RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 OSBPL3Q9H4L5 887 aa18.07■□□□□ 0.48
SPG7-213ENST00000566221 CD209Q9NNX6 404 aa18.07■□□□□ 0.48
SPG7-213ENST00000566221 COL1A1P02452 1464 aaPredicted RBP18.07■□□□□ 0.48
SPG7-213ENST00000566221 PDS5AQ29RF7 1337 aaKnown RBP18.06■□□□□ 0.48
SPG7-213ENST00000566221 ECE2O60344 883 aa18.06■□□□□ 0.48
SPG7-213ENST00000566221 ATP5JP18859 108 aa18.06■□□□□ 0.48
SPG7-213ENST00000566221 NIM1KQ8IY84 436 aa18.06■□□□□ 0.48
SPG7-213ENST00000566221 DBNDD1Q9H9R9 158 aa18.06■□□□□ 0.48
SPG7-213ENST00000566221 FRAT2O75474 233 aaPredicted RBP18.05■□□□□ 0.48
SPG7-213ENST00000566221 GLRX3O76003 335 aaKnown RBP18.05■□□□□ 0.48
SPG7-213ENST00000566221 RASGRF1Q13972 1273 aa18.05■□□□□ 0.48
SPG7-213ENST00000566221 DOK7Q18PE1 504 aa18.05■□□□□ 0.48
SPG7-213ENST00000566221 TSHZ3Q63HK5 1081 aa18.05■□□□□ 0.48
SPG7-213ENST00000566221 PODNQ7Z5L7 613 aa18.05■□□□□ 0.48
SPG7-213ENST00000566221 TDRD7Q8NHU6 1098 aaKnown RBP18.05■□□□□ 0.48
SPG7-213ENST00000566221 PI4K2BQ8TCG2 481 aa18.05■□□□□ 0.48
SPG7-213ENST00000566221 JDP2Q8WYK2 163 aa18.05■□□□□ 0.48
SPG7-213ENST00000566221 DENND2AQ9ULE3 1009 aa18.05■□□□□ 0.48
SPG7-213ENST00000566221 MCAMP43121 646 aa18.04■□□□□ 0.48
SPG7-213ENST00000566221 RGS3P49796 1198 aa18.04■□□□□ 0.48
SPG7-213ENST00000566221 PRELPP51888 382 aa18.04■□□□□ 0.48
SPG7-213ENST00000566221 IQSEC3Q9UPP2 1182 aaPredicted RBP18.04■□□□□ 0.48
SPG7-213ENST00000566221 APLP1P51693 650 aa18.03■□□□□ 0.48
SPG7-213ENST00000566221 SKAP1Q86WV1 359 aa18.03■□□□□ 0.48
SPG7-213ENST00000566221 SPATA5Q8NB90 893 aa18.03■□□□□ 0.48
SPG7-213ENST00000566221 ZNRF3Q9ULT6 936 aa18.03■□□□□ 0.48
SPG7-213ENST00000566221 SCARF1Q14162 830 aa18.02■□□□□ 0.48
SPG7-213ENST00000566221 HAUS7Q99871 368 aa18.02■□□□□ 0.48
SPG7-213ENST00000566221 BOLA2Q9H3K6 86 aa18.02■□□□□ 0.48
SPG7-213ENST00000566221 RNF181Q9P0P0 153 aa18.02■□□□□ 0.48
SPG7-213ENST00000566221 HMG20BQ9P0W2 317 aa18.02■□□□□ 0.48
SPG7-213ENST00000566221 FAM205AQ6ZU69 1335 aa18.01■□□□□ 0.47
SPG7-213ENST00000566221 TTC22Q5TAA0 569 aa18.01■□□□□ 0.47
SPG7-213ENST00000566221 PI16Q6UXB8 463 aa18.01■□□□□ 0.47
SPG7-213ENST00000566221 DNAJC2Q99543 621 aaKnown RBP18.01■□□□□ 0.47
SPG7-213ENST00000566221 MYH2Q9UKX2 1941 aa18.01■□□□□ 0.47
SPG7-213ENST00000566221 YDJCA8MPS7 323 aa18■□□□□ 0.47
SPG7-213ENST00000566221 ZAP70P43403 619 aa18■□□□□ 0.47
SPG7-213ENST00000566221 CHAF1AQ13111 956 aaPredicted RBP18■□□□□ 0.47
SPG7-213ENST00000566221 WDR66Q8TBY9 1149 aa18■□□□□ 0.47
SPG7-213ENST00000566221 TBC1D22AQ8WUA7 517 aa18■□□□□ 0.47
SPG7-213ENST00000566221 SNRKQ9NRH2 765 aa18■□□□□ 0.47
SPG7-213ENST00000566221 SALL1Q9NSC2 1324 aa17.99■□□□□ 0.47
SPG7-213ENST00000566221 ZC3H4Q9UPT8 1303 aaKnown RBP17.99■□□□□ 0.47
SPG7-213ENST00000566221 USP17L3A6NCW0 530 aa17.99■□□□□ 0.47
SPG7-213ENST00000566221 USP17L4A6NCW7 530 aa17.99■□□□□ 0.47
SPG7-213ENST00000566221 FZD9O00144 591 aa17.99■□□□□ 0.47
SPG7-213ENST00000566221 GTF2IP78347 998 aa17.99■□□□□ 0.47
SPG7-213ENST00000566221 TTF1Q15361 905 aaPredicted RBP17.99■□□□□ 0.47
SPG7-213ENST00000566221 STRIP1Q5VSL9 837 aa17.99■□□□□ 0.47
SPG7-213ENST00000566221 C9orf131Q5VYM1 1079 aa17.99■□□□□ 0.47
SPG7-213ENST00000566221 USP17L1Q7RTZ2 530 aa17.99■□□□□ 0.47
SPG7-213ENST00000566221 ZGPATQ8N5A5 531 aaKnown RBP17.99■□□□□ 0.47
SPG7-213ENST00000566221 FBXW7Q969H0 707 aa17.99■□□□□ 0.47
SPG7-213ENST00000566221 PAG1Q9NWQ8 432 aa17.99■□□□□ 0.47
SPG7-213ENST00000566221 EIF6P56537 245 aaKnown RBP17.98■□□□□ 0.47
SPG7-213ENST00000566221 TTLL5Q6EMB2 1281 aa17.98■□□□□ 0.47
SPG7-213ENST00000566221 GOLIM4O00461 696 aa17.97■□□□□ 0.47
SPG7-213ENST00000566221 KIF3CO14782 793 aa17.97■□□□□ 0.47
SPG7-213ENST00000566221 CYP2E1P05181 493 aaPredicted RBP17.97■□□□□ 0.47
SPG7-213ENST00000566221 FKBP1AP62942 108 aaKnown RBP17.97■□□□□ 0.47
SPG7-213ENST00000566221 TNIP1Q15025 636 aa17.97■□□□□ 0.47
SPG7-213ENST00000566221 COL13A1Q5TAT6 717 aaPredicted RBP17.97■□□□□ 0.47
SPG7-213ENST00000566221 CIAPIN1Q6FI81 312 aa17.97■□□□□ 0.47
SPG7-213ENST00000566221 JAG2Q9Y219 1238 aa17.97■□□□□ 0.47
SPG7-213ENST00000566221 NDUFB9Q9Y6M9 179 aa17.97■□□□□ 0.47
SPG7-213ENST00000566221 MYO3BQ8WXR4 1341 aa17.97■□□□□ 0.47
SPG7-213ENST00000566221 ECM29Q5VYK3 1845 aa17.96■□□□□ 0.47
SPG7-213ENST00000566221 RAD17O75943 681 aa17.96■□□□□ 0.47
SPG7-213ENST00000566221 GSPT1P15170 499 aaKnown RBP17.96■□□□□ 0.47
SPG7-213ENST00000566221 BMP2KLQ5H9B9 411 aa17.96■□□□□ 0.47
SPG7-213ENST00000566221 MFSD14BQ5SR56 506 aa17.96■□□□□ 0.47
SPG7-213ENST00000566221 DACT2Q5SW24 774 aa17.96■□□□□ 0.47
SPG7-213ENST00000566221 CNTROBQ8N137 903 aa17.96■□□□□ 0.47
SPG7-213ENST00000566221 DNAJC5GQ8N7S2 189 aa17.96■□□□□ 0.47
SPG7-213ENST00000566221 KCNQ5Q9NR82 932 aa17.96■□□□□ 0.47
SPG7-213ENST00000566221 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.47
SPG7-213ENST00000566221 RFX7Q2KHR2 1363 aa17.95■□□□□ 0.46
SPG7-213ENST00000566221 TRIM6-TRIM34B2RNG4 842 aa17.95■□□□□ 0.46
SPG7-213ENST00000566221 PSMD14O00487 310 aa17.95■□□□□ 0.46
SPG7-213ENST00000566221 MAP4K4O95819 1239 aaPredicted RBP17.95■□□□□ 0.46
SPG7-213ENST00000566221 VIL1P09327 827 aaKnown RBP17.95■□□□□ 0.46
SPG7-213ENST00000566221 CXCL9Q07325 125 aa17.95■□□□□ 0.46
SPG7-213ENST00000566221 SPTY2D1Q68D10 685 aaPredicted RBP17.95■□□□□ 0.46
SPG7-213ENST00000566221 EVI5LQ96CN4 794 aa17.95■□□□□ 0.46
SPG7-213ENST00000566221 EDC3Q96F86 508 aaKnown RBP17.95■□□□□ 0.46
SPG7-213ENST00000566221 SUGT1Q9Y2Z0 365 aa17.95■□□□□ 0.46
SPG7-213ENST00000566221 ZNF541Q9H0D2 1346 aa17.95■□□□□ 0.46
SPG7-213ENST00000566221 IGSF3O75054 1194 aa17.94■□□□□ 0.46
SPG7-213ENST00000566221 RSBN1LQ6PCB5 846 aaPredicted RBP17.94■□□□□ 0.46
SPG7-213ENST00000566221 TNS4Q8IZW8 715 aa17.94■□□□□ 0.46
SPG7-213ENST00000566221 KBTBD3Q8NAB2 608 aa17.94■□□□□ 0.46
SPG7-213ENST00000566221 ANTXR1Q9H6X2 564 aa17.94■□□□□ 0.46
SPG7-213ENST00000566221 PIH1D3Q9NQM4 214 aaKnown RBP17.94■□□□□ 0.46
SPG7-213ENST00000566221 ABCF2Q9UG63 623 aa17.94■□□□□ 0.46
SPG7-213ENST00000566221 LDHBP07195 334 aaKnown RBP17.93■□□□□ 0.46
SPG7-213ENST00000566221 SDSP20132 328 aa17.93■□□□□ 0.46
SPG7-213ENST00000566221 TBC1D9Q6ZT07 1266 aa17.93■□□□□ 0.46
SPG7-213ENST00000566221 ERICH6Q7L0X2 663 aa17.93■□□□□ 0.46
SPG7-213ENST00000566221 CERS5Q8N5B7 392 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms