RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 ST7Q9NRC1 585 aa18.7■□□□□ 0.58
GHDC-207ENST00000587427 ANO10Q9NW15 660 aa18.7■□□□□ 0.58
GHDC-207ENST00000587427 NHSQ6T4R5 1651 aa18.7■□□□□ 0.58
GHDC-207ENST00000587427 BECN2A8MW95 431 aa18.69■□□□□ 0.58
GHDC-207ENST00000587427 APBA3O96018 575 aa18.69■□□□□ 0.58
GHDC-207ENST00000587427 ATL3Q6DD88 541 aa18.69■□□□□ 0.58
GHDC-207ENST00000587427 Q6ZUG5 572 aa18.69■□□□□ 0.58
GHDC-207ENST00000587427 DEFB132Q7Z7B7 95 aa18.69■□□□□ 0.58
GHDC-207ENST00000587427 BTAF1O14981 1849 aa18.69■□□□□ 0.58
GHDC-207ENST00000587427 GSDMDP57764 484 aa18.69■□□□□ 0.58
GHDC-207ENST00000587427 SNW1Q13573 536 aaKnown RBP18.69■□□□□ 0.58
GHDC-207ENST00000587427 PROSER3Q2NL68 480 aa18.69■□□□□ 0.58
GHDC-207ENST00000587427 GOLPH3LQ9H4A5 285 aa18.69■□□□□ 0.58
GHDC-207ENST00000587427 U3KPZ7 1027 aaPredicted RBP18.69■□□□□ 0.58
GHDC-207ENST00000587427 SRCAPQ6ZRS2 3230 aa18.68■□□□□ 0.58
GHDC-207ENST00000587427 RFX7Q2KHR2 1363 aa18.68■□□□□ 0.58
GHDC-207ENST00000587427 HEG1Q9ULI3 1381 aa18.68■□□□□ 0.58
GHDC-207ENST00000587427 CCDC73Q6ZRK6 1079 aa18.68■□□□□ 0.58
GHDC-207ENST00000587427 FTOQ9C0B1 505 aaKnown RBP eCLIP18.68■□□□□ 0.58
GHDC-207ENST00000587427 ENGASEQ8NFI3 743 aa18.68■□□□□ 0.58
GHDC-207ENST00000587427 TMEM51Q9NW97 253 aa18.68■□□□□ 0.58
GHDC-207ENST00000587427 SIPA1L3O60292 1781 aaPredicted RBP18.68■□□□□ 0.58
GHDC-207ENST00000587427 COL15A1P39059 1388 aa18.67■□□□□ 0.58
GHDC-207ENST00000587427 PRAMEF22A3QJZ6 481 aa18.67■□□□□ 0.58
GHDC-207ENST00000587427 PFKFB2O60825 505 aa18.67■□□□□ 0.58
GHDC-207ENST00000587427 SLU7O95391 586 aaKnown RBP18.67■□□□□ 0.58
GHDC-207ENST00000587427 HSP90B1P14625 803 aaKnown RBP18.67■□□□□ 0.58
GHDC-207ENST00000587427 GTF2E1P29083 439 aaPredicted RBP18.67■□□□□ 0.58
GHDC-207ENST00000587427 ERCC4Q92889 916 aaPredicted RBP18.67■□□□□ 0.58
GHDC-207ENST00000587427 OSBPL5Q9H0X9 879 aaPredicted RBP18.67■□□□□ 0.58
GHDC-207ENST00000587427 KINO60870 393 aaKnown RBP18.67■□□□□ 0.58
GHDC-207ENST00000587427 FAM160A1Q05DH4 1040 aa18.67■□□□□ 0.58
GHDC-207ENST00000587427 SCRN1Q12765 414 aa18.67■□□□□ 0.58
GHDC-207ENST00000587427 CEP57L1Q8IYX8 460 aa18.67■□□□□ 0.58
GHDC-207ENST00000587427 FBXW7Q969H0 707 aa18.67■□□□□ 0.58
GHDC-207ENST00000587427 ZNF446Q9NWS9 450 aa18.67■□□□□ 0.58
GHDC-207ENST00000587427 FOSBP53539 338 aa18.66■□□□□ 0.58
GHDC-207ENST00000587427 FAM193AP78312 1265 aa18.66■□□□□ 0.58
GHDC-207ENST00000587427 EN1Q05925 392 aaPredicted RBP18.66■□□□□ 0.58
GHDC-207ENST00000587427 ZNF790Q6PG37 636 aa18.66■□□□□ 0.58
GHDC-207ENST00000587427 IMPACTQ9P2X3 320 aa18.66■□□□□ 0.58
GHDC-207ENST00000587427 ERICH4A6NGS2 130 aa18.66■□□□□ 0.58
GHDC-207ENST00000587427 ATP5JP18859 108 aa18.66■□□□□ 0.58
GHDC-207ENST00000587427 UPF1Q92900 1129 aaKnown RBP eCLIP18.66■□□□□ 0.582e-6■■■■□ 26.7
GHDC-207ENST00000587427 ZNF396Q96N95 335 aaPredicted RBP18.66■□□□□ 0.58
GHDC-207ENST00000587427 SLC4A9Q96Q91 983 aa18.66■□□□□ 0.58
GHDC-207ENST00000587427 NAT10Q9H0A0 1025 aaKnown RBP18.66■□□□□ 0.58
GHDC-207ENST00000587427 DDX58O95786 925 aaKnown RBP18.65■□□□□ 0.58
GHDC-207ENST00000587427 NSUN7Q8NE18 718 aaKnown RBP18.65■□□□□ 0.58
GHDC-207ENST00000587427 ZNF496Q96IT1 587 aaPredicted RBP18.65■□□□□ 0.58
GHDC-207ENST00000587427 SIL1Q9H173 461 aa18.65■□□□□ 0.58
GHDC-207ENST00000587427 PALLDQ8WX93 1383 aa18.65■□□□□ 0.58
GHDC-207ENST00000587427 EDC3Q96F86 508 aaKnown RBP18.64■□□□□ 0.58
GHDC-207ENST00000587427 TNS1Q9HBL0 1735 aaKnown RBP18.64■□□□□ 0.57
GHDC-207ENST00000587427 USP28Q96RU2 1077 aa18.64■□□□□ 0.57
GHDC-207ENST00000587427 L2HGDHQ9H9P8 463 aa18.64■□□□□ 0.57
GHDC-207ENST00000587427 CYP21A2P08686 494 aa18.63■□□□□ 0.57
GHDC-207ENST00000587427 HMGB1P09429 215 aaKnown RBP18.63■□□□□ 0.57
GHDC-207ENST00000587427 CREBRFQ8IUR6 639 aa18.63■□□□□ 0.57
GHDC-207ENST00000587427 PROM2Q8N271 834 aa18.63■□□□□ 0.57
GHDC-207ENST00000587427 LRRN4CLQ8ND94 238 aa18.63■□□□□ 0.57
GHDC-207ENST00000587427 NBPF11Q86T75 865 aa18.63■□□□□ 0.57
GHDC-207ENST00000587427 TTC5Q8N0Z6 440 aa18.63■□□□□ 0.57
GHDC-207ENST00000587427 AOPEPQ8N6M6 819 aa18.63■□□□□ 0.57
GHDC-207ENST00000587427 LRRC2Q9BYS8 371 aa18.63■□□□□ 0.57
GHDC-207ENST00000587427 CTDNEP1O95476 244 aa18.62■□□□□ 0.57
GHDC-207ENST00000587427 KCNJ6P48051 423 aa18.62■□□□□ 0.57
GHDC-207ENST00000587427 EZH2Q15910 746 aaKnown RBP18.62■□□□□ 0.57
GHDC-207ENST00000587427 ERCC6LQ2NKX8 1250 aa18.62■□□□□ 0.57
GHDC-207ENST00000587427 FSIP1Q8NA03 581 aa18.62■□□□□ 0.57
GHDC-207ENST00000587427 ZNF609O15014 1411 aa18.62■□□□□ 0.57
GHDC-207ENST00000587427 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
GHDC-207ENST00000587427 DHX8Q14562 1220 aaKnown RBP18.62■□□□□ 0.57
GHDC-207ENST00000587427 CCDC150Q8NCX0 1101 aa18.62■□□□□ 0.57
GHDC-207ENST00000587427 DDX21Q9NR30 783 aaKnown RBP eCLIP18.62■□□□□ 0.57
GHDC-207ENST00000587427 LRRC4BQ9NT99 713 aa18.62■□□□□ 0.57
GHDC-207ENST00000587427 CCDC66A2RUB6 948 aa18.61■□□□□ 0.57
GHDC-207ENST00000587427 PPFIA3O75145 1194 aa18.61■□□□□ 0.57
GHDC-207ENST00000587427 TUBB4AP04350 444 aa18.61■□□□□ 0.57
GHDC-207ENST00000587427 CHGBP05060 677 aa18.61■□□□□ 0.57
GHDC-207ENST00000587427 IGKV5-2P06315 115 aa18.61■□□□□ 0.57
GHDC-207ENST00000587427 H2AFXP16104 143 aaPredicted RBP18.61■□□□□ 0.57
GHDC-207ENST00000587427 MCMDC2Q4G0Z9 681 aa18.61■□□□□ 0.57
GHDC-207ENST00000587427 BPIFA3Q9BQP9 254 aa18.61■□□□□ 0.57
GHDC-207ENST00000587427 PSDA5PKW4 1024 aaPredicted RBP18.61■□□□□ 0.57
GHDC-207ENST00000587427 E4F1Q66K89 784 aaPredicted RBP18.61■□□□□ 0.57
GHDC-207ENST00000587427 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
GHDC-207ENST00000587427 FMR1NBQ8N0W7 255 aaPredicted RBP18.61■□□□□ 0.57
GHDC-207ENST00000587427 KLHDC4Q8TBB5 520 aa18.61■□□□□ 0.57
GHDC-207ENST00000587427 DBNLQ9UJU6 430 aaKnown RBP18.61■□□□□ 0.57
GHDC-207ENST00000587427 KCPQ6ZWJ8 1503 aa18.6■□□□□ 0.57
GHDC-207ENST00000587427 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
GHDC-207ENST00000587427 SIK1P57059 783 aa18.6■□□□□ 0.57
GHDC-207ENST00000587427 SF3B2Q13435 895 aaKnown RBP18.6■□□□□ 0.57
GHDC-207ENST00000587427 STOX1Q6ZVD7 989 aa18.6■□□□□ 0.57
GHDC-207ENST00000587427 AGXT2Q9BYV1 514 aa18.6■□□□□ 0.57
GHDC-207ENST00000587427 COPRSQ9NQ92 184 aa18.6■□□□□ 0.57
GHDC-207ENST00000587427 SALL1Q9NSC2 1324 aa18.6■□□□□ 0.57
GHDC-207ENST00000587427 PAPPAQ13219 1627 aa18.6■□□□□ 0.57
GHDC-207ENST00000587427 ME1P48163 572 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms