RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 AOX1Q06278 1338 aa19.74■□□□□ 0.75
NME3-211ENST00000568561 PLIN1O60240 522 aa19.73■□□□□ 0.75
NME3-211ENST00000568561 DLGAP5Q15398 846 aa19.73■□□□□ 0.75
NME3-211ENST00000568561 CLRN2A0PK11 232 aa19.72■□□□□ 0.75
NME3-211ENST00000568561 ARMC9Q7Z3E5 817 aa19.72■□□□□ 0.75
NME3-211ENST00000568561 ZNF804AQ7Z570 1209 aa19.72■□□□□ 0.75
NME3-211ENST00000568561 ARAP2Q8WZ64 1704 aa19.72■□□□□ 0.75
NME3-211ENST00000568561 DEFB129Q9H1M3 183 aa19.72■□□□□ 0.75
NME3-211ENST00000568561 COL1A1P02452 1464 aaPredicted RBP19.72■□□□□ 0.75
NME3-211ENST00000568561 TM4SF4P48230 202 aa19.71■□□□□ 0.75
NME3-211ENST00000568561 MMP14P50281 582 aa19.71■□□□□ 0.75
NME3-211ENST00000568561 CFAP100Q494V2 611 aa19.71■□□□□ 0.75
NME3-211ENST00000568561 TAF7LQ5H9L4 462 aa19.71■□□□□ 0.75
NME3-211ENST00000568561 C15orf52Q6ZUT6 534 aaKnown RBP19.71■□□□□ 0.75
NME3-211ENST00000568561 R3HDMLQ9H3Y0 253 aa19.71■□□□□ 0.75
NME3-211ENST00000568561 HPS5Q9UPZ3 1129 aa19.71■□□□□ 0.75
NME3-211ENST00000568561 OTOFQ9HC10 1997 aa19.71■□□□□ 0.75
NME3-211ENST00000568561 GRM8O00222 908 aa19.7■□□□□ 0.74
NME3-211ENST00000568561 ANP32CO43423 234 aa19.7■□□□□ 0.74
NME3-211ENST00000568561 IL1R1P14778 569 aa19.7■□□□□ 0.74
NME3-211ENST00000568561 LDLRAD1Q5T700 205 aa19.7■□□□□ 0.74
NME3-211ENST00000568561 SLC4A10Q6U841 1118 aa19.7■□□□□ 0.74
NME3-211ENST00000568561 CLMNQ96JQ2 1002 aa19.7■□□□□ 0.74
NME3-211ENST00000568561 CNNM1Q9NRU3 951 aa19.7■□□□□ 0.74
NME3-211ENST00000568561 LAMB1P07942 1786 aa19.7■□□□□ 0.74
NME3-211ENST00000568561 GPR25O00155 361 aa19.69■□□□□ 0.74
NME3-211ENST00000568561 SLC34A2O95436 690 aa19.69■□□□□ 0.74
NME3-211ENST00000568561 SREBF2Q12772 1141 aa19.69■□□□□ 0.74
NME3-211ENST00000568561 CCDC57Q2TAC2 916 aa19.69■□□□□ 0.74
NME3-211ENST00000568561 SPRYD7Q5W111 196 aa19.69■□□□□ 0.74
NME3-211ENST00000568561 LDHAL6AQ6ZMR3 332 aa19.69■□□□□ 0.74
NME3-211ENST00000568561 VEZTQ9HBM0 779 aa19.69■□□□□ 0.74
NME3-211ENST00000568561 SPDYE2BA6NHP3 402 aa19.68■□□□□ 0.74
NME3-211ENST00000568561 SPDYE6P0CI01 402 aa19.68■□□□□ 0.74
NME3-211ENST00000568561 MTMR14Q8NCE2 650 aa19.68■□□□□ 0.74
NME3-211ENST00000568561 PRMT6Q96LA8 375 aaPredicted RBP19.68■□□□□ 0.74
NME3-211ENST00000568561 C9orf78Q9NZ63 289 aaPredicted RBP19.68■□□□□ 0.74
NME3-211ENST00000568561 RBM5P52756 815 aaKnown RBP eCLIP19.67■□□□□ 0.74
NME3-211ENST00000568561 FAM9BQ8IZU0 186 aa19.67■□□□□ 0.74
NME3-211ENST00000568561 PUS3Q9BZE2 481 aaKnown RBP19.67■□□□□ 0.74
NME3-211ENST00000568561 GYG1P46976 350 aa19.66■□□□□ 0.74
NME3-211ENST00000568561 NBPF12Q5TAG4 269 aaPredicted RBP19.66■□□□□ 0.74
NME3-211ENST00000568561 SUCLG2Q96I99 432 aa19.66■□□□□ 0.74
NME3-211ENST00000568561 SRCIN1Q9C0H9 1055 aa19.66■□□□□ 0.74
NME3-211ENST00000568561 MYO1BO43795 1136 aa19.65■□□□□ 0.74
NME3-211ENST00000568561 SLC10A4Q96EP9 437 aa19.65■□□□□ 0.74
NME3-211ENST00000568561 KAZALD1Q96I82 304 aa19.65■□□□□ 0.74
NME3-211ENST00000568561 WNK4Q96J92 1243 aa19.65■□□□□ 0.74
NME3-211ENST00000568561 FKTNO75072 461 aa19.64■□□□□ 0.73
NME3-211ENST00000568561 ALDH1L1O75891 902 aa19.64■□□□□ 0.73
NME3-211ENST00000568561 FKBP1AP62942 108 aaKnown RBP19.64■□□□□ 0.73
NME3-211ENST00000568561 PPP2R3BQ9Y5P8 575 aa19.64■□□□□ 0.73
NME3-211ENST00000568561 FAM205AQ6ZU69 1335 aa19.63■□□□□ 0.73
NME3-211ENST00000568561 IGF2BP3O00425 579 aaKnown RBP eCLIP19.63■□□□□ 0.73
NME3-211ENST00000568561 PPP1R12BO60237 982 aaPredicted RBP19.63■□□□□ 0.73
NME3-211ENST00000568561 NBPF7P0C2Y1 421 aaPredicted RBP19.63■□□□□ 0.73
NME3-211ENST00000568561 RASA3Q14644 834 aa19.63■□□□□ 0.73
NME3-211ENST00000568561 PKN2Q16513 984 aaKnown RBP19.63■□□□□ 0.73
NME3-211ENST00000568561 MAP3K11Q16584 847 aa19.63■□□□□ 0.73
NME3-211ENST00000568561 MFSD14BQ5SR56 506 aa19.63■□□□□ 0.73
NME3-211ENST00000568561 CDAN1Q8IWY9 1227 aa19.63■□□□□ 0.73
NME3-211ENST00000568561 MANSC4A6NHS7 340 aaPredicted RBP19.62■□□□□ 0.73
NME3-211ENST00000568561 NOM1Q5C9Z4 860 aaKnown RBP19.62■□□□□ 0.73
NME3-211ENST00000568561 IFNL1Q8IU54 200 aa19.62■□□□□ 0.73
NME3-211ENST00000568561 TDRD7Q8NHU6 1098 aaKnown RBP19.62■□□□□ 0.73
NME3-211ENST00000568561 CFHR5Q9BXR6 569 aa19.62■□□□□ 0.73
NME3-211ENST00000568561 TTF2Q9UNY4 1162 aaKnown RBP19.62■□□□□ 0.73
NME3-211ENST00000568561 IQSEC3Q9UPP2 1182 aaPredicted RBP19.62■□□□□ 0.73
NME3-211ENST00000568561 ZBTB48P10074 688 aaPredicted RBP19.61■□□□□ 0.73
NME3-211ENST00000568561 GJA5P36382 358 aa19.61■□□□□ 0.73
NME3-211ENST00000568561 SUPT20HL1Q3ZLR7 823 aa19.61■□□□□ 0.73
NME3-211ENST00000568561 FBXO46Q6PJ61 603 aaPredicted RBP19.61■□□□□ 0.73
NME3-211ENST00000568561 FAM84BQ96KN1 310 aaPredicted RBP19.61■□□□□ 0.73
NME3-211ENST00000568561 TDRD3Q9H7E2 651 aaKnown RBP19.61■□□□□ 0.73
NME3-211ENST00000568561 HTTP42858 3142 aa19.61■□□□□ 0.73
NME3-211ENST00000568561 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
NME3-211ENST00000568561 USP2O75604 605 aaPredicted RBP19.6■□□□□ 0.73
NME3-211ENST00000568561 HIBADHP31937 336 aaKnown RBP19.6■□□□□ 0.73
NME3-211ENST00000568561 UBE4AQ14139 1066 aa19.6■□□□□ 0.73
NME3-211ENST00000568561 GRIK5Q16478 980 aa19.6■□□□□ 0.73
NME3-211ENST00000568561 SPDYE2Q495Y8 402 aa19.6■□□□□ 0.73
NME3-211ENST00000568561 BICC1Q9H694 974 aaKnown RBP19.6■□□□□ 0.73
NME3-211ENST00000568561 ZNF70Q9UC06 446 aaPredicted RBP19.6■□□□□ 0.73
NME3-211ENST00000568561 ALDH1A1P00352 501 aa19.59■□□□□ 0.73
NME3-211ENST00000568561 IREB2P48200 963 aaKnown RBP19.59■□□□□ 0.73
NME3-211ENST00000568561 CHAF1AQ13111 956 aaPredicted RBP19.59■□□□□ 0.73
NME3-211ENST00000568561 ELP3Q9H9T3 547 aa19.59■□□□□ 0.73
NME3-211ENST00000568561 MYH13Q9UKX3 1938 aa19.59■□□□□ 0.73
NME3-211ENST00000568561 LRRC24Q50LG9 513 aa19.58■□□□□ 0.72
NME3-211ENST00000568561 ANKRD44Q8N8A2 993 aa19.58■□□□□ 0.72
NME3-211ENST00000568561 SERPINA10Q9UK55 444 aa19.58■□□□□ 0.72
NME3-211ENST00000568561 RIPOR2Q9Y4F9 1068 aa19.58■□□□□ 0.72
NME3-211ENST00000568561 TRIM17Q9Y577 477 aa19.58■□□□□ 0.72
NME3-211ENST00000568561 TCP10L2B9ZVM9 353 aa19.57■□□□□ 0.72
NME3-211ENST00000568561 CRKP46108 304 aa19.57■□□□□ 0.72
NME3-211ENST00000568561 DZIP1LQ8IYY4 767 aaKnown RBP19.57■□□□□ 0.72
NME3-211ENST00000568561 ANKRD13AQ8IZ07 590 aa19.57■□□□□ 0.72
NME3-211ENST00000568561 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
NME3-211ENST00000568561 TEPSINQ96N21 525 aa19.57■□□□□ 0.72
NME3-211ENST00000568561 TMEM39BQ9GZU3 492 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms