RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ZIC5Q96T25 663 aa15.68■□□□□ 0.1
SMAD3-208ENST00000558827 TSKSQ9UJT2 592 aa15.68■□□□□ 0.1
SMAD3-208ENST00000558827 PA2G4Q9UQ80 394 aaKnown RBP15.68■□□□□ 0.1
SMAD3-208ENST00000558827 MROH5Q6ZUA9 1318 aa15.68■□□□□ 0.1
SMAD3-208ENST00000558827 PRKG1Q13976 671 aa15.67■□□□□ 0.1
SMAD3-208ENST00000558827 C2orf69Q8N8R5 385 aa15.67■□□□□ 0.1
SMAD3-208ENST00000558827 WBP1LQ9NX94 342 aa15.67■□□□□ 0.1
SMAD3-208ENST00000558827 HDAC9Q9UKV0 1011 aa15.67■□□□□ 0.1
SMAD3-208ENST00000558827 AOX1Q06278 1338 aa15.67■□□□□ 0.1
SMAD3-208ENST00000558827 MYO3BQ8WXR4 1341 aa15.67■□□□□ 0.1
SMAD3-208ENST00000558827 BCAMP50895 628 aa15.66■□□□□ 0.1
SMAD3-208ENST00000558827 RBM5P52756 815 aaKnown RBP eCLIP15.66■□□□□ 0.1
SMAD3-208ENST00000558827 BRPF1P55201 1214 aaPredicted RBP15.66■□□□□ 0.1
SMAD3-208ENST00000558827 PTPN12Q05209 780 aaKnown RBP15.66■□□□□ 0.1
SMAD3-208ENST00000558827 GRIK5Q16478 980 aa15.66■□□□□ 0.1
SMAD3-208ENST00000558827 VPS37DQ86XT2 251 aa15.66■□□□□ 0.1
SMAD3-208ENST00000558827 TDRD7Q8NHU6 1098 aaKnown RBP15.66■□□□□ 0.1
SMAD3-208ENST00000558827 CLRN2A0PK11 232 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 UBE2Q2LH0YL09 131 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 EYA2O00167 538 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 FRAT2O75474 233 aaPredicted RBP15.65■□□□□ 0.1
SMAD3-208ENST00000558827 CAPN15O75808 1086 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 PDE8BO95263 885 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 TRIM27P14373 513 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 LBX1P52954 281 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 DLGAP5Q15398 846 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 CFAP100Q494V2 611 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 VGLL2Q8N8G2 317 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 ZNF609O15014 1411 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 KIF16BQ96L93 1317 aa15.65■□□□□ 0.1
SMAD3-208ENST00000558827 ZNF157P51786 506 aaPredicted RBP15.64■□□□□ 0.09
SMAD3-208ENST00000558827 TTLL12Q14166 644 aaPredicted RBP15.64■□□□□ 0.09
SMAD3-208ENST00000558827 MFSD14BQ5SR56 506 aa15.64■□□□□ 0.09
SMAD3-208ENST00000558827 IFFO2Q5TF58 517 aa15.64■□□□□ 0.09
SMAD3-208ENST00000558827 RGMBQ6NW40 437 aa15.64■□□□□ 0.09
SMAD3-208ENST00000558827 ATG9AQ7Z3C6 839 aa15.64■□□□□ 0.09
SMAD3-208ENST00000558827 FBXO33Q7Z6M2 555 aa15.64■□□□□ 0.09
SMAD3-208ENST00000558827 FZD1Q9UP38 647 aa15.64■□□□□ 0.09
SMAD3-208ENST00000558827 IPO8O15397 1037 aaKnown RBP15.63■□□□□ 0.09
SMAD3-208ENST00000558827 CTCFP49711 727 aaPredicted RBP15.63■□□□□ 0.09
SMAD3-208ENST00000558827 MAP2K1Q02750 393 aaPredicted RBP15.63■□□□□ 0.09
SMAD3-208ENST00000558827 INTS3Q68E01 1043 aaKnown RBP15.63■□□□□ 0.09
SMAD3-208ENST00000558827 ATF7IPQ6VMQ6 1270 aa15.63■□□□□ 0.09
SMAD3-208ENST00000558827 TNS4Q8IZW8 715 aa15.63■□□□□ 0.09
SMAD3-208ENST00000558827 ARHGAP45Q92619 1136 aa15.63■□□□□ 0.09
SMAD3-208ENST00000558827 PRMT6Q96LA8 375 aaPredicted RBP15.63■□□□□ 0.09
SMAD3-208ENST00000558827 VEZTQ9HBM0 779 aa15.63■□□□□ 0.09
SMAD3-208ENST00000558827 TTF2Q9UNY4 1162 aaKnown RBP15.63■□□□□ 0.09
SMAD3-208ENST00000558827 HSPA8P11142 646 aaKnown RBP15.62■□□□□ 0.09
SMAD3-208ENST00000558827 CAVIN4Q5BKX8 364 aa15.62■□□□□ 0.09
SMAD3-208ENST00000558827 TMEM57Q8N5G2 664 aa15.62■□□□□ 0.09
SMAD3-208ENST00000558827 ZBED3Q96IU2 234 aaPredicted RBP15.62■□□□□ 0.09
SMAD3-208ENST00000558827 FAM205AQ6ZU69 1335 aa15.62■□□□□ 0.09
SMAD3-208ENST00000558827 IFIT1P09914 478 aaKnown RBP15.61■□□□□ 0.09
SMAD3-208ENST00000558827 FGFR2P21802 821 aa15.61■□□□□ 0.09
SMAD3-208ENST00000558827 PUM3Q15397 648 aaKnown RBP15.61■□□□□ 0.09
SMAD3-208ENST00000558827 ZKSCAN2Q63HK3 967 aa15.61■□□□□ 0.09
SMAD3-208ENST00000558827 BEGAINQ9BUH8 593 aa15.61■□□□□ 0.09
SMAD3-208ENST00000558827 PITPNM2Q9BZ72 1349 aa15.61■□□□□ 0.09
SMAD3-208ENST00000558827 SLC5A1P13866 664 aa15.6■□□□□ 0.09
SMAD3-208ENST00000558827 MAP2K2P36507 400 aa15.6■□□□□ 0.09
SMAD3-208ENST00000558827 KIF23Q02241 960 aaPredicted RBP15.6■□□□□ 0.09
SMAD3-208ENST00000558827 MKRN3Q13064 507 aaKnown RBP15.6■□□□□ 0.09
SMAD3-208ENST00000558827 C1orf115Q9H7X2 142 aa15.6■□□□□ 0.09
SMAD3-208ENST00000558827 CEP126Q9P2H0 1117 aa15.6■□□□□ 0.09
SMAD3-208ENST00000558827 SPDYE2BA6NHP3 402 aa15.59■□□□□ 0.09
SMAD3-208ENST00000558827 FAM155AB1AL88 458 aaPredicted RBP15.59■□□□□ 0.09
SMAD3-208ENST00000558827 SRGAP3O43295 1099 aa15.59■□□□□ 0.09
SMAD3-208ENST00000558827 GNAI3P08754 354 aa15.59■□□□□ 0.09
SMAD3-208ENST00000558827 SPDYE6P0CI01 402 aa15.59■□□□□ 0.09
SMAD3-208ENST00000558827 ADORA1P30542 326 aa15.59■□□□□ 0.09
SMAD3-208ENST00000558827 FKBP1AP62942 108 aaKnown RBP15.59■□□□□ 0.09
SMAD3-208ENST00000558827 ATP2B3Q16720 1220 aa15.59■□□□□ 0.09
SMAD3-208ENST00000558827 APOBEC3FQ8IUX4 373 aaKnown RBP15.59■□□□□ 0.09
SMAD3-208ENST00000558827 HHIPL1Q96JK4 782 aa15.59■□□□□ 0.09
SMAD3-208ENST00000558827 DEFB129Q9H1M3 183 aa15.59■□□□□ 0.09
SMAD3-208ENST00000558827 TDRD3Q9H7E2 651 aaKnown RBP15.59■□□□□ 0.09
SMAD3-208ENST00000558827 TIMM10P62072 90 aa15.58■□□□□ 0.08
SMAD3-208ENST00000558827 LPIN2Q92539 896 aa15.58■□□□□ 0.08
SMAD3-208ENST00000558827 HDAC5Q9UQL6 1122 aa15.58■□□□□ 0.08
SMAD3-208ENST00000558827 TCP10L2B9ZVM9 353 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 MYO1BO43795 1136 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 GNAI2P04899 355 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 RLBP1P12271 317 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 NF2P35240 595 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 CRKP46108 304 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 CACNB3P54284 484 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 NOGQ13253 232 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 MTMR14Q8NCE2 650 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 CCDC102AQ96A19 550 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 ZNF70Q9UC06 446 aaPredicted RBP15.57■□□□□ 0.08
SMAD3-208ENST00000558827 ANGEL1Q9UNK9 670 aaKnown RBP15.57■□□□□ 0.08
SMAD3-208ENST00000558827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.57■□□□□ 0.08
SMAD3-208ENST00000558827 ZBED9Q6R2W3 1325 aa15.57■□□□□ 0.08
SMAD3-208ENST00000558827 PNMA6EA0A0J9YXQ4 647 aa15.56■□□□□ 0.08
SMAD3-208ENST00000558827 CIAO1O76071 339 aa15.56■□□□□ 0.08
SMAD3-208ENST00000558827 SLC10A3P09131 477 aa15.56■□□□□ 0.08
SMAD3-208ENST00000558827 IL15P40933 162 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-208ENST00000558827 PHKA1P46020 1223 aa15.56■□□□□ 0.08
SMAD3-208ENST00000558827 TFCP2Q12800 502 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms