RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 DMRTB1Q96MA1 342 aa9.08□□□□□ -0.96
UBR1-205ENST00000564540 BHLHE41Q9C0J9 482 aaPredicted RBP9.08□□□□□ -0.96
UBR1-205ENST00000564540 NPHS2Q9NP85 383 aa9.08□□□□□ -0.96
UBR1-205ENST00000564540 DDX3YO15523 660 aaKnown RBP9.07□□□□□ -0.96
UBR1-205ENST00000564540 WISP1O95388 367 aa9.07□□□□□ -0.96
UBR1-205ENST00000564540 CD68P34810 354 aaPredicted RBP9.07□□□□□ -0.96
UBR1-205ENST00000564540 CABP4P57796 275 aa9.07□□□□□ -0.96
UBR1-205ENST00000564540 VN1R5Q7Z5H4 357 aa9.07□□□□□ -0.96
UBR1-205ENST00000564540 KLHDC7BQ96G42 594 aa9.07□□□□□ -0.96
UBR1-205ENST00000564540 MRPL18Q9H0U6 180 aaKnown RBP9.07□□□□□ -0.96
UBR1-205ENST00000564540 PDIA4P13667 645 aaKnown RBP9.06□□□□□ -0.96
UBR1-205ENST00000564540 AEBP1Q8IUX7 1158 aa9.06□□□□□ -0.96
UBR1-205ENST00000564540 AGGF1Q8N302 714 aaeCLIP9.06□□□□□ -0.96
UBR1-205ENST00000564540 SLC7A3Q8WY07 619 aa9.06□□□□□ -0.96
UBR1-205ENST00000564540 ALKBH8Q96BT7 664 aaKnown RBP9.06□□□□□ -0.96
UBR1-205ENST00000564540 SEC31BQ9NQW1 1179 aa9.06□□□□□ -0.96
UBR1-205ENST00000564540 F8W735 103 aaPredicted RBP9.05□□□□□ -0.96
UBR1-205ENST00000564540 ADAM11O75078 769 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 PIP4K2BP78356 416 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 NBPF11Q86T75 865 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 CCNJLQ8IV13 435 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 KLHL23Q8NBE8 558 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 CCDC74AQ96AQ1 378 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 TCF12Q99081 682 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 AKTIPQ9H8T0 292 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 LIN7BQ9HAP6 207 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 GOLGA2P5Q9HBQ8 144 aa9.05□□□□□ -0.96
UBR1-205ENST00000564540 SOX1O00570 391 aaPredicted RBP9.04□□□□□ -0.96
UBR1-205ENST00000564540 GRIA4P48058 902 aa9.04□□□□□ -0.96
UBR1-205ENST00000564540 SPRED3Q2MJR0 410 aa9.04□□□□□ -0.96
UBR1-205ENST00000564540 TMEM130Q8N3G9 435 aa9.04□□□□□ -0.96
UBR1-205ENST00000564540 DCAF11Q8TEB1 546 aa9.04□□□□□ -0.96
UBR1-205ENST00000564540 FOXD4L4Q8WXT5 416 aaPredicted RBP9.04□□□□□ -0.96
UBR1-205ENST00000564540 MEGF10Q96KG7 1140 aa9.04□□□□□ -0.96
UBR1-205ENST00000564540 SSBP4Q9BWG4 385 aaPredicted RBP9.04□□□□□ -0.96
UBR1-205ENST00000564540 DNAJC25Q9H1X3 360 aa9.04□□□□□ -0.96
UBR1-205ENST00000564540 NLRP12P59046 1061 aa9.03□□□□□ -0.96
UBR1-205ENST00000564540 IKBKEQ14164 716 aa9.03□□□□□ -0.96
UBR1-205ENST00000564540 DSC3Q14574 896 aa9.03□□□□□ -0.96
UBR1-205ENST00000564540 PRSS36Q5K4E3 855 aa9.03□□□□□ -0.96
UBR1-205ENST00000564540 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.03□□□□□ -0.96
UBR1-205ENST00000564540 EPS8L3Q8TE67 593 aaKnown RBP9.03□□□□□ -0.96
UBR1-205ENST00000564540 UBASH3BQ8TF42 649 aa9.03□□□□□ -0.96
UBR1-205ENST00000564540 EHD4Q9H223 541 aa9.03□□□□□ -0.96
UBR1-205ENST00000564540 A0A096LPE4 126 aa9.02□□□□□ -0.97
UBR1-205ENST00000564540 A0A1W2PPZ6 126 aa9.02□□□□□ -0.97
UBR1-205ENST00000564540 TREHO43280 583 aa9.02□□□□□ -0.97
UBR1-205ENST00000564540 KIAA0319Q5VV43 1072 aa9.02□□□□□ -0.97
UBR1-205ENST00000564540 ACAD11Q709F0 780 aa9.02□□□□□ -0.97
UBR1-205ENST00000564540 WNT8BQ93098 351 aa9.02□□□□□ -0.97
UBR1-205ENST00000564540 TP53INP1Q96A56 240 aa9.02□□□□□ -0.97
UBR1-205ENST00000564540 ESRRAP11474 423 aaPredicted RBP9.01□□□□□ -0.97
UBR1-205ENST00000564540 C19orf57Q0VDD7 668 aa9.01□□□□□ -0.97
UBR1-205ENST00000564540 LRP8Q14114 963 aa9.01□□□□□ -0.97
UBR1-205ENST00000564540 DUOXA2Q1HG44 320 aa9.01□□□□□ -0.97
UBR1-205ENST00000564540 PI16Q6UXB8 463 aa9.01□□□□□ -0.97
UBR1-205ENST00000564540 KIAA1211Q6ZU35 1233 aa9.01□□□□□ -0.97
UBR1-205ENST00000564540 OSGEPQ9NPF4 335 aa9.01□□□□□ -0.97
UBR1-205ENST00000564540 PATL2C9JE40 543 aaKnown RBP9□□□□□ -0.97
UBR1-205ENST00000564540 GADD45BO75293 160 aaPredicted RBP9□□□□□ -0.97
UBR1-205ENST00000564540 PLCB3Q01970 1234 aa9□□□□□ -0.97
UBR1-205ENST00000564540 PNMA6FA0A0J9YX94 578 aa8.99□□□□□ -0.97
UBR1-205ENST00000564540 GLB1P16278 677 aa8.99□□□□□ -0.97
UBR1-205ENST00000564540 ARL4DP49703 201 aa8.98□□□□□ -0.97
UBR1-205ENST00000564540 PCDH1Q08174 1060 aa8.98□□□□□ -0.97
UBR1-205ENST00000564540 GRM2Q14416 872 aa8.98□□□□□ -0.97
UBR1-205ENST00000564540 ZNF423Q2M1K9 1284 aa8.98□□□□□ -0.97
UBR1-205ENST00000564540 Q6ZS46 218 aa8.98□□□□□ -0.97
UBR1-205ENST00000564540 ZSCAN29Q8IWY8 852 aaPredicted RBP8.98□□□□□ -0.97
UBR1-205ENST00000564540 DZIP1LQ8IYY4 767 aaKnown RBP8.98□□□□□ -0.97
UBR1-205ENST00000564540 ASB16Q96NS5 453 aa8.98□□□□□ -0.97
UBR1-205ENST00000564540 ABCB6Q9NP58 842 aa8.98□□□□□ -0.97
UBR1-205ENST00000564540 H2AFB1P0C5Y9 115 aa8.97□□□□□ -0.97
UBR1-205ENST00000564540 H2AFB2P0C5Z0 115 aa8.97□□□□□ -0.97
UBR1-205ENST00000564540 ENOX2Q16206 610 aaKnown RBP8.97□□□□□ -0.97
UBR1-205ENST00000564540 UBL7Q96S82 380 aaPredicted RBP8.97□□□□□ -0.97
UBR1-205ENST00000564540 CLEC4MQ9H2X3 399 aaPredicted RBP8.97□□□□□ -0.97
UBR1-205ENST00000564540 MAPK8P45983 427 aa8.96□□□□□ -0.98
UBR1-205ENST00000564540 GSTM4Q03013 218 aa8.96□□□□□ -0.98
UBR1-205ENST00000564540 GLIS3Q8NEA6 775 aa8.96□□□□□ -0.98
UBR1-205ENST00000564540 SETDB2Q96T68 719 aa8.96□□□□□ -0.98
UBR1-205ENST00000564540 USP26Q9BXU7 913 aa8.96□□□□□ -0.98
UBR1-205ENST00000564540 ITPKAP23677 461 aa8.95□□□□□ -0.98
UBR1-205ENST00000564540 FMR1Q06787 632 aaKnown RBP eCLIP8.95□□□□□ -0.98
UBR1-205ENST00000564540 PRPF40BQ6NWY9 871 aaKnown RBP8.95□□□□□ -0.98
UBR1-205ENST00000564540 ZNF576Q9H609 170 aa8.95□□□□□ -0.98
UBR1-205ENST00000564540 SOX17Q9H6I2 414 aaPredicted RBP8.95□□□□□ -0.98
UBR1-205ENST00000564540 NLRP2Q9NX02 1062 aa8.95□□□□□ -0.98
UBR1-205ENST00000564540 TMEM238LA0A1B0GVL6 79 aa8.94□□□□□ -0.98
UBR1-205ENST00000564540 HYAL3O43820 417 aaPredicted RBP8.94□□□□□ -0.98
UBR1-205ENST00000564540 DLGAP3O95886 979 aa8.94□□□□□ -0.98
UBR1-205ENST00000564540 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.94□□□□□ -0.98
UBR1-205ENST00000564540 SND1Q7KZF4 910 aaKnown RBP eCLIP8.94□□□□□ -0.98
UBR1-205ENST00000564540 WWC3Q9ULE0 1092 aa8.94□□□□□ -0.98
UBR1-205ENST00000564540 LOC100289279A0A1B0GTE1 492 aa8.93□□□□□ -0.98
UBR1-205ENST00000564540 RUSC1Q9BVN2 902 aa8.93□□□□□ -0.98
UBR1-205ENST00000564540 BCO2Q9BYV7 579 aa8.93□□□□□ -0.98
UBR1-205ENST00000564540 NRSN2Q9GZP1 204 aa8.93□□□□□ -0.98
UBR1-205ENST00000564540 TRAK1Q9UPV9 953 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms