RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 CCNJLQ8IV13 435 aa7.59□□□□□ -1.19
CHD9-210ENST00000564582 KLHL23Q8NBE8 558 aa7.59□□□□□ -1.19
CHD9-210ENST00000564582 WNT8BQ93098 351 aa7.59□□□□□ -1.19
CHD9-210ENST00000564582 SOX13Q9UN79 622 aa7.59□□□□□ -1.19
CHD9-210ENST00000564582 CDC25BP30305 580 aa7.58□□□□□ -1.2
CHD9-210ENST00000564582 PIP4K2BP78356 416 aa7.58□□□□□ -1.2
CHD9-210ENST00000564582 GRIK4Q16099 956 aa7.58□□□□□ -1.2
CHD9-210ENST00000564582 IGF2-ASQ6U949 168 aa7.58□□□□□ -1.2
CHD9-210ENST00000564582 A0A096LPE4 126 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 A0A1W2PPZ6 126 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 FSCN2O14926 492 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 DEAF1O75398 565 aaPredicted RBP7.57□□□□□ -1.2
CHD9-210ENST00000564582 IKBKEQ14164 716 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 SETDB1Q15047 1291 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 PLA2G4EQ3MJ16 856 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 TMCO4Q5TGY1 634 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 TXNDC11Q6PKC3 985 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 EPS8L3Q8TE67 593 aaKnown RBP7.57□□□□□ -1.2
CHD9-210ENST00000564582 LENG1Q96BZ8 264 aaPredicted RBP7.57□□□□□ -1.2
CHD9-210ENST00000564582 TCF12Q99081 682 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 OSGEPQ9NPF4 335 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 SEC31BQ9NQW1 1179 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 USP21Q9UK80 565 aa7.57□□□□□ -1.2
CHD9-210ENST00000564582 C1QTNF9BB2RNN3 333 aa7.56□□□□□ -1.2
CHD9-210ENST00000564582 IGHA1P01876 353 aa7.56□□□□□ -1.2
CHD9-210ENST00000564582 P4HBP07237 508 aaKnown RBP7.56□□□□□ -1.2
CHD9-210ENST00000564582 EAPPQ56P03 285 aaPredicted RBP7.56□□□□□ -1.2
CHD9-210ENST00000564582 PRPF40BQ6NWY9 871 aaKnown RBP7.56□□□□□ -1.2
CHD9-210ENST00000564582 ZFYVE1Q9HBF4 777 aa7.56□□□□□ -1.2
CHD9-210ENST00000564582 USP35Q9P2H5 1018 aa7.56□□□□□ -1.2
CHD9-210ENST00000564582 GOLGA3Q08378 1498 aa7.55□□□□□ -1.2
CHD9-210ENST00000564582 DLL1O00548 723 aa7.55□□□□□ -1.2
CHD9-210ENST00000564582 GIPC1O14908 333 aa7.55□□□□□ -1.2
CHD9-210ENST00000564582 LDHBP07195 334 aaKnown RBP7.55□□□□□ -1.2
CHD9-210ENST00000564582 CD68P34810 354 aaPredicted RBP7.55□□□□□ -1.2
CHD9-210ENST00000564582 GRM2Q14416 872 aa7.55□□□□□ -1.2
CHD9-210ENST00000564582 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.55□□□□□ -1.2
CHD9-210ENST00000564582 ADAMTSL4Q6UY14 1074 aa7.55□□□□□ -1.2
CHD9-210ENST00000564582 CD163Q86VB7 1156 aa7.55□□□□□ -1.2
CHD9-210ENST00000564582 DDX54Q8TDD1 881 aaKnown RBP7.55□□□□□ -1.2
CHD9-210ENST00000564582 UBE2Q2Q8WVN8 375 aa7.55□□□□□ -1.2
CHD9-210ENST00000564582 SLC7A3Q8WY07 619 aa7.55□□□□□ -1.2
CHD9-210ENST00000564582 SRCIN1Q9C0H9 1055 aa7.55□□□□□ -1.2
CHD9-210ENST00000564582 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
CHD9-210ENST00000564582 CLEC4MQ9H2X3 399 aaPredicted RBP7.55□□□□□ -1.2
CHD9-210ENST00000564582 SPG7Q9UQ90 795 aa7.55□□□□□ -1.2
CHD9-210ENST00000564582 METTL12A8MUP2 240 aa7.54□□□□□ -1.2
CHD9-210ENST00000564582 XRCC5P13010 732 aaKnown RBP7.54□□□□□ -1.2
CHD9-210ENST00000564582 SELPP16109 830 aa7.54□□□□□ -1.2
CHD9-210ENST00000564582 CHRNA4P43681 627 aa7.54□□□□□ -1.2
CHD9-210ENST00000564582 GRIA4P48058 902 aa7.54□□□□□ -1.2
CHD9-210ENST00000564582 PTPN12Q05209 780 aaKnown RBP7.54□□□□□ -1.2
CHD9-210ENST00000564582 C19orf57Q0VDD7 668 aa7.54□□□□□ -1.2
CHD9-210ENST00000564582 SUZ12Q15022 739 aaKnown RBP7.54□□□□□ -1.2
CHD9-210ENST00000564582 GPAT2Q6NUI2 795 aa7.54□□□□□ -1.2
CHD9-210ENST00000564582 DNAJC14Q6Y2X3 702 aaPredicted RBP7.54□□□□□ -1.2
CHD9-210ENST00000564582 VN1R5Q7Z5H4 357 aa7.54□□□□□ -1.2
CHD9-210ENST00000564582 FRMD6Q96NE9 622 aa7.54□□□□□ -1.2
CHD9-210ENST00000564582 CARD10Q9BWT7 1032 aa7.54□□□□□ -1.2
CHD9-210ENST00000564582 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
CHD9-210ENST00000564582 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
CHD9-210ENST00000564582 MSTNO14793 375 aa7.53□□□□□ -1.2
CHD9-210ENST00000564582 ITPKAP23677 461 aa7.53□□□□□ -1.2
CHD9-210ENST00000564582 SPRED3Q2MJR0 410 aa7.53□□□□□ -1.2
CHD9-210ENST00000564582 SHISA2Q6UWI4 295 aa7.53□□□□□ -1.2
CHD9-210ENST00000564582 DTHD1Q6ZMT9 781 aa7.53□□□□□ -1.2
CHD9-210ENST00000564582 SOX17Q9H6I2 414 aaPredicted RBP7.53□□□□□ -1.2
CHD9-210ENST00000564582 ABCB6Q9NP58 842 aa7.53□□□□□ -1.2
CHD9-210ENST00000564582 PRPF40AO75400 957 aaKnown RBP7.52□□□□□ -1.21
CHD9-210ENST00000564582 ESRRAP11474 423 aaPredicted RBP7.52□□□□□ -1.21
CHD9-210ENST00000564582 DEKP35659 375 aaKnown RBP7.52□□□□□ -1.21
CHD9-210ENST00000564582 GATA4P43694 442 aa7.52□□□□□ -1.21
CHD9-210ENST00000564582 PCDH1Q08174 1060 aa7.52□□□□□ -1.21
CHD9-210ENST00000564582 ADGRE1Q14246 886 aa7.52□□□□□ -1.21
CHD9-210ENST00000564582 GLIPR1L2Q4G1C9 344 aa7.52□□□□□ -1.21
CHD9-210ENST00000564582 PI16Q6UXB8 463 aa7.52□□□□□ -1.21
CHD9-210ENST00000564582 NPAS4Q8IUM7 802 aa7.52□□□□□ -1.21
CHD9-210ENST00000564582 GALNT11Q8NCW6 608 aa7.52□□□□□ -1.21
CHD9-210ENST00000564582 ZNF576Q9H609 170 aa7.52□□□□□ -1.21
CHD9-210ENST00000564582 BAZ1BQ9UIG0 1483 aaKnown RBP7.51□□□□□ -1.21
CHD9-210ENST00000564582 SOX1O00570 391 aaPredicted RBP7.51□□□□□ -1.21
CHD9-210ENST00000564582 ITGAEP38570 1179 aa7.51□□□□□ -1.21
CHD9-210ENST00000564582 FCGRTP55899 365 aa7.51□□□□□ -1.21
CHD9-210ENST00000564582 DUOXA2Q1HG44 320 aa7.51□□□□□ -1.21
CHD9-210ENST00000564582 RPS26P11Q5JNZ5 115 aaPredicted RBP7.51□□□□□ -1.21
CHD9-210ENST00000564582 TXNRD3Q86VQ6 643 aa7.51□□□□□ -1.21
CHD9-210ENST00000564582 KLHDC7BQ96G42 594 aa7.51□□□□□ -1.21
CHD9-210ENST00000564582 WWC3Q9ULE0 1092 aa7.51□□□□□ -1.21
CHD9-210ENST00000564582 CEP164Q9UPV0 1460 aa7.5□□□□□ -1.21
CHD9-210ENST00000564582 GSTT1P30711 240 aa7.5□□□□□ -1.21
CHD9-210ENST00000564582 MBTPS1Q14703 1052 aa7.5□□□□□ -1.21
CHD9-210ENST00000564582 FOXD4L6Q3SYB3 417 aaPredicted RBP7.5□□□□□ -1.21
CHD9-210ENST00000564582 NXPE4Q6UWF7 544 aa7.5□□□□□ -1.21
CHD9-210ENST00000564582 FOXD4L3Q6VB84 417 aaPredicted RBP7.5□□□□□ -1.21
CHD9-210ENST00000564582 TMEM130Q8N3G9 435 aa7.5□□□□□ -1.21
CHD9-210ENST00000564582 GLIS3Q8NEA6 775 aa7.5□□□□□ -1.21
CHD9-210ENST00000564582 AKTIPQ9H8T0 292 aa7.5□□□□□ -1.21
CHD9-210ENST00000564582 CUX2O14529 1486 aa7.49□□□□□ -1.21
CHD9-210ENST00000564582 ANP32CO43423 234 aa7.49□□□□□ -1.21
CHD9-210ENST00000564582 GNA15P30679 374 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms