RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 LRRC24Q50LG9 513 aa22.55■■□□□ 1.2
TNFAIP2-206ENST00000560428 METTL24Q5JXM2 366 aa22.55■■□□□ 1.2
TNFAIP2-206ENST00000560428 RGMBQ6NW40 437 aa22.55■■□□□ 1.2
TNFAIP2-206ENST00000560428 TDRD7Q8NHU6 1098 aaKnown RBP22.55■■□□□ 1.2
TNFAIP2-206ENST00000560428 BEGAINQ9BUH8 593 aa22.55■■□□□ 1.2
TNFAIP2-206ENST00000560428 HDAC5Q9UQL6 1122 aa22.55■■□□□ 1.2
TNFAIP2-206ENST00000560428 FAM205AQ6ZU69 1335 aa22.55■■□□□ 1.2
TNFAIP2-206ENST00000560428 PDE8BO95263 885 aa22.54■■□□□ 1.2
TNFAIP2-206ENST00000560428 TNS4Q8IZW8 715 aa22.54■■□□□ 1.2
TNFAIP2-206ENST00000560428 VGLL2Q8N8G2 317 aa22.54■■□□□ 1.2
TNFAIP2-206ENST00000560428 MTMR14Q8NCE2 650 aa22.54■■□□□ 1.2
TNFAIP2-206ENST00000560428 FAM84BQ96KN1 310 aaPredicted RBP22.54■■□□□ 1.2
TNFAIP2-206ENST00000560428 ARAP2Q8WZ64 1704 aa22.54■■□□□ 1.2
TNFAIP2-206ENST00000560428 ECM29Q5VYK3 1845 aa22.53■■□□□ 1.2
TNFAIP2-206ENST00000560428 GYG1P46976 350 aa22.53■■□□□ 1.2
TNFAIP2-206ENST00000560428 RFX5P48382 616 aaPredicted RBP22.53■■□□□ 1.2
TNFAIP2-206ENST00000560428 APOBEC3FQ8IUX4 373 aaKnown RBP22.53■■□□□ 1.2
TNFAIP2-206ENST00000560428 HSPA8P11142 646 aaKnown RBP22.52■■□□□ 1.2
TNFAIP2-206ENST00000560428 DLGAP5Q15398 846 aa22.52■■□□□ 1.2
TNFAIP2-206ENST00000560428 KLHDC4Q8TBB5 520 aa22.52■■□□□ 1.2
TNFAIP2-206ENST00000560428 CCDC102AQ96A19 550 aa22.52■■□□□ 1.2
TNFAIP2-206ENST00000560428 COL1A1P02452 1464 aaPredicted RBP22.52■■□□□ 1.2
TNFAIP2-206ENST00000560428 CA12O43570 354 aa22.51■■□□□ 1.19
TNFAIP2-206ENST00000560428 INTS3Q68E01 1043 aaKnown RBP22.51■■□□□ 1.19
TNFAIP2-206ENST00000560428 FBXO33Q7Z6M2 555 aa22.51■■□□□ 1.19
TNFAIP2-206ENST00000560428 FBXO3Q9UK99 471 aa22.51■■□□□ 1.19
TNFAIP2-206ENST00000560428 FAM155AB1AL88 458 aaPredicted RBP22.5■■□□□ 1.19
TNFAIP2-206ENST00000560428 EYA2O00167 538 aa22.5■■□□□ 1.19
TNFAIP2-206ENST00000560428 IPO8O15397 1037 aaKnown RBP22.5■■□□□ 1.19
TNFAIP2-206ENST00000560428 ZNF157P51786 506 aaPredicted RBP22.5■■□□□ 1.19
TNFAIP2-206ENST00000560428 LBX1P52954 281 aa22.5■■□□□ 1.19
TNFAIP2-206ENST00000560428 HNRNPUQ00839 825 aaKnown RBP eCLIP22.5■■□□□ 1.19
TNFAIP2-206ENST00000560428 PTPN12Q05209 780 aaKnown RBP22.5■■□□□ 1.19
TNFAIP2-206ENST00000560428 CAVIN4Q5BKX8 364 aa22.5■■□□□ 1.19
TNFAIP2-206ENST00000560428 PUM3Q15397 648 aaKnown RBP22.49■■□□□ 1.19
TNFAIP2-206ENST00000560428 MFSD14BQ5SR56 506 aa22.49■■□□□ 1.19
TNFAIP2-206ENST00000560428 VPS37DQ86XT2 251 aa22.49■■□□□ 1.19
TNFAIP2-206ENST00000560428 SCAF8Q9UPN6 1271 aaKnown RBP22.49■■□□□ 1.19
TNFAIP2-206ENST00000560428 JAG2Q9Y219 1238 aa22.49■■□□□ 1.19
TNFAIP2-206ENST00000560428 F8W031 263 aaPredicted RBP22.48■■□□□ 1.19
TNFAIP2-206ENST00000560428 SLC10A3P09131 477 aa22.48■■□□□ 1.19
TNFAIP2-206ENST00000560428 FGFR2P21802 821 aa22.48■■□□□ 1.19
TNFAIP2-206ENST00000560428 NF2P35240 595 aa22.48■■□□□ 1.19
TNFAIP2-206ENST00000560428 CFAP100Q494V2 611 aa22.48■■□□□ 1.19
TNFAIP2-206ENST00000560428 SPDYE2BA6NHP3 402 aa22.47■■□□□ 1.19
TNFAIP2-206ENST00000560428 MYO1BO43795 1136 aa22.47■■□□□ 1.19
TNFAIP2-206ENST00000560428 CIAO1O76071 339 aa22.47■■□□□ 1.19
TNFAIP2-206ENST00000560428 IFIT1P09914 478 aaKnown RBP22.47■■□□□ 1.19
TNFAIP2-206ENST00000560428 SPDYE6P0CI01 402 aa22.47■■□□□ 1.19
TNFAIP2-206ENST00000560428 MEIS3Q99687 375 aa22.47■■□□□ 1.19
TNFAIP2-206ENST00000560428 LRRFIP2Q9Y608 721 aaKnown RBP22.47■■□□□ 1.19
TNFAIP2-206ENST00000560428 GNAI3P08754 354 aa22.46■■□□□ 1.19
TNFAIP2-206ENST00000560428 ATF7IPQ6VMQ6 1270 aa22.46■■□□□ 1.19
TNFAIP2-206ENST00000560428 ATG9AQ7Z3C6 839 aa22.46■■□□□ 1.19
TNFAIP2-206ENST00000560428 SERPINA10Q9UK55 444 aa22.46■■□□□ 1.19
TNFAIP2-206ENST00000560428 PPP2R3BQ9Y5P8 575 aa22.46■■□□□ 1.19
TNFAIP2-206ENST00000560428 TRIM27P14373 513 aa22.45■■□□□ 1.18
TNFAIP2-206ENST00000560428 PRAMEF18Q5VWM3 479 aa22.45■■□□□ 1.18
TNFAIP2-206ENST00000560428 TBC1D22AQ8WUA7 517 aa22.45■■□□□ 1.18
TNFAIP2-206ENST00000560428 ZIC5Q96T25 663 aa22.45■■□□□ 1.18
TNFAIP2-206ENST00000560428 BCAR3O75815 825 aa22.44■■□□□ 1.18
TNFAIP2-206ENST00000560428 SLC5A1P13866 664 aa22.44■■□□□ 1.18
TNFAIP2-206ENST00000560428 RASAL3Q86YV0 1011 aa22.44■■□□□ 1.18
TNFAIP2-206ENST00000560428 LPIN2Q92539 896 aa22.44■■□□□ 1.18
TNFAIP2-206ENST00000560428 PRMT6Q96LA8 375 aaPredicted RBP22.44■■□□□ 1.18
TNFAIP2-206ENST00000560428 DEFB129Q9H1M3 183 aa22.44■■□□□ 1.18
TNFAIP2-206ENST00000560428 TTF2Q9UNY4 1162 aaKnown RBP22.44■■□□□ 1.18
TNFAIP2-206ENST00000560428 PCDHAC2Q9Y5I4 1007 aa22.44■■□□□ 1.18
TNFAIP2-206ENST00000560428 FRAT2O75474 233 aaPredicted RBP22.43■■□□□ 1.18
TNFAIP2-206ENST00000560428 KIF23Q02241 960 aaPredicted RBP22.43■■□□□ 1.18
TNFAIP2-206ENST00000560428 REM2Q8IYK8 340 aaPredicted RBP22.43■■□□□ 1.18
TNFAIP2-206ENST00000560428 IL15P40933 162 aaPredicted RBP22.42■■□□□ 1.18
TNFAIP2-206ENST00000560428 BCAMP50895 628 aa22.42■■□□□ 1.18
TNFAIP2-206ENST00000560428 RBM5P52756 815 aaKnown RBP eCLIP22.42■■□□□ 1.18
TNFAIP2-206ENST00000560428 TTLL12Q14166 644 aaPredicted RBP22.42■■□□□ 1.18
TNFAIP2-206ENST00000560428 MOB2Q70IA6 237 aa22.42■■□□□ 1.18
TNFAIP2-206ENST00000560428 FRAT1Q92837 279 aaPredicted RBP22.42■■□□□ 1.18
TNFAIP2-206ENST00000560428 SIL1Q9H173 461 aa22.42■■□□□ 1.18
TNFAIP2-206ENST00000560428 COPRSQ9NQ92 184 aa22.42■■□□□ 1.18
TNFAIP2-206ENST00000560428 IQSEC3Q9UPP2 1182 aaPredicted RBP22.42■■□□□ 1.18
TNFAIP2-206ENST00000560428 MYH13Q9UKX3 1938 aa22.41■■□□□ 1.18
TNFAIP2-206ENST00000560428 ZBED9Q6R2W3 1325 aa22.41■■□□□ 1.18
TNFAIP2-206ENST00000560428 MTX1Q13505 466 aa22.41■■□□□ 1.18
TNFAIP2-206ENST00000560428 ARMC9Q7Z3E5 817 aa22.41■■□□□ 1.18
TNFAIP2-206ENST00000560428 SAGE1Q9NXZ1 904 aa22.41■■□□□ 1.18
TNFAIP2-206ENST00000560428 CEP126Q9P2H0 1117 aa22.41■■□□□ 1.18
TNFAIP2-206ENST00000560428 CLRN2A0PK11 232 aa22.4■■□□□ 1.18
TNFAIP2-206ENST00000560428 UBE2Q2LH0YL09 131 aa22.4■■□□□ 1.18
TNFAIP2-206ENST00000560428 HDLBPQ00341 1268 aaKnown RBP22.4■■□□□ 1.18
TNFAIP2-206ENST00000560428 CHAF1AQ13111 956 aaPredicted RBP22.4■■□□□ 1.18
TNFAIP2-206ENST00000560428 ATP2B3Q16720 1220 aa22.4■■□□□ 1.18
TNFAIP2-206ENST00000560428 ZKSCAN2Q63HK3 967 aa22.4■■□□□ 1.18
TNFAIP2-206ENST00000560428 SUGT1Q9Y2Z0 365 aa22.4■■□□□ 1.18
TNFAIP2-206ENST00000560428 TNFAIP1Q13829 316 aa22.39■■□□□ 1.17
TNFAIP2-206ENST00000560428 SPDYE2Q495Y8 402 aa22.39■■□□□ 1.17
TNFAIP2-206ENST00000560428 VEZTQ9HBM0 779 aa22.39■■□□□ 1.17
TNFAIP2-206ENST00000560428 TSKSQ9UJT2 592 aa22.39■■□□□ 1.17
TNFAIP2-206ENST00000560428 AKAP11Q9UKA4 1901 aa22.39■■□□□ 1.17
TNFAIP2-206ENST00000560428 SSC5DA1L4H1 1573 aa22.38■■□□□ 1.17
TNFAIP2-206ENST00000560428 MAST3O60307 1309 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms