RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 PUS3Q9BZE2 481 aaKnown RBP17.04■□□□□ 0.32
CAPNS1-213ENST00000592354 TRPA1O75762 1119 aa17.03■□□□□ 0.32
CAPNS1-213ENST00000592354 DLGAP5Q15398 846 aa17.03■□□□□ 0.32
CAPNS1-213ENST00000592354 SSH1Q8WYL5 1049 aa17.03■□□□□ 0.32
CAPNS1-213ENST00000592354 ZBED3Q96IU2 234 aaPredicted RBP17.03■□□□□ 0.32
CAPNS1-213ENST00000592354 MCOLN1Q9GZU1 580 aa17.03■□□□□ 0.32
CAPNS1-213ENST00000592354 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
CAPNS1-213ENST00000592354 COL1A1P02452 1464 aaPredicted RBP17.03■□□□□ 0.32
CAPNS1-213ENST00000592354 SSC5DA1L4H1 1573 aa17.02■□□□□ 0.32
CAPNS1-213ENST00000592354 UTYO14607 1347 aa17.02■□□□□ 0.32
CAPNS1-213ENST00000592354 CCDC85CA6NKD9 419 aa17.02■□□□□ 0.32
CAPNS1-213ENST00000592354 NF2P35240 595 aa17.02■□□□□ 0.32
CAPNS1-213ENST00000592354 GYG1P46976 350 aa17.02■□□□□ 0.32
CAPNS1-213ENST00000592354 MKRN3Q13064 507 aaKnown RBP17.02■□□□□ 0.32
CAPNS1-213ENST00000592354 CSRNP1Q96S65 589 aa17.02■□□□□ 0.32
CAPNS1-213ENST00000592354 RNF186Q9NXI6 227 aa17.02■□□□□ 0.32
CAPNS1-213ENST00000592354 SAGE1Q9NXZ1 904 aa17.02■□□□□ 0.32
CAPNS1-213ENST00000592354 FZD1Q9UP38 647 aa17.02■□□□□ 0.32
CAPNS1-213ENST00000592354 OTOFQ9HC10 1997 aa17.02■□□□□ 0.31
CAPNS1-213ENST00000592354 MYH13Q9UKX3 1938 aa17.02■□□□□ 0.31
CAPNS1-213ENST00000592354 PTPRCP08575 1304 aa17.01■□□□□ 0.31
CAPNS1-213ENST00000592354 AOX1Q06278 1338 aa17.01■□□□□ 0.31
CAPNS1-213ENST00000592354 CLRN2A0PK11 232 aa17.01■□□□□ 0.31
CAPNS1-213ENST00000592354 MMP14P50281 582 aa17.01■□□□□ 0.31
CAPNS1-213ENST00000592354 SLFN5Q08AF3 891 aa17.01■□□□□ 0.31
CAPNS1-213ENST00000592354 DGKZQ13574 1117 aa17.01■□□□□ 0.31
CAPNS1-213ENST00000592354 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
CAPNS1-213ENST00000592354 CDCA7LQ96GN5 454 aa17.01■□□□□ 0.31
CAPNS1-213ENST00000592354 CFAP100Q494V2 611 aa17■□□□□ 0.31
CAPNS1-213ENST00000592354 LAMB1P07942 1786 aa17■□□□□ 0.31
CAPNS1-213ENST00000592354 RABL6Q3YEC7 729 aaPredicted RBP16.99■□□□□ 0.31
CAPNS1-213ENST00000592354 LRRC24Q50LG9 513 aa16.99■□□□□ 0.31
CAPNS1-213ENST00000592354 KLHDC4Q8TBB5 520 aa16.99■□□□□ 0.31
CAPNS1-213ENST00000592354 SMC4Q9NTJ3 1288 aa16.99■□□□□ 0.31
CAPNS1-213ENST00000592354 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.99■□□□□ 0.31
CAPNS1-213ENST00000592354 MROH5Q6ZUA9 1318 aa16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 SPDYE6P0CI01 402 aa16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 RBM5P52756 815 aaKnown RBP eCLIP16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 FKBP1AP62942 108 aaKnown RBP16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 PTPN12Q05209 780 aaKnown RBP16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 UBE4AQ14139 1066 aa16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 MFSD14BQ5SR56 506 aa16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 ARMC9Q7Z3E5 817 aa16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 MTMR14Q8NCE2 650 aa16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 DEFB129Q9H1M3 183 aa16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 VEZTQ9HBM0 779 aa16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 ANGEL1Q9UNK9 670 aaKnown RBP16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 IQSEC3Q9UPP2 1182 aaPredicted RBP16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 RIPOR2Q9Y4F9 1068 aa16.98■□□□□ 0.31
CAPNS1-213ENST00000592354 MYO1BO43795 1136 aa16.97■□□□□ 0.31
CAPNS1-213ENST00000592354 METTL24Q5JXM2 366 aa16.97■□□□□ 0.31
CAPNS1-213ENST00000592354 TDRD7Q8NHU6 1098 aaKnown RBP16.97■□□□□ 0.31
CAPNS1-213ENST00000592354 FAM84BQ96KN1 310 aaPredicted RBP16.97■□□□□ 0.31
CAPNS1-213ENST00000592354 PRMT6Q96LA8 375 aaPredicted RBP16.97■□□□□ 0.31
CAPNS1-213ENST00000592354 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.31
CAPNS1-213ENST00000592354 USP44Q9H0E7 712 aa16.96■□□□□ 0.31
CAPNS1-213ENST00000592354 TTF2Q9UNY4 1162 aaKnown RBP16.96■□□□□ 0.31
CAPNS1-213ENST00000592354 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
CAPNS1-213ENST00000592354 ALDH1L2Q3SY69 923 aa16.95■□□□□ 0.3
CAPNS1-213ENST00000592354 VPS37DQ86XT2 251 aa16.95■□□□□ 0.3
CAPNS1-213ENST00000592354 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
CAPNS1-213ENST00000592354 VGLL2Q8N8G2 317 aa16.95■□□□□ 0.3
CAPNS1-213ENST00000592354 TBC1D8O95759 1140 aa16.94■□□□□ 0.3
CAPNS1-213ENST00000592354 CLMNQ96JQ2 1002 aa16.94■□□□□ 0.3
CAPNS1-213ENST00000592354 PPP2R3BQ9Y5P8 575 aa16.94■□□□□ 0.3
CAPNS1-213ENST00000592354 GRIK5Q16478 980 aa16.93■□□□□ 0.3
CAPNS1-213ENST00000592354 LDLRAD1Q5T700 205 aa16.93■□□□□ 0.3
CAPNS1-213ENST00000592354 NBPF12Q5TAG4 269 aaPredicted RBP16.93■□□□□ 0.3
CAPNS1-213ENST00000592354 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
CAPNS1-213ENST00000592354 PDE8BO95263 885 aa16.92■□□□□ 0.3
CAPNS1-213ENST00000592354 RASA3Q14644 834 aa16.92■□□□□ 0.3
CAPNS1-213ENST00000592354 SPDYE2Q495Y8 402 aa16.92■□□□□ 0.3
CAPNS1-213ENST00000592354 CAVIN4Q5BKX8 364 aa16.92■□□□□ 0.3
CAPNS1-213ENST00000592354 TDRD3Q9H7E2 651 aaKnown RBP16.92■□□□□ 0.3
CAPNS1-213ENST00000592354 ZNF70Q9UC06 446 aaPredicted RBP16.92■□□□□ 0.3
CAPNS1-213ENST00000592354 PPP1R12BO60237 982 aaPredicted RBP16.91■□□□□ 0.3
CAPNS1-213ENST00000592354 CRKP46108 304 aa16.91■□□□□ 0.3
CAPNS1-213ENST00000592354 SREBF2Q12772 1141 aa16.91■□□□□ 0.3
CAPNS1-213ENST00000592354 SPRYD7Q5W111 196 aa16.91■□□□□ 0.3
CAPNS1-213ENST00000592354 FBXO33Q7Z6M2 555 aa16.91■□□□□ 0.3
CAPNS1-213ENST00000592354 CDAN1Q8IWY9 1227 aa16.91■□□□□ 0.3
CAPNS1-213ENST00000592354 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
CAPNS1-213ENST00000592354 SERPINA10Q9UK55 444 aa16.91■□□□□ 0.3
CAPNS1-213ENST00000592354 TCP10L2B9ZVM9 353 aa16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 UBTFL1P0CB47 393 aaPredicted RBP16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 TM4SF4P48230 202 aa16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 RFX5P48382 616 aaPredicted RBP16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 BCAMP50895 628 aa16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 PUM3Q15397 648 aaKnown RBP16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 SUPT20HL1Q3ZLR7 823 aa16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 DZIP1LQ8IYY4 767 aaKnown RBP16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 ZNF296Q8WUU4 475 aaPredicted RBP16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 SIL1Q9H173 461 aa16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 NOB1Q9ULX3 412 aaKnown RBP16.9■□□□□ 0.3
CAPNS1-213ENST00000592354 EYA2O00167 538 aa16.89■□□□□ 0.29
CAPNS1-213ENST00000592354 TNFAIP1Q13829 316 aa16.89■□□□□ 0.29
CAPNS1-213ENST00000592354 MAP3K11Q16584 847 aa16.89■□□□□ 0.29
CAPNS1-213ENST00000592354 CTU1Q7Z7A3 348 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms