RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 RBM6P78332 1123 aaKnown RBP7.54□□□□□ -1.2
CHD9-217ENST00000565832 METTL24Q5JXM2 366 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 TRAPPC3LQ5T215 181 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 RC3H1Q5TC82 1133 aaKnown RBP7.54□□□□□ -1.2
CHD9-217ENST00000565832 CLEC4GQ6UXB4 293 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 SLC51AQ86UW1 340 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 XAGE2Q96GT9 111 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 SEC62Q99442 399 aaKnown RBP7.54□□□□□ -1.2
CHD9-217ENST00000565832 ZSWIM6Q9HCJ5 1215 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 ADGRG1Q9Y653 693 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 COL4A1P02462 1669 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 MYH3P11055 1940 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.53□□□□□ -1.2
CHD9-217ENST00000565832 A0A0D9SFI3 127 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 GOLIM4O00461 696 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 GTF2E1P29083 439 aaPredicted RBP7.53□□□□□ -1.2
CHD9-217ENST00000565832 RFC4P35249 363 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 FKBP4Q02790 459 aaKnown RBP eCLIP7.53□□□□□ -1.21e-6■■■■■ 33.9
CHD9-217ENST00000565832 NMIQ13287 307 aaPredicted RBP7.53□□□□□ -1.2
CHD9-217ENST00000565832 COL9A3Q14050 684 aaPredicted RBP7.53□□□□□ -1.2
CHD9-217ENST00000565832 SETDB2Q96T68 719 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 FSD1Q9BTV5 496 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 ZNF652Q9Y2D9 606 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 NHSQ6T4R5 1651 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 RREB1Q92766 1687 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 OATP04181 439 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
CHD9-217ENST00000565832 BECN1Q14457 450 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 PARP10Q53GL7 1025 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 POTEAQ6S8J7 498 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 CCDC129Q6ZRS4 1044 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 ZNF589Q86UQ0 364 aaPredicted RBP7.53□□□□□ -1.2
CHD9-217ENST00000565832 ZNF710Q8N1W2 664 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 VGLL2Q8N8G2 317 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 PXYLP1Q8TE99 480 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 HAUS7Q99871 368 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 LSG1Q9H089 658 aaKnown RBP7.53□□□□□ -1.2
CHD9-217ENST00000565832 GOPCQ9HD26 462 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 DIAPH3Q9NSV4 1193 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 LHX6Q9UPM6 363 aa7.53□□□□□ -1.2
CHD9-217ENST00000565832 TAF1LQ8IZX4 1826 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 PDE8BO95263 885 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 RXRBP28702 533 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 GORABQ5T7V8 394 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 ZNF772Q68DY9 489 aaPredicted RBP7.52□□□□□ -1.21
CHD9-217ENST00000565832 NBPF5PQ86XG9 351 aaPredicted RBP7.52□□□□□ -1.21
CHD9-217ENST00000565832 TTC13Q8NBP0 860 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 UPF3BQ9BZI7 483 aaKnown RBP7.52□□□□□ -1.21
CHD9-217ENST00000565832 SCUBE2Q9NQ36 999 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 APBA3O96018 575 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 IFIT1P09914 478 aaKnown RBP7.52□□□□□ -1.21
CHD9-217ENST00000565832 CPA1P15085 419 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 PRSS12P56730 875 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 ATP2B3Q16720 1220 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 TXNRD1Q16881 649 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 MPHOSPH8Q99549 860 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 ANP32EQ9BTT0 268 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 RBM27Q9P2N5 1060 aaKnown RBP7.52□□□□□ -1.21
CHD9-217ENST00000565832 TAF6LQ9Y6J9 622 aa7.52□□□□□ -1.21
CHD9-217ENST00000565832 LY75O60449 1722 aa7.51□□□□□ -1.21
CHD9-217ENST00000565832 ABCC12Q96J65 1359 aa7.51□□□□□ -1.21
CHD9-217ENST00000565832 DTNBO60941 627 aa7.51□□□□□ -1.21
CHD9-217ENST00000565832 NEK4P51957 841 aa7.51□□□□□ -1.21
CHD9-217ENST00000565832 NFIXQ14938 502 aa7.51□□□□□ -1.21
CHD9-217ENST00000565832 CCDC152Q4G0S7 254 aa7.51□□□□□ -1.21
CHD9-217ENST00000565832 NOL8Q76FK4 1167 aaKnown RBP7.51□□□□□ -1.21
CHD9-217ENST00000565832 CELF1Q92879 486 aaKnown RBP7.51□□□□□ -1.21
CHD9-217ENST00000565832 GPR108Q9NPR9 543 aa7.51□□□□□ -1.21
CHD9-217ENST00000565832 FAM217BQ9NTX9 383 aaPredicted RBP7.51□□□□□ -1.21
CHD9-217ENST00000565832 PAG1Q9NWQ8 432 aa7.51□□□□□ -1.21
CHD9-217ENST00000565832 DDX60Q8IY21 1712 aaKnown RBP7.51□□□□□ -1.21
CHD9-217ENST00000565832 ZNF609O15014 1411 aa7.51□□□□□ -1.21
CHD9-217ENST00000565832 RIC1Q4ADV7 1423 aa7.51□□□□□ -1.21
CHD9-217ENST00000565832 HSPA4P34932 840 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 MCAMP43121 646 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 ZAP70P43403 619 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 PHKA1P46020 1223 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 ADCK5Q3MIX3 580 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 TTC39AQ5SRH9 613 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 KIAA1211Q6ZU35 1233 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 HSCBQ8IWL3 235 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 SNX21Q969T3 373 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 BEGAINQ9BUH8 593 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 AKAP2Q9Y2D5 859 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 ZNF831Q5JPB2 1677 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 C4BP0C0L5 1744 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 NPHP1O15259 732 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 GYS1P13807 737 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 COL9A1P20849 921 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 BCAMP50895 628 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 CHRNDQ07001 517 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 CCDC158Q5M9N0 1113 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 PRPF40BQ6NWY9 871 aaKnown RBP7.5□□□□□ -1.21
CHD9-217ENST00000565832 TPTE2Q6XPS3 522 aa7.5□□□□□ -1.21
CHD9-217ENST00000565832 IQSEC3Q9UPP2 1182 aaPredicted RBP7.5□□□□□ -1.21
CHD9-217ENST00000565832 CICQ96RK0 1608 aaPredicted RBP7.5□□□□□ -1.21
CHD9-217ENST00000565832 SPEF2Q9C093 1822 aa7.49□□□□□ -1.21
CHD9-217ENST00000565832 A0A0G2JLW4 131 aa7.49□□□□□ -1.21
CHD9-217ENST00000565832 TM4SF1P30408 202 aa7.49□□□□□ -1.21
CHD9-217ENST00000565832 RABEP1Q15276 862 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms