RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 MTMR14Q8NCE2 650 aa21.9■■□□□ 1.1
SMG6-214ENST00000573827 API5Q9BZZ5 524 aaKnown RBP21.9■■□□□ 1.1
SMG6-214ENST00000573827 AOX1Q06278 1338 aa21.89■■□□□ 1.1
SMG6-214ENST00000573827 PTPN12Q05209 780 aaKnown RBP21.89■■□□□ 1.09
SMG6-214ENST00000573827 GRM1Q13255 1194 aa21.89■■□□□ 1.09
SMG6-214ENST00000573827 FBXO33Q7Z6M2 555 aa21.89■■□□□ 1.09
SMG6-214ENST00000573827 ARHGAP45Q92619 1136 aa21.89■■□□□ 1.09
SMG6-214ENST00000573827 JAG2Q9Y219 1238 aa21.89■■□□□ 1.09
SMG6-214ENST00000573827 PCDHAC2Q9Y5I4 1007 aa21.89■■□□□ 1.09
SMG6-214ENST00000573827 PDE8BO95263 885 aa21.88■■□□□ 1.09
SMG6-214ENST00000573827 C2orf69Q8N8R5 385 aa21.88■■□□□ 1.09
SMG6-214ENST00000573827 AIDAQ96BJ3 306 aa21.88■■□□□ 1.09
SMG6-214ENST00000573827 FGFR2P21802 821 aa21.87■■□□□ 1.09
SMG6-214ENST00000573827 HIBADHP31937 336 aaKnown RBP21.87■■□□□ 1.09
SMG6-214ENST00000573827 LBX1P52954 281 aa21.87■■□□□ 1.09
SMG6-214ENST00000573827 PRAMEF18Q5VWM3 479 aa21.87■■□□□ 1.09
SMG6-214ENST00000573827 INTS3Q68E01 1043 aaKnown RBP21.87■■□□□ 1.09
SMG6-214ENST00000573827 RGMBQ6NW40 437 aa21.87■■□□□ 1.09
SMG6-214ENST00000573827 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
SMG6-214ENST00000573827 PAPPA2Q9BXP8 1791 aa21.87■■□□□ 1.09
SMG6-214ENST00000573827 METTL24Q5JXM2 366 aa21.86■■□□□ 1.09
SMG6-214ENST00000573827 TNS4Q8IZW8 715 aa21.86■■□□□ 1.09
SMG6-214ENST00000573827 MEIS3Q99687 375 aa21.86■■□□□ 1.09
SMG6-214ENST00000573827 HDAC9Q9UKV0 1011 aa21.86■■□□□ 1.09
SMG6-214ENST00000573827 TNNQ9UQP3 1299 aa21.86■■□□□ 1.09
SMG6-214ENST00000573827 KIF16BQ96L93 1317 aa21.85■■□□□ 1.09
SMG6-214ENST00000573827 EYA2O00167 538 aa21.85■■□□□ 1.09
SMG6-214ENST00000573827 FKBP1BP68106 108 aa21.85■■□□□ 1.09
SMG6-214ENST00000573827 NOGQ13253 232 aa21.85■■□□□ 1.09
SMG6-214ENST00000573827 MOB2Q70IA6 237 aa21.85■■□□□ 1.09
SMG6-214ENST00000573827 SPDYE2BA6NHP3 402 aa21.84■■□□□ 1.09
SMG6-214ENST00000573827 BCAR3O75815 825 aa21.84■■□□□ 1.09
SMG6-214ENST00000573827 UBTFL1P0CB47 393 aaPredicted RBP21.84■■□□□ 1.09
SMG6-214ENST00000573827 SPDYE6P0CI01 402 aa21.84■■□□□ 1.09
SMG6-214ENST00000573827 LRRFIP2Q9Y608 721 aaKnown RBP21.84■■□□□ 1.09
SMG6-214ENST00000573827 SLC10A3P09131 477 aa21.83■■□□□ 1.09
SMG6-214ENST00000573827 TRIM27P14373 513 aa21.83■■□□□ 1.09
SMG6-214ENST00000573827 GRIK5Q16478 980 aa21.83■■□□□ 1.09
SMG6-214ENST00000573827 PRMT6Q96LA8 375 aaPredicted RBP21.83■■□□□ 1.09
SMG6-214ENST00000573827 ARAP2Q8WZ64 1704 aa21.83■■□□□ 1.08
SMG6-214ENST00000573827 F8W031 263 aaPredicted RBP21.82■■□□□ 1.08
SMG6-214ENST00000573827 DLGAP5Q15398 846 aa21.82■■□□□ 1.08
SMG6-214ENST00000573827 CFAP100Q494V2 611 aa21.82■■□□□ 1.08
SMG6-214ENST00000573827 MFSD14BQ5SR56 506 aa21.82■■□□□ 1.08
SMG6-214ENST00000573827 BCAMP50895 628 aa21.81■■□□□ 1.08
SMG6-214ENST00000573827 ZNF157P51786 506 aaPredicted RBP21.81■■□□□ 1.08
SMG6-214ENST00000573827 HNRNPUQ00839 825 aaKnown RBP eCLIP21.81■■□□□ 1.08
SMG6-214ENST00000573827 PUM3Q15397 648 aaKnown RBP21.81■■□□□ 1.08
SMG6-214ENST00000573827 RASAL3Q86YV0 1011 aa21.81■■□□□ 1.08
SMG6-214ENST00000573827 APOBEC3FQ8IUX4 373 aaKnown RBP21.81■■□□□ 1.08
SMG6-214ENST00000573827 CCDC102AQ96A19 550 aa21.81■■□□□ 1.08
SMG6-214ENST00000573827 SSC5DA1L4H1 1573 aa21.81■■□□□ 1.08
SMG6-214ENST00000573827 ECM29Q5VYK3 1845 aa21.8■■□□□ 1.08
SMG6-214ENST00000573827 COL1A1P02452 1464 aaPredicted RBP21.8■■□□□ 1.08
SMG6-214ENST00000573827 CIAO1O76071 339 aa21.8■■□□□ 1.08
SMG6-214ENST00000573827 FBXO3Q9UK99 471 aa21.8■■□□□ 1.08
SMG6-214ENST00000573827 IQSEC3Q9UPP2 1182 aaPredicted RBP21.8■■□□□ 1.08
SMG6-214ENST00000573827 UBE2Q2LH0YL09 131 aa21.79■■□□□ 1.08
SMG6-214ENST00000573827 KIF23Q02241 960 aaPredicted RBP21.79■■□□□ 1.08
SMG6-214ENST00000573827 MTX1Q13505 466 aa21.79■■□□□ 1.08
SMG6-214ENST00000573827 ATF7IPQ6VMQ6 1270 aa21.79■■□□□ 1.08
SMG6-214ENST00000573827 DEFB129Q9H1M3 183 aa21.79■■□□□ 1.08
SMG6-214ENST00000573827 COPRSQ9NQ92 184 aa21.79■■□□□ 1.08
SMG6-214ENST00000573827 TSKSQ9UJT2 592 aa21.79■■□□□ 1.08
SMG6-214ENST00000573827 SERPINA10Q9UK55 444 aa21.79■■□□□ 1.08
SMG6-214ENST00000573827 CA12O43570 354 aa21.78■■□□□ 1.08
SMG6-214ENST00000573827 TTF2Q9UNY4 1162 aaKnown RBP21.78■■□□□ 1.08
SMG6-214ENST00000573827 PA2G4Q9UQ80 394 aaKnown RBP21.78■■□□□ 1.08
SMG6-214ENST00000573827 CLRN2A0PK11 232 aa21.77■■□□□ 1.08
SMG6-214ENST00000573827 LDLRAD1Q5T700 205 aa21.77■■□□□ 1.08
SMG6-214ENST00000573827 LPIN2Q92539 896 aa21.77■■□□□ 1.08
SMG6-214ENST00000573827 CSRNP1Q96S65 589 aa21.77■■□□□ 1.08
SMG6-214ENST00000573827 SPDYE2Q495Y8 402 aa21.76■■□□□ 1.07
SMG6-214ENST00000573827 CAVIN4Q5BKX8 364 aa21.76■■□□□ 1.07
SMG6-214ENST00000573827 BEGAINQ9BUH8 593 aa21.76■■□□□ 1.07
SMG6-214ENST00000573827 SIL1Q9H173 461 aa21.76■■□□□ 1.07
SMG6-214ENST00000573827 IPO8O15397 1037 aaKnown RBP21.75■■□□□ 1.07
SMG6-214ENST00000573827 IFIT1P09914 478 aaKnown RBP21.75■■□□□ 1.07
SMG6-214ENST00000573827 VPS37DQ86XT2 251 aa21.75■■□□□ 1.07
SMG6-214ENST00000573827 PPP2R3BQ9Y5P8 575 aa21.75■■□□□ 1.07
SMG6-214ENST00000573827 ZBED9Q6R2W3 1325 aa21.75■■□□□ 1.07
SMG6-214ENST00000573827 ZBTB22O15209 634 aa21.74■■□□□ 1.07
SMG6-214ENST00000573827 GNAI3P08754 354 aa21.74■■□□□ 1.07
SMG6-214ENST00000573827 IL15P40933 162 aaPredicted RBP21.74■■□□□ 1.07
SMG6-214ENST00000573827 CRKP46108 304 aa21.74■■□□□ 1.07
SMG6-214ENST00000573827 CHAF1AQ13111 956 aaPredicted RBP21.74■■□□□ 1.07
SMG6-214ENST00000573827 MAP3K11Q16584 847 aa21.74■■□□□ 1.07
SMG6-214ENST00000573827 DZIP1LQ8IYY4 767 aaKnown RBP21.74■■□□□ 1.07
SMG6-214ENST00000573827 TBC1D22AQ8WUA7 517 aa21.74■■□□□ 1.07
SMG6-214ENST00000573827 FZD1Q9UP38 647 aa21.74■■□□□ 1.07
SMG6-214ENST00000573827 HDAC5Q9UQL6 1122 aa21.74■■□□□ 1.07
SMG6-214ENST00000573827 SLC5A1P13866 664 aa21.73■■□□□ 1.07
SMG6-214ENST00000573827 HDLBPQ00341 1268 aaKnown RBP21.73■■□□□ 1.07
SMG6-214ENST00000573827 FRAT1Q92837 279 aaPredicted RBP21.73■■□□□ 1.07
SMG6-214ENST00000573827 ZNF70Q9UC06 446 aaPredicted RBP21.73■■□□□ 1.07
SMG6-214ENST00000573827 CASP8AP2Q9UKL3 1982 aa21.72■■□□□ 1.07
SMG6-214ENST00000573827 NF2P35240 595 aa21.72■■□□□ 1.07
SMG6-214ENST00000573827 RASA3Q14644 834 aa21.72■■□□□ 1.07
SMG6-214ENST00000573827 ATP2B3Q16720 1220 aa21.72■■□□□ 1.07
SMG6-214ENST00000573827 CLUAP1Q96AJ1 413 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms