RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 CAPNS2Q96L46 248 aa13.9□□□□□ -0.18
LPCAT4-202ENST00000562404 IQSEC3Q9UPP2 1182 aaPredicted RBP13.9□□□□□ -0.18
LPCAT4-202ENST00000562404 PA2G4Q9UQ80 394 aaKnown RBP13.9□□□□□ -0.18
LPCAT4-202ENST00000562404 F8W031 263 aaPredicted RBP13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 EYA2O00167 538 aa13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 AOC2O75106 756 aa13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 FGFR2P21802 821 aa13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 HIBADHP31937 336 aaKnown RBP13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 GRM1Q13255 1194 aa13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 GRIK5Q16478 980 aa13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 COL13A1Q5TAT6 717 aaPredicted RBP13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 PRAMEF18Q5VWM3 479 aa13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 FBXO33Q7Z6M2 555 aa13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 CDCA5Q96FF9 252 aa13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 SIL1Q9H173 461 aa13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 FAM205AQ6ZU69 1335 aa13.89□□□□□ -0.19
LPCAT4-202ENST00000562404 FOXN1O15353 648 aa13.88□□□□□ -0.19
LPCAT4-202ENST00000562404 PAXIP1Q6ZW49 1069 aaPredicted RBP13.88□□□□□ -0.19
LPCAT4-202ENST00000562404 SULF1Q8IWU6 871 aa13.88□□□□□ -0.19
LPCAT4-202ENST00000562404 OGFOD1Q8N543 542 aa13.88□□□□□ -0.19
LPCAT4-202ENST00000562404 TMEM57Q8N5G2 664 aa13.88□□□□□ -0.19
LPCAT4-202ENST00000562404 ZIC5Q96T25 663 aa13.88□□□□□ -0.19
LPCAT4-202ENST00000562404 PITPNM2Q9BZ72 1349 aa13.88□□□□□ -0.19
LPCAT4-202ENST00000562404 RLBP1P12271 317 aa13.87□□□□□ -0.19
LPCAT4-202ENST00000562404 BCAMP50895 628 aa13.87□□□□□ -0.19
LPCAT4-202ENST00000562404 FKBP1AP62942 108 aaKnown RBP13.87□□□□□ -0.19
LPCAT4-202ENST00000562404 GBA2Q9HCG7 927 aaPredicted RBP13.87□□□□□ -0.19
LPCAT4-202ENST00000562404 WBP1LQ9NX94 342 aa13.87□□□□□ -0.19
LPCAT4-202ENST00000562404 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.87□□□□□ -0.19
LPCAT4-202ENST00000562404 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
LPCAT4-202ENST00000562404 IPO8O15397 1037 aaKnown RBP13.86□□□□□ -0.19
LPCAT4-202ENST00000562404 HUNKP57058 714 aa13.86□□□□□ -0.19
LPCAT4-202ENST00000562404 ZKSCAN2Q63HK3 967 aa13.86□□□□□ -0.19
LPCAT4-202ENST00000562404 MOB2Q70IA6 237 aa13.86□□□□□ -0.19
LPCAT4-202ENST00000562404 PAPPA2Q9BXP8 1791 aa13.86□□□□□ -0.19
LPCAT4-202ENST00000562404 PUM3Q15397 648 aaKnown RBP13.85□□□□□ -0.19
LPCAT4-202ENST00000562404 CFAP100Q494V2 611 aa13.85□□□□□ -0.19
LPCAT4-202ENST00000562404 MFSD14BQ5SR56 506 aa13.85□□□□□ -0.19
LPCAT4-202ENST00000562404 MTMR14Q8NCE2 650 aa13.85□□□□□ -0.19
LPCAT4-202ENST00000562404 HHIPL1Q96JK4 782 aa13.85□□□□□ -0.19
LPCAT4-202ENST00000562404 PRMT6Q96LA8 375 aaPredicted RBP13.85□□□□□ -0.19
LPCAT4-202ENST00000562404 COPRSQ9NQ92 184 aa13.85□□□□□ -0.19
LPCAT4-202ENST00000562404 HDAC9Q9UKV0 1011 aa13.85□□□□□ -0.19
LPCAT4-202ENST00000562404 PNMA6EA0A0J9YXQ4 647 aa13.84□□□□□ -0.19
LPCAT4-202ENST00000562404 FAM155AB1AL88 458 aaPredicted RBP13.84□□□□□ -0.19
LPCAT4-202ENST00000562404 CIAO1O76071 339 aa13.84□□□□□ -0.19
LPCAT4-202ENST00000562404 GNAI3P08754 354 aa13.84□□□□□ -0.19
LPCAT4-202ENST00000562404 ECE1P42892 770 aa13.84□□□□□ -0.19
LPCAT4-202ENST00000562404 CHAF1AQ13111 956 aaPredicted RBP13.84□□□□□ -0.19
LPCAT4-202ENST00000562404 MTX1Q13505 466 aa13.84□□□□□ -0.19
LPCAT4-202ENST00000562404 CLRN2A0PK11 232 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 SPDYE2BA6NHP3 402 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 SRGAP3O43295 1099 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 SPDYE6P0CI01 402 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 DLGAP5Q15398 846 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 RGMBQ6NW40 437 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 C2orf69Q8N8R5 385 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 LPIN2Q92539 896 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 TTF2Q9UNY4 1162 aaKnown RBP13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 FZD1Q9UP38 647 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 SSC5DA1L4H1 1573 aa13.83□□□□□ -0.2
LPCAT4-202ENST00000562404 IFIT1P09914 478 aaKnown RBP13.82□□□□□ -0.2
LPCAT4-202ENST00000562404 ADORA1P30542 326 aa13.82□□□□□ -0.2
LPCAT4-202ENST00000562404 IL15P40933 162 aaPredicted RBP13.82□□□□□ -0.2
LPCAT4-202ENST00000562404 MMP14P50281 582 aa13.82□□□□□ -0.2
LPCAT4-202ENST00000562404 ATP2B3Q16720 1220 aa13.82□□□□□ -0.2
LPCAT4-202ENST00000562404 CAVIN4Q5BKX8 364 aa13.82□□□□□ -0.2
LPCAT4-202ENST00000562404 VPS37DQ86XT2 251 aa13.82□□□□□ -0.2
LPCAT4-202ENST00000562404 C1orf115Q9H7X2 142 aa13.82□□□□□ -0.2
LPCAT4-202ENST00000562404 UBE2Q2LH0YL09 131 aa13.81□□□□□ -0.2
LPCAT4-202ENST00000562404 GNAI2P04899 355 aa13.81□□□□□ -0.2
LPCAT4-202ENST00000562404 HSPA8P11142 646 aaKnown RBP13.81□□□□□ -0.2
LPCAT4-202ENST00000562404 SLC5A1P13866 664 aa13.81□□□□□ -0.2
LPCAT4-202ENST00000562404 MAP2K2P36507 400 aa13.81□□□□□ -0.2
LPCAT4-202ENST00000562404 PHKA1P46020 1223 aa13.81□□□□□ -0.2
LPCAT4-202ENST00000562404 CEP126Q9P2H0 1117 aa13.81□□□□□ -0.2
LPCAT4-202ENST00000562404 TSKSQ9UJT2 592 aa13.81□□□□□ -0.2
LPCAT4-202ENST00000562404 AKAP11Q9UKA4 1901 aa13.81□□□□□ -0.2
LPCAT4-202ENST00000562404 CASP8AP2Q9UKL3 1982 aa13.81□□□□□ -0.2
LPCAT4-202ENST00000562404 OTOFQ9HC10 1997 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 CRKP46108 304 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 ZNF157P51786 506 aaPredicted RBP13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 RBM5P52756 815 aaKnown RBP eCLIP13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 LBX1P52954 281 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 TIMM10P62072 90 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 MAP2K1Q02750 393 aaPredicted RBP13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 TFCP2Q12800 502 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 PRKG1Q13976 671 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 APOBEC3FQ8IUX4 373 aaKnown RBP13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 CDAN1Q8IWY9 1227 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 DZIP1LQ8IYY4 767 aaKnown RBP13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 PANK1Q8TE04 598 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 DEFB129Q9H1M3 183 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 TDRD3Q9H7E2 651 aaKnown RBP13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 HDAC5Q9UQL6 1122 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 MYH2Q9UKX2 1941 aa13.8□□□□□ -0.2
LPCAT4-202ENST00000562404 ZBTB7BO15156 539 aaPredicted RBP13.79□□□□□ -0.2
LPCAT4-202ENST00000562404 FRAT2O75474 233 aaPredicted RBP13.79□□□□□ -0.2
LPCAT4-202ENST00000562404 SLC10A3P09131 477 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 424.6 ms