ 1.27
SHKBP1-202ENST00000593764 SLC5A1P13866 664 aa23■■□□□ 1.27
SHKBP1-202ENST00000593764 CDCA5Q96FF9 252 aa23■■□□□ 1.27
SHKBP1-202ENST00000593764 WDR33Q9C0J8 1336 aaKnown RBP23■■□□□ 1.27
SHKBP1-202ENST00000593764 DLGAP5Q15398 846 aa22.99■■□□□ 1.27
SHKBP1-202ENST00000593764 CYP4F22Q6NT55 531 aa22.99■■□□□ 1.27
SHKBP1-202ENST00000593764 ITPRIPQ8IWB1 547 aa22.99■■□□□ 1.27
SHKBP1-202ENST00000593764 HHIPL1Q96JK4 782 aa22.99■■□□□ 1.27
SHKBP1-202ENST00000593764 GRIK5Q16478 980 aa22.98■■□□□ 1.27
SHKBP1-202ENST00000593764 ATP2B3Q16720 1220 aa22.98■■□□□ 1.27
SHKBP1-202ENST00000593764 CFAP100Q494V2 611 aa22.98■■□□□ 1.27
SHKBP1-202ENST00000593764 PANK1Q8TE04 598 aa22.98■■□□□ 1.27
SHKBP1-202ENST00000593764 CAPNS2Q96L46 248 aa22.98■■□□□ 1.27
SHKBP1-202ENST00000593764 GBA2Q9HCG7 927 aaPredicted RBP22.98■■□□□ 1.27
SHKBP1-202ENST00000593764 HSPA1AP0DMV8 641 aaKnown RBP22.97■■□□□ 1.27
SHKBP1-202ENST00000593764 HSPA1BP0DMV9 641 aaKnown RBP22.97■■□□□ 1.27
SHKBP1-202ENST00000593764 CHAF1AQ13111 956 aaPredicted RBP22.97■■□□□ 1.27
SHKBP1-202ENST00000593764 PRMT6Q96LA8 375 aaPredicted RBP22.97■■□□□ 1.27
SHKBP1-202ENST00000593764 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.97■■□□□ 1.27
SHKBP1-202ENST00000593764 SPDYE2BA6NHP3 402 aa22.96■■□□□ 1.27
SHKBP1-202ENST00000593764 FRAT2O75474 233 aaPredicted RBP22.96■■□□□ 1.27
SHKBP1-202ENST00000593764 SPDYE6P0CI01 402 aa22.96■■□□□ 1.27
SHKBP1-202ENST00000593764 PRAMEF18Q5VWM3 479 aa22.96■■□□□ 1.27
SHKBP1-202ENST00000593764 RCAN3Q9UKA8 241 aa22.96■■□□□ 1.27
SHKBP1-202ENST00000593764 TTF2Q9UNY4 1162 aaKnown RBP22.96■■□□□ 1.27
SHKBP1-202ENST00000593764 AOX1Q06278 1338 aa22.96■■□□□ 1.27
SHKBP1-202ENST00000593764 ECE1P42892 770 aa22.95■■□□□ 1.26
SHKBP1-202ENST00000593764 HUNKP57058 714 aa22.95■■□□□ 1.26
SHKBP1-202ENST00000593764 ATP8B2P98198 1209 aa22.95■■□□□ 1.26
SHKBP1-202ENST00000593764 TFCP2Q12800 502 aa22.95■■□□□ 1.26
SHKBP1-202ENST00000593764 POLA2Q14181 598 aa22.95■■□□□ 1.26
SHKBP1-202ENST00000593764 C2orf69Q8N8R5 385 aa22.95■■□□□ 1.26
SHKBP1-202ENST00000593764 TBC1D22AQ8WUA7 517 aa22.95■■□□□ 1.26
SHKBP1-202ENST00000593764 C1orf115Q9H7X2 142 aa22.95■■□□□ 1.26
SHKBP1-202ENST00000593764 TIMM10P62072 90 aa22.94■■□□□ 1.26
SHKBP1-202ENST00000593764 PAXIP1Q6ZW49 1069 aaPredicted RBP22.94■■□□□ 1.26
SHKBP1-202ENST00000593764 SERPINA10Q9UK55 444 aa22.94■■□□□ 1.26
SHKBP1-202ENST00000593764 ADORA1P30542 326 aa22.93■■□□□ 1.26
SHKBP1-202ENST00000593764 APOBEC3FQ8IUX4 373 aaKnown RBP22.93■■□□□ 1.26
SHKBP1-202ENST00000593764 SSH3Q8TE77 659 aa22.93■■□□□ 1.26
SHKBP1-202ENST00000593764 WBP1LQ9NX94 342 aa22.93■■□□□ 1.26
SHKBP1-202ENST00000593764 PHKA1P46020 1223 aa22.92■■□□□ 1.26
SHKBP1-202ENST00000593764 RBM5P52756 815 aaKnown RBP eCLIP22.92■■□□□ 1.26
SHKBP1-202ENST00000593764 GRM1Q13255 1194 aa22.92■■□□□ 1.26
SHKBP1-202ENST00000593764 COL1A1P02452 1464 aaPredicted RBP22.92■■□□□ 1.26
SHKBP1-202ENST00000593764 ARAP2Q8WZ64 1704 aa22.91■■□□□ 1.26
SHKBP1-202ENST00000593764 CLRN2A0PK11 232 aa22.91■■□□□ 1.26
SHKBP1-202ENST00000593764 AOC2O75106 756 aa22.91■■□□□ 1.26
SHKBP1-202ENST00000593764 A0A1B0GUL7 405 aa22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 ZBTB22O15209 634 aa22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 MS4A1P11836 297 aa22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 CRKP46108 304 aa22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 HDLBPQ00341 1268 aaKnown RBP22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 G3BP1Q13283 466 aaKnown RBP eCLIP22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 CCDC102BQ68D86 513 aa22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 WDR66Q8TBY9 1149 aa22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 DEFB129Q9H1M3 183 aa22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 AKAP2Q9Y2D5 859 aa22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 SUGT1Q9Y2Z0 365 aa22.9■■□□□ 1.26
SHKBP1-202ENST00000593764 FAM155AB1AL88 458 aaPredicted RBP22.89■■□□□ 1.25
SHKBP1-202ENST00000593764 MYO1BO43795 1136 aa22.89■■□□□ 1.25
SHKBP1-202ENST00000593764 MAP2K2P36507 400 aa22.89■■□□□ 1.25
SHKBP1-202ENST00000593764 FKBP1BP68106 108 aa22.89■■□□□ 1.25
SHKBP1-202ENST00000593764 RGMBQ6NW40 437 aa22.89■■□□□ 1.25
SHKBP1-202ENST00000593764 MOB2Q70IA6 237 aa22.89■■□□□ 1.25
SHKBP1-202ENST00000593764 XAGE2Q96GT9 111 aa22.89■■□□□ 1.25
SHKBP1-202ENST00000593764 MRIQ9BWK5 157 aa22.89■■□□□ 1.25
SHKBP1-202ENST00000593764 GNL3LQ9NVN8 582 aaKnown RBP22.89■■□□□ 1.25
SHKBP1-202ENST00000593764 THSD7BQ9C0I4 1608 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms