RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 GALNT12Q8IXK2 581 aa6.49□□□□□ -1.37
CDC27-213ENST00000571643 AGGF1Q8N302 714 aaeCLIP6.49□□□□□ -1.37
CDC27-213ENST00000571643 FAM129BQ96TA1 746 aa6.49□□□□□ -1.37
CDC27-213ENST00000571643 TM4SF5O14894 197 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 WISP1O95388 367 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 HP1BP3Q5SSJ5 553 aaPredicted RBP6.48□□□□□ -1.37
CDC27-213ENST00000571643 ADAMTSL4Q6UY14 1074 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 ASAP3Q8TDY4 903 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 FOXD4L4Q8WXT5 416 aaPredicted RBP6.48□□□□□ -1.37
CDC27-213ENST00000571643 SLC7A3Q8WY07 619 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 KLHDC7BQ96G42 594 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 DMRTB1Q96MA1 342 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 HHIPQ96QV1 700 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 DNAJC25Q9H1X3 360 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
CDC27-213ENST00000571643 SART1O43290 800 aaKnown RBP6.47□□□□□ -1.37
CDC27-213ENST00000571643 CPNE3O75131 537 aaKnown RBP6.47□□□□□ -1.37
CDC27-213ENST00000571643 PEAR1Q5VY43 1037 aaPredicted RBP6.47□□□□□ -1.37
CDC27-213ENST00000571643 FDX2Q6P4F2 183 aa6.47□□□□□ -1.37
CDC27-213ENST00000571643 KIAA1211Q6ZU35 1233 aa6.47□□□□□ -1.37
CDC27-213ENST00000571643 DDX54Q8TDD1 881 aaKnown RBP6.47□□□□□ -1.37
CDC27-213ENST00000571643 UTP4Q969X6 686 aaKnown RBP6.47□□□□□ -1.37
CDC27-213ENST00000571643 RUSC1Q9BVN2 902 aa6.47□□□□□ -1.37
CDC27-213ENST00000571643 KCNK4Q9NYG8 393 aa6.47□□□□□ -1.37
CDC27-213ENST00000571643 GNEQ9Y223 722 aaKnown RBP6.47□□□□□ -1.37
CDC27-213ENST00000571643 RAXQ9Y2V3 346 aa6.47□□□□□ -1.37
CDC27-213ENST00000571643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.47□□□□□ -1.37
CDC27-213ENST00000571643 HYAL3O43820 417 aaPredicted RBP6.46□□□□□ -1.38
CDC27-213ENST00000571643 ADAM11O75078 769 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 TRPA1O75762 1119 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 NLRP12P59046 1061 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 ECM1Q16610 540 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 KIAA0319Q5VV43 1072 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 VN1R5Q7Z5H4 357 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 CCNJLQ8IV13 435 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 TMC1Q8TDI8 760 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 UBASH3BQ8TF42 649 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 ALKBH8Q96BT7 664 aaKnown RBP6.46□□□□□ -1.38
CDC27-213ENST00000571643 RBCK1Q9BYM8 510 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 LIN7BQ9HAP6 207 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 ZFYVE1Q9HBF4 777 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 RNF112Q9ULX5 631 aa6.46□□□□□ -1.38
CDC27-213ENST00000571643 MEGF11A6BM72 1044 aa6.45□□□□□ -1.38
CDC27-213ENST00000571643 FSTP19883 344 aa6.45□□□□□ -1.38
CDC27-213ENST00000571643 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
CDC27-213ENST00000571643 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.45□□□□□ -1.38
CDC27-213ENST00000571643 NBPF11Q86T75 865 aa6.45□□□□□ -1.38
CDC27-213ENST00000571643 FAM46AQ96IP4 442 aaKnown RBP6.45□□□□□ -1.38
CDC27-213ENST00000571643 MYRFLQ96LU7 910 aa6.45□□□□□ -1.38
CDC27-213ENST00000571643 CLEC4MQ9H2X3 399 aaPredicted RBP6.45□□□□□ -1.38
CDC27-213ENST00000571643 CYP4F12Q9HCS2 524 aa6.45□□□□□ -1.38
CDC27-213ENST00000571643 LATS2Q9NRM7 1088 aa6.45□□□□□ -1.38
CDC27-213ENST00000571643 STOML1Q9UBI4 398 aa6.45□□□□□ -1.38
CDC27-213ENST00000571643 A0A1W2PP55 124 aa6.44□□□□□ -1.38
CDC27-213ENST00000571643 SOWAHDA6NJG2 315 aa6.44□□□□□ -1.38
CDC27-213ENST00000571643 DDX3YO15523 660 aaKnown RBP6.44□□□□□ -1.38
CDC27-213ENST00000571643 GAS2O43903 313 aaKnown RBP6.44□□□□□ -1.38
CDC27-213ENST00000571643 ESRRAP11474 423 aaPredicted RBP6.44□□□□□ -1.38
CDC27-213ENST00000571643 HNRNPUQ00839 825 aaKnown RBP eCLIP6.44□□□□□ -1.38
CDC27-213ENST00000571643 UBL7Q96S82 380 aaPredicted RBP6.44□□□□□ -1.38
CDC27-213ENST00000571643 A0A096LPE4 126 aa6.43□□□□□ -1.38
CDC27-213ENST00000571643 A0A1W2PPZ6 126 aa6.43□□□□□ -1.38
CDC27-213ENST00000571643 SOX1O00570 391 aaPredicted RBP6.43□□□□□ -1.38
CDC27-213ENST00000571643 POLR3DP05423 398 aaPredicted RBP6.43□□□□□ -1.38
CDC27-213ENST00000571643 PTPN12Q05209 780 aaKnown RBP6.43□□□□□ -1.38
CDC27-213ENST00000571643 ARMC10Q8N2F6 343 aa6.43□□□□□ -1.38
CDC27-213ENST00000571643 USP26Q9BXU7 913 aa6.43□□□□□ -1.38
CDC27-213ENST00000571643 SUGCTQ9HAC7 445 aa6.43□□□□□ -1.38
CDC27-213ENST00000571643 DCTN4Q9UJW0 460 aa6.43□□□□□ -1.38
CDC27-213ENST00000571643 TRAK1Q9UPV9 953 aa6.43□□□□□ -1.38
CDC27-213ENST00000571643 ABCC9O60706 1549 aa6.42□□□□□ -1.38
CDC27-213ENST00000571643 PATL2C9JE40 543 aaKnown RBP6.42□□□□□ -1.38
CDC27-213ENST00000571643 IGLV1-40P01703 118 aa6.42□□□□□ -1.38
CDC27-213ENST00000571643 PCDH1Q08174 1060 aa6.42□□□□□ -1.38
CDC27-213ENST00000571643 NUTM2GQ5VZR2 741 aa6.42□□□□□ -1.38
CDC27-213ENST00000571643 TCF12Q99081 682 aa6.42□□□□□ -1.38
CDC27-213ENST00000571643 EHD4Q9H223 541 aa6.42□□□□□ -1.38
CDC27-213ENST00000571643 NPHS2Q9NP85 383 aa6.42□□□□□ -1.38
CDC27-213ENST00000571643 BIN2Q9UBW5 565 aaPredicted RBP6.42□□□□□ -1.38
CDC27-213ENST00000571643 LOC100289279A0A1B0GTE1 492 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 EIF1AYO14602 144 aaKnown RBP6.41□□□□□ -1.38
CDC27-213ENST00000571643 GPR182O15218 404 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 CYP11A1P05108 521 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 ITPKAP23677 461 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 GSTM4Q03013 218 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 ORC1Q13415 861 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 PRPF40BQ6NWY9 871 aaKnown RBP6.41□□□□□ -1.38
CDC27-213ENST00000571643 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 CLEC10AQ8IUN9 316 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 FAM20CQ8IXL6 584 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 SMG8Q8ND04 991 aaKnown RBP6.41□□□□□ -1.38
CDC27-213ENST00000571643 CSRNP1Q96S65 589 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 YIPF2Q9BWQ6 316 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 TMPRSS13Q9BYE2 586 aa6.41□□□□□ -1.38
CDC27-213ENST00000571643 METTL12A8MUP2 240 aa6.4□□□□□ -1.38
CDC27-213ENST00000571643 PREPP48147 710 aa6.4□□□□□ -1.38
CDC27-213ENST00000571643 KCNA1Q09470 495 aa6.4□□□□□ -1.38
CDC27-213ENST00000571643 NFIAQ12857 509 aa6.4□□□□□ -1.38
CDC27-213ENST00000571643 RPS26P11Q5JNZ5 115 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms