RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 ZKSCAN3Q9BRR0 538 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 PLVAPQ9BX97 442 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 BCO2Q9BYV7 579 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 ADAM19Q9H013 955 aa4.18□□□□□ -1.74
COPS3-213ENST00000577210 SMG9Q9H0W8 520 aaKnown RBP4.18□□□□□ -1.74
COPS3-213ENST00000577210 JPH1Q9HDC5 661 aaPredicted RBP4.18□□□□□ -1.74
COPS3-213ENST00000577210 METTL5Q9NRN9 209 aaKnown RBP4.18□□□□□ -1.74
COPS3-213ENST00000577210 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 FAM229AH3BQW9 127 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 J3QW42 95 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 ALBP02768 609 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 POLR3DP05423 398 aaPredicted RBP4.17□□□□□ -1.74
COPS3-213ENST00000577210 CDC27P30260 824 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 MLLT1Q03111 559 aaPredicted RBP4.17□□□□□ -1.74
COPS3-213ENST00000577210 PWP1Q13610 501 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 COL9A3Q14050 684 aaPredicted RBP4.17□□□□□ -1.74
COPS3-213ENST00000577210 GRM2Q14416 872 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 PERM1Q5SV97 790 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 PEAR1Q5VY43 1037 aaPredicted RBP4.17□□□□□ -1.74
COPS3-213ENST00000577210 C8orf86Q6ZUL3 223 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 WFDC8Q8IUA0 241 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 ASAP3Q8TDY4 903 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 EPS8L3Q8TE67 593 aaKnown RBP4.17□□□□□ -1.74
COPS3-213ENST00000577210 NXPE3Q969Y0 559 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 MRRFQ96E11 262 aaKnown RBP4.17□□□□□ -1.74
COPS3-213ENST00000577210 LPIN3Q9BQK8 851 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 SOX17Q9H6I2 414 aaPredicted RBP4.17□□□□□ -1.74
COPS3-213ENST00000577210 STARD13Q9Y3M8 1113 aa4.17□□□□□ -1.74
COPS3-213ENST00000577210 A0A096LPE4 126 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 A0A1W2PPZ6 126 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 M0R082 166 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 SCAMP3O14828 347 aaKnown RBP4.16□□□□□ -1.74
COPS3-213ENST00000577210 ITPKAP23677 461 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 RAC1P63000 192 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 DOC2BQ14184 412 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 MRPL58Q14197 206 aaKnown RBP4.16□□□□□ -1.74
COPS3-213ENST00000577210 TAF1CQ15572 869 aaPredicted RBP4.16□□□□□ -1.74
COPS3-213ENST00000577210 USPL1Q5W0Q7 1092 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 SCARA3Q6AZY7 606 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 NXPE4Q6UWF7 544 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 HFE2Q6ZVN8 426 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 KLHL23Q8NBE8 558 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 ZNF417Q8TAU3 575 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 ZNF587Q96SQ5 575 aaPredicted RBP4.16□□□□□ -1.74
COPS3-213ENST00000577210 NOC4LQ9BVI4 516 aaKnown RBP4.16□□□□□ -1.74
COPS3-213ENST00000577210 RASSF4Q9H2L5 321 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 CLEC4MQ9H2X3 399 aaPredicted RBP4.16□□□□□ -1.74
COPS3-213ENST00000577210 WWC3Q9ULE0 1092 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 PPME1Q9Y570 386 aa4.16□□□□□ -1.74
COPS3-213ENST00000577210 H3BRJ5 948 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 NFKBIEO00221 500 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 SPATA31C1P0DKV0 1188 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 PIP4K2BP78356 416 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 IKBKEQ14164 716 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 PRRT3Q5FWE3 981 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 COL13A1Q5TAT6 717 aaPredicted RBP4.15□□□□□ -1.75
COPS3-213ENST00000577210 MSL1Q68DK7 614 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 GDF6Q6KF10 455 aaPredicted RBP4.15□□□□□ -1.75
COPS3-213ENST00000577210 C20orf204Q6ZNR8 217 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 SV2BQ7L1I2 683 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 NUDT8Q8WV74 236 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 TCF12Q99081 682 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 POP1Q99575 1024 aaKnown RBP4.15□□□□□ -1.75
COPS3-213ENST00000577210 EMILIN2Q9BXX0 1053 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 ABCB6Q9NP58 842 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 OSGEPQ9NPF4 335 aa4.15□□□□□ -1.75
COPS3-213ENST00000577210 TTF2Q9UNY4 1162 aaKnown RBP4.15□□□□□ -1.75
COPS3-213ENST00000577210 CYP11A1P05108 521 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 USP17L7P0C7H9 530 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 LMNB1P20700 586 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 AFF1P51825 1210 aaKnown RBP4.14□□□□□ -1.75
COPS3-213ENST00000577210 FCGRTP55899 365 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 ATP11AP98196 1134 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 AP3B2Q13367 1082 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 IL22RA1Q8N6P7 574 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 TMEM87AQ8NBN3 555 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 NACC1Q96RE7 527 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 OSBPL7Q9BZF2 842 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 ZNF576Q9H609 170 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 SEC31BQ9NQW1 1179 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 TMEM39AQ9NV64 488 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 NAGPAQ9UK23 515 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 SOX13Q9UN79 622 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 AKAP2Q9Y2D5 859 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 USP31Q70CQ4 1352 aa4.14□□□□□ -1.75
COPS3-213ENST00000577210 B3GALT4O96024 378 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 NID1P14543 1247 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 ZNF76P36508 570 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 C19orf57Q0VDD7 668 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 TRIM28Q13263 835 aaKnown RBP4.13□□□□□ -1.75
COPS3-213ENST00000577210 LRRC14Q15048 493 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 TSNAXIP1Q2TAA8 658 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 TRAPPC3LQ5T215 181 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 HS2ST1Q7LGA3 356 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 GLIS3Q8NEA6 775 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 RNF34Q969K3 372 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 LATS2Q9NRM7 1088 aa4.13□□□□□ -1.75
COPS3-213ENST00000577210 GPN3Q9UHW5 284 aaPredicted RBP4.13□□□□□ -1.75
COPS3-213ENST00000577210 TCF3P15923 654 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms