RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 GRM8O00222 908 aa21.34■■□□□ 1.01
HDGFL3-203ENST00000563404 DLGAP5Q15398 846 aa21.34■■□□□ 1.01
HDGFL3-203ENST00000563404 DEFB129Q9H1M3 183 aa21.34■■□□□ 1.01
HDGFL3-203ENST00000563404 JAG2Q9Y219 1238 aa21.34■■□□□ 1.01
HDGFL3-203ENST00000563404 SSC5DA1L4H1 1573 aa21.33■■□□□ 1.01
HDGFL3-203ENST00000563404 F8W031 263 aaPredicted RBP21.33■■□□□ 1.01
HDGFL3-203ENST00000563404 SOX10P56693 466 aa21.33■■□□□ 1.01
HDGFL3-203ENST00000563404 ARMC9Q7Z3E5 817 aa21.33■■□□□ 1.01
HDGFL3-203ENST00000563404 ZNF296Q8WUU4 475 aaPredicted RBP21.33■■□□□ 1.01
HDGFL3-203ENST00000563404 ANGEL1Q9UNK9 670 aaKnown RBP21.33■■□□□ 1.01
HDGFL3-203ENST00000563404 PLIN1O60240 522 aa21.32■■□□□ 1
HDGFL3-203ENST00000563404 CCDC57Q2TAC2 916 aa21.32■■□□□ 1
HDGFL3-203ENST00000563404 CFAP100Q494V2 611 aa21.32■■□□□ 1
HDGFL3-203ENST00000563404 LDHAL6AQ6ZMR3 332 aa21.32■■□□□ 1
HDGFL3-203ENST00000563404 ZNF804AQ7Z570 1209 aa21.32■■□□□ 1
HDGFL3-203ENST00000563404 R3HDMLQ9H3Y0 253 aa21.32■■□□□ 1
HDGFL3-203ENST00000563404 COL1A1P02452 1464 aaPredicted RBP21.32■■□□□ 1
HDGFL3-203ENST00000563404 FKBP1AP62942 108 aaKnown RBP21.31■■□□□ 1
HDGFL3-203ENST00000563404 SPRYD7Q5W111 196 aa21.31■■□□□ 1
HDGFL3-203ENST00000563404 KAZALD1Q96I82 304 aa21.31■■□□□ 1
HDGFL3-203ENST00000563404 PRMT6Q96LA8 375 aaPredicted RBP21.31■■□□□ 1
HDGFL3-203ENST00000563404 CLRN2A0PK11 232 aa21.3■■□□□ 1
HDGFL3-203ENST00000563404 SPDYE2BA6NHP3 402 aa21.3■■□□□ 1
HDGFL3-203ENST00000563404 SPDYE6P0CI01 402 aa21.3■■□□□ 1
HDGFL3-203ENST00000563404 SUCLG2Q96I99 432 aa21.3■■□□□ 1
HDGFL3-203ENST00000563404 PUS3Q9BZE2 481 aaKnown RBP21.3■■□□□ 1
HDGFL3-203ENST00000563404 CNNM1Q9NRU3 951 aa21.3■■□□□ 1
HDGFL3-203ENST00000563404 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
HDGFL3-203ENST00000563404 GPR25O00155 361 aa21.29■■□□□ 1
HDGFL3-203ENST00000563404 ALDH1L1O75891 902 aa21.29■■□□□ 1
HDGFL3-203ENST00000563404 MAP3K11Q16584 847 aa21.29■■□□□ 1
HDGFL3-203ENST00000563404 TAF7LQ5H9L4 462 aa21.29■■□□□ 1
HDGFL3-203ENST00000563404 SLC4A10Q6U841 1118 aa21.29■■□□□ 1
HDGFL3-203ENST00000563404 FAM9BQ8IZU0 186 aa21.29■■□□□ 1
HDGFL3-203ENST00000563404 C9orf78Q9NZ63 289 aaPredicted RBP21.29■■□□□ 1
HDGFL3-203ENST00000563404 HPS5Q9UPZ3 1129 aa21.29■■□□□ 1
HDGFL3-203ENST00000563404 ECM29Q5VYK3 1845 aa21.28■■□□□ 1
HDGFL3-203ENST00000563404 SREBF2Q12772 1141 aa21.28■■□□□ 1
HDGFL3-203ENST00000563404 CLMNQ96JQ2 1002 aa21.28■■□□□ 1
HDGFL3-203ENST00000563404 CFHR5Q9BXR6 569 aa21.28■■□□□ 1
HDGFL3-203ENST00000563404 SRCIN1Q9C0H9 1055 aa21.28■■□□□ 1
HDGFL3-203ENST00000563404 NBPF7P0C2Y1 421 aaPredicted RBP21.27■■□□□ 1
HDGFL3-203ENST00000563404 NOM1Q5C9Z4 860 aaKnown RBP21.27■■□□□ 1
HDGFL3-203ENST00000563404 NBPF12Q5TAG4 269 aaPredicted RBP21.27■■□□□ 1
HDGFL3-203ENST00000563404 TDRD7Q8NHU6 1098 aaKnown RBP21.27■■□□□ 1
HDGFL3-203ENST00000563404 PPP2R3BQ9Y5P8 575 aa21.27■■□□□ 1
HDGFL3-203ENST00000563404 FAM205AQ6ZU69 1335 aa21.27■□□□□ 0.99
HDGFL3-203ENST00000563404 ZNF521Q96K83 1311 aa21.27■□□□□ 0.99
HDGFL3-203ENST00000563404 SLC34A2O95436 690 aa21.26■□□□□ 0.99
HDGFL3-203ENST00000563404 GYG1P46976 350 aa21.26■□□□□ 0.99
HDGFL3-203ENST00000563404 FAM84BQ96KN1 310 aaPredicted RBP21.26■□□□□ 0.99
HDGFL3-203ENST00000563404 VEZTQ9HBM0 779 aa21.26■□□□□ 0.99
HDGFL3-203ENST00000563404 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.26■□□□□ 0.99
HDGFL3-203ENST00000563404 UBE4AQ14139 1066 aa21.25■□□□□ 0.99
HDGFL3-203ENST00000563404 PKN2Q16513 984 aaKnown RBP21.25■□□□□ 0.99
HDGFL3-203ENST00000563404 SLC10A4Q96EP9 437 aa21.25■□□□□ 0.99
HDGFL3-203ENST00000563404 RIPOR2Q9Y4F9 1068 aa21.25■□□□□ 0.99
HDGFL3-203ENST00000563404 UTYO14607 1347 aa21.25■□□□□ 0.99
HDGFL3-203ENST00000563404 MYO1BO43795 1136 aa21.24■□□□□ 0.99
HDGFL3-203ENST00000563404 RBM5P52756 815 aaKnown RBP eCLIP21.24■□□□□ 0.99
HDGFL3-203ENST00000563404 WNK4Q96J92 1243 aa21.24■□□□□ 0.99
HDGFL3-203ENST00000563404 FKTNO75072 461 aa21.23■□□□□ 0.99
HDGFL3-203ENST00000563404 USP2O75604 605 aaPredicted RBP21.23■□□□□ 0.99
HDGFL3-203ENST00000563404 HIBADHP31937 336 aaKnown RBP21.23■□□□□ 0.99
HDGFL3-203ENST00000563404 GJA5P36382 358 aa21.23■□□□□ 0.99
HDGFL3-203ENST00000563404 RASA3Q14644 834 aa21.23■□□□□ 0.99
HDGFL3-203ENST00000563404 MFSD14BQ5SR56 506 aa21.23■□□□□ 0.99
HDGFL3-203ENST00000563404 IFNL1Q8IU54 200 aa21.23■□□□□ 0.99
HDGFL3-203ENST00000563404 BICC1Q9H694 974 aaKnown RBP21.23■□□□□ 0.99
HDGFL3-203ENST00000563404 MANSC4A6NHS7 340 aaPredicted RBP21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 IGF2BP3O00425 579 aaKnown RBP eCLIP21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 PPP1R12BO60237 982 aaPredicted RBP21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 ZBTB48P10074 688 aaPredicted RBP21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 GRIK5Q16478 980 aa21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 RABL6Q3YEC7 729 aaPredicted RBP21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 SUPT20HL1Q3ZLR7 823 aa21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 CDAN1Q8IWY9 1227 aa21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 MRPL50Q8N5N7 158 aaKnown RBP21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 ANKRD44Q8N8A2 993 aa21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 TTF2Q9UNY4 1162 aaKnown RBP21.22■□□□□ 0.99
HDGFL3-203ENST00000563404 SPDYE2Q495Y8 402 aa21.21■□□□□ 0.99
HDGFL3-203ENST00000563404 LRRC24Q50LG9 513 aa21.21■□□□□ 0.99
HDGFL3-203ENST00000563404 TDRD3Q9H7E2 651 aaKnown RBP21.21■□□□□ 0.99
HDGFL3-203ENST00000563404 ZNF70Q9UC06 446 aaPredicted RBP21.21■□□□□ 0.99
HDGFL3-203ENST00000563404 SERPINA10Q9UK55 444 aa21.21■□□□□ 0.99
HDGFL3-203ENST00000563404 LAMB1P07942 1786 aa21.2■□□□□ 0.99
HDGFL3-203ENST00000563404 UNCXA6NJT0 531 aa21.2■□□□□ 0.98
HDGFL3-203ENST00000563404 ALDH1A1P00352 501 aa21.2■□□□□ 0.98
HDGFL3-203ENST00000563404 FBXO46Q6PJ61 603 aaPredicted RBP21.2■□□□□ 0.98
HDGFL3-203ENST00000563404 FBXO33Q7Z6M2 555 aa21.2■□□□□ 0.98
HDGFL3-203ENST00000563404 HTTP42858 3142 aa21.2■□□□□ 0.98
HDGFL3-203ENST00000563404 ARAP2Q8WZ64 1704 aa21.19■□□□□ 0.98
HDGFL3-203ENST00000563404 INHBEP58166 350 aa21.19■□□□□ 0.98
HDGFL3-203ENST00000563404 DZIP1LQ8IYY4 767 aaKnown RBP21.19■□□□□ 0.98
HDGFL3-203ENST00000563404 TEPSINQ96N21 525 aa21.19■□□□□ 0.98
HDGFL3-203ENST00000563404 IQSEC3Q9UPP2 1182 aaPredicted RBP21.19■□□□□ 0.98
HDGFL3-203ENST00000563404 MROH5Q6ZUA9 1318 aa21.19■□□□□ 0.98
HDGFL3-203ENST00000563404 PDE4DIPQ5VU43 2346 aa21.18■□□□□ 0.98
HDGFL3-203ENST00000563404 IREB2P48200 963 aaKnown RBP21.18■□□□□ 0.98
HDGFL3-203ENST00000563404 VGLL2Q8N8G2 317 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms