RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 SLC10A3P09131 477 aa23.39■■□□□ 1.33
CPNE7-209ENST00000568977 CT47B1P0C2W7 299 aaPredicted RBP23.39■■□□□ 1.33
CPNE7-209ENST00000568977 UBE4AQ14139 1066 aa23.39■■□□□ 1.33
CPNE7-209ENST00000568977 USP44Q9H0E7 712 aa23.39■■□□□ 1.33
CPNE7-209ENST00000568977 JAG2Q9Y219 1238 aa23.39■■□□□ 1.33
CPNE7-209ENST00000568977 MROH5Q6ZUA9 1318 aa23.38■■□□□ 1.33
CPNE7-209ENST00000568977 FKBP1AP62942 108 aaKnown RBP23.38■■□□□ 1.33
CPNE7-209ENST00000568977 PRAMEF18Q5VWM3 479 aa23.38■■□□□ 1.33
CPNE7-209ENST00000568977 APOBEC3FQ8IUX4 373 aaKnown RBP23.38■■□□□ 1.33
CPNE7-209ENST00000568977 RIPOR2Q9Y4F9 1068 aa23.38■■□□□ 1.33
CPNE7-209ENST00000568977 COL1A1P02452 1464 aaPredicted RBP23.36■■□□□ 1.33
CPNE7-209ENST00000568977 AKAP11Q9UKA4 1901 aa23.36■■□□□ 1.33
CPNE7-209ENST00000568977 F8W031 263 aaPredicted RBP23.36■■□□□ 1.33
CPNE7-209ENST00000568977 GYG1P46976 350 aa23.36■■□□□ 1.33
CPNE7-209ENST00000568977 DLGAP5Q15398 846 aa23.36■■□□□ 1.33
CPNE7-209ENST00000568977 LRRC24Q50LG9 513 aa23.36■■□□□ 1.33
CPNE7-209ENST00000568977 MOB2Q70IA6 237 aa23.36■■□□□ 1.33
CPNE7-209ENST00000568977 RASAL3Q86YV0 1011 aa23.36■■□□□ 1.33
CPNE7-209ENST00000568977 FAM205AQ6ZU69 1335 aa23.35■■□□□ 1.33
CPNE7-209ENST00000568977 CASP8AP2Q9UKL3 1982 aa23.35■■□□□ 1.33
CPNE7-209ENST00000568977 NF2P35240 595 aa23.35■■□□□ 1.33
CPNE7-209ENST00000568977 KIF23Q02241 960 aaPredicted RBP23.35■■□□□ 1.33
CPNE7-209ENST00000568977 METTL24Q5JXM2 366 aa23.35■■□□□ 1.33
CPNE7-209ENST00000568977 MTMR14Q8NCE2 650 aa23.35■■□□□ 1.33
CPNE7-209ENST00000568977 TDRD7Q8NHU6 1098 aaKnown RBP23.35■■□□□ 1.33
CPNE7-209ENST00000568977 HIBADHP31937 336 aaKnown RBP23.34■■□□□ 1.33
CPNE7-209ENST00000568977 KLHDC4Q8TBB5 520 aa23.34■■□□□ 1.33
CPNE7-209ENST00000568977 FAM84BQ96KN1 310 aaPredicted RBP23.34■■□□□ 1.33
CPNE7-209ENST00000568977 PCDHAC2Q9Y5I4 1007 aa23.34■■□□□ 1.33
CPNE7-209ENST00000568977 TTLL12Q14166 644 aaPredicted RBP23.33■■□□□ 1.33
CPNE7-209ENST00000568977 CFAP100Q494V2 611 aa23.33■■□□□ 1.33
CPNE7-209ENST00000568977 VGLL2Q8N8G2 317 aa23.33■■□□□ 1.33
CPNE7-209ENST00000568977 NOB1Q9ULX3 412 aaKnown RBP23.33■■□□□ 1.33
CPNE7-209ENST00000568977 SPDYE2BA6NHP3 402 aa23.32■■□□□ 1.32
CPNE7-209ENST00000568977 UBE2Q2LH0YL09 131 aa23.32■■□□□ 1.32
CPNE7-209ENST00000568977 SPDYE6P0CI01 402 aa23.32■■□□□ 1.32
CPNE7-209ENST00000568977 MFSD14BQ5SR56 506 aa23.32■■□□□ 1.32
CPNE7-209ENST00000568977 PDE8BO95263 885 aa23.31■■□□□ 1.32
CPNE7-209ENST00000568977 API5Q9BZZ5 524 aaKnown RBP23.31■■□□□ 1.32
CPNE7-209ENST00000568977 CLRN2A0PK11 232 aa23.3■■□□□ 1.32
CPNE7-209ENST00000568977 MYO1BO43795 1136 aa23.3■■□□□ 1.32
CPNE7-209ENST00000568977 UBTFL1P0CB47 393 aaPredicted RBP23.3■■□□□ 1.32
CPNE7-209ENST00000568977 SAGE1Q9NXZ1 904 aa23.3■■□□□ 1.32
CPNE7-209ENST00000568977 MYH13Q9UKX3 1938 aa23.29■■□□□ 1.32
CPNE7-209ENST00000568977 SSC5DA1L4H1 1573 aa23.29■■□□□ 1.32
CPNE7-209ENST00000568977 RFX5P48382 616 aaPredicted RBP23.29■■□□□ 1.32
CPNE7-209ENST00000568977 RARSP54136 660 aaKnown RBP23.29■■□□□ 1.32
CPNE7-209ENST00000568977 FBXO33Q7Z6M2 555 aa23.29■■□□□ 1.32
CPNE7-209ENST00000568977 VPS37DQ86XT2 251 aa23.29■■□□□ 1.32
CPNE7-209ENST00000568977 PRMT6Q96LA8 375 aaPredicted RBP23.29■■□□□ 1.32
CPNE7-209ENST00000568977 CSRNP1Q96S65 589 aa23.29■■□□□ 1.32
CPNE7-209ENST00000568977 DEFB129Q9H1M3 183 aa23.29■■□□□ 1.32
CPNE7-209ENST00000568977 IQSEC3Q9UPP2 1182 aaPredicted RBP23.29■■□□□ 1.32
CPNE7-209ENST00000568977 AOX1Q06278 1338 aa23.29■■□□□ 1.32
CPNE7-209ENST00000568977 KIF16BQ96L93 1317 aa23.29■■□□□ 1.32
CPNE7-209ENST00000568977 RBM5P52756 815 aaKnown RBP eCLIP23.28■■□□□ 1.32
CPNE7-209ENST00000568977 ABHD8Q96I13 439 aa23.28■■□□□ 1.32
CPNE7-209ENST00000568977 TTF2Q9UNY4 1162 aaKnown RBP23.28■■□□□ 1.32
CPNE7-209ENST00000568977 PPP2R3BQ9Y5P8 575 aa23.28■■□□□ 1.32
CPNE7-209ENST00000568977 EYA2O00167 538 aa23.27■■□□□ 1.32
CPNE7-209ENST00000568977 PRKG1Q13976 671 aa23.27■■□□□ 1.32
CPNE7-209ENST00000568977 PUM3Q15397 648 aaKnown RBP23.27■■□□□ 1.32
CPNE7-209ENST00000568977 CAVIN4Q5BKX8 364 aa23.27■■□□□ 1.32
CPNE7-209ENST00000568977 ARMC9Q7Z3E5 817 aa23.27■■□□□ 1.32
CPNE7-209ENST00000568977 VEZTQ9HBM0 779 aa23.27■■□□□ 1.32
CPNE7-209ENST00000568977 RNF186Q9NXI6 227 aa23.27■■□□□ 1.32
CPNE7-209ENST00000568977 PTPN12Q05209 780 aaKnown RBP23.26■■□□□ 1.31
CPNE7-209ENST00000568977 CHAF1AQ13111 956 aaPredicted RBP23.26■■□□□ 1.31
CPNE7-209ENST00000568977 REM2Q8IYK8 340 aaPredicted RBP23.26■■□□□ 1.31
CPNE7-209ENST00000568977 SERPINA10Q9UK55 444 aa23.26■■□□□ 1.31
CPNE7-209ENST00000568977 TRPA1O75762 1119 aa23.25■■□□□ 1.31
CPNE7-209ENST00000568977 FGFR2P21802 821 aa23.25■■□□□ 1.31
CPNE7-209ENST00000568977 ANGEL1Q9UNK9 670 aaKnown RBP23.25■■□□□ 1.31
CPNE7-209ENST00000568977 FRAT2O75474 233 aaPredicted RBP23.24■■□□□ 1.31
CPNE7-209ENST00000568977 IFIT1P09914 478 aaKnown RBP23.24■■□□□ 1.31
CPNE7-209ENST00000568977 FZD1Q9UP38 647 aa23.24■■□□□ 1.31
CPNE7-209ENST00000568977 LRRFIP2Q9Y608 721 aaKnown RBP23.24■■□□□ 1.31
CPNE7-209ENST00000568977 BCAMP50895 628 aa23.23■■□□□ 1.31
CPNE7-209ENST00000568977 GRIK5Q16478 980 aa23.23■■□□□ 1.31
CPNE7-209ENST00000568977 SPDYE2Q495Y8 402 aa23.23■■□□□ 1.31
CPNE7-209ENST00000568977 ATG9AQ7Z3C6 839 aa23.23■■□□□ 1.31
CPNE7-209ENST00000568977 TBC1D22AQ8WUA7 517 aa23.23■■□□□ 1.31
CPNE7-209ENST00000568977 MEIS3Q99687 375 aa23.23■■□□□ 1.31
CPNE7-209ENST00000568977 SLC5A1P13866 664 aa23.22■■□□□ 1.31
CPNE7-209ENST00000568977 CRKP46108 304 aa23.22■■□□□ 1.31
CPNE7-209ENST00000568977 LDLRAD1Q5T700 205 aa23.22■■□□□ 1.31
CPNE7-209ENST00000568977 SIL1Q9H173 461 aa23.22■■□□□ 1.31
CPNE7-209ENST00000568977 HDAC5Q9UQL6 1122 aa23.22■■□□□ 1.31
CPNE7-209ENST00000568977 OTOFQ9HC10 1997 aa23.21■■□□□ 1.31
CPNE7-209ENST00000568977 MKRN3Q13064 507 aaKnown RBP23.21■■□□□ 1.31
CPNE7-209ENST00000568977 TNFAIP1Q13829 316 aa23.21■■□□□ 1.31
CPNE7-209ENST00000568977 RASA3Q14644 834 aa23.21■■□□□ 1.31
CPNE7-209ENST00000568977 MAP3K11Q16584 847 aa23.21■■□□□ 1.31
CPNE7-209ENST00000568977 DZIP1LQ8IYY4 767 aaKnown RBP23.21■■□□□ 1.31
CPNE7-209ENST00000568977 ARHGAP45Q92619 1136 aa23.21■■□□□ 1.31
CPNE7-209ENST00000568977 MCOLN1Q9GZU1 580 aa23.21■■□□□ 1.31
CPNE7-209ENST00000568977 TDRD3Q9H7E2 651 aaKnown RBP23.21■■□□□ 1.31
CPNE7-209ENST00000568977 ZNF70Q9UC06 446 aaPredicted RBP23.21■■□□□ 1.31
CPNE7-209ENST00000568977 FBXO3Q9UK99 471 aa23.21■■□□□ 1.31
CPNE7-209ENST00000568977 LAMB1P07942 1786 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms