RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 RASAL3Q86YV0 1011 aa17.85■□□□□ 0.45
SNX6-210ENST00000557341 CERS5Q8N5B7 392 aa17.85■□□□□ 0.45
SNX6-210ENST00000557341 BICC1Q9H694 974 aaKnown RBP17.85■□□□□ 0.45
SNX6-210ENST00000557341 SAGE1Q9NXZ1 904 aa17.85■□□□□ 0.45
SNX6-210ENST00000557341 MROH5Q6ZUA9 1318 aa17.84■□□□□ 0.45
SNX6-210ENST00000557341 UBE4AQ14139 1066 aa17.84■□□□□ 0.45
SNX6-210ENST00000557341 DLGAP5Q15398 846 aa17.84■□□□□ 0.45
SNX6-210ENST00000557341 ALDH1L2Q3SY69 923 aa17.84■□□□□ 0.45
SNX6-210ENST00000557341 RABL6Q3YEC7 729 aaPredicted RBP17.84■□□□□ 0.45
SNX6-210ENST00000557341 PRAMEF18Q5VWM3 479 aa17.84■□□□□ 0.45
SNX6-210ENST00000557341 ABHD8Q96I13 439 aa17.84■□□□□ 0.45
SNX6-210ENST00000557341 ZBED3Q96IU2 234 aaPredicted RBP17.84■□□□□ 0.45
SNX6-210ENST00000557341 TTLL12Q14166 644 aaPredicted RBP17.83■□□□□ 0.44
SNX6-210ENST00000557341 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
SNX6-210ENST00000557341 MOB2Q70IA6 237 aa17.82■□□□□ 0.44
SNX6-210ENST00000557341 REM2Q8IYK8 340 aaPredicted RBP17.82■□□□□ 0.44
SNX6-210ENST00000557341 ANKRD44Q8N8A2 993 aa17.82■□□□□ 0.44
SNX6-210ENST00000557341 MTMR14Q8NCE2 650 aa17.82■□□□□ 0.44
SNX6-210ENST00000557341 CDCA7LQ96GN5 454 aa17.82■□□□□ 0.44
SNX6-210ENST00000557341 PUS3Q9BZE2 481 aaKnown RBP17.82■□□□□ 0.44
SNX6-210ENST00000557341 FAM205AQ6ZU69 1335 aa17.81■□□□□ 0.44
SNX6-210ENST00000557341 F8W031 263 aaPredicted RBP17.81■□□□□ 0.44
SNX6-210ENST00000557341 MYO1BO43795 1136 aa17.81■□□□□ 0.44
SNX6-210ENST00000557341 JAG2Q9Y219 1238 aa17.81■□□□□ 0.44
SNX6-210ENST00000557341 RIPOR2Q9Y4F9 1068 aa17.81■□□□□ 0.44
SNX6-210ENST00000557341 SSC5DA1L4H1 1573 aa17.8■□□□□ 0.44
SNX6-210ENST00000557341 UBE2Q2LH0YL09 131 aa17.8■□□□□ 0.44
SNX6-210ENST00000557341 CCER2I3L3R5 266 aa17.8■□□□□ 0.44
SNX6-210ENST00000557341 HIBADHP31937 336 aaKnown RBP17.8■□□□□ 0.44
SNX6-210ENST00000557341 GYG1P46976 350 aa17.8■□□□□ 0.44
SNX6-210ENST00000557341 CFAP100Q494V2 611 aa17.8■□□□□ 0.44
SNX6-210ENST00000557341 SPDYE2BA6NHP3 402 aa17.79■□□□□ 0.44
SNX6-210ENST00000557341 CT47B1P0C2W7 299 aaPredicted RBP17.79■□□□□ 0.44
SNX6-210ENST00000557341 SPDYE6P0CI01 402 aa17.79■□□□□ 0.44
SNX6-210ENST00000557341 METTL24Q5JXM2 366 aa17.79■□□□□ 0.44
SNX6-210ENST00000557341 MFSD14BQ5SR56 506 aa17.79■□□□□ 0.44
SNX6-210ENST00000557341 ARMC9Q7Z3E5 817 aa17.79■□□□□ 0.44
SNX6-210ENST00000557341 TRMT2AQ8IZ69 625 aaKnown RBP17.79■□□□□ 0.44
SNX6-210ENST00000557341 TDRD7Q8NHU6 1098 aaKnown RBP17.79■□□□□ 0.44
SNX6-210ENST00000557341 CSRNP1Q96S65 589 aa17.79■□□□□ 0.44
SNX6-210ENST00000557341 USP44Q9H0E7 712 aa17.79■□□□□ 0.44
SNX6-210ENST00000557341 RNF186Q9NXI6 227 aa17.79■□□□□ 0.44
SNX6-210ENST00000557341 PPP2R3BQ9Y5P8 575 aa17.79■□□□□ 0.44
SNX6-210ENST00000557341 TRPA1O75762 1119 aa17.78■□□□□ 0.44
SNX6-210ENST00000557341 LRRC24Q50LG9 513 aa17.78■□□□□ 0.44
SNX6-210ENST00000557341 VPS37DQ86XT2 251 aa17.78■□□□□ 0.44
SNX6-210ENST00000557341 FAM84BQ96KN1 310 aaPredicted RBP17.78■□□□□ 0.44
SNX6-210ENST00000557341 DEFB129Q9H1M3 183 aa17.78■□□□□ 0.44
SNX6-210ENST00000557341 PCDHAC2Q9Y5I4 1007 aa17.78■□□□□ 0.44
SNX6-210ENST00000557341 CLRN2A0PK11 232 aa17.77■□□□□ 0.44
SNX6-210ENST00000557341 RBM5P52756 815 aaKnown RBP eCLIP17.77■□□□□ 0.44
SNX6-210ENST00000557341 VGLL2Q8N8G2 317 aa17.77■□□□□ 0.44
SNX6-210ENST00000557341 MCOLN1Q9GZU1 580 aa17.77■□□□□ 0.44
SNX6-210ENST00000557341 PDE8BO95263 885 aa17.76■□□□□ 0.43
SNX6-210ENST00000557341 DGKZQ13574 1117 aa17.76■□□□□ 0.43
SNX6-210ENST00000557341 PRKG1Q13976 671 aa17.76■□□□□ 0.43
SNX6-210ENST00000557341 CAVIN4Q5BKX8 364 aa17.76■□□□□ 0.43
SNX6-210ENST00000557341 KLHDC4Q8TBB5 520 aa17.76■□□□□ 0.43
SNX6-210ENST00000557341 PRMT6Q96LA8 375 aaPredicted RBP17.76■□□□□ 0.43
SNX6-210ENST00000557341 VEZTQ9HBM0 779 aa17.76■□□□□ 0.43
SNX6-210ENST00000557341 ANGEL1Q9UNK9 670 aaKnown RBP17.76■□□□□ 0.43
SNX6-210ENST00000557341 TTF2Q9UNY4 1162 aaKnown RBP17.76■□□□□ 0.43
SNX6-210ENST00000557341 SERPINA10Q9UK55 444 aa17.75■□□□□ 0.43
SNX6-210ENST00000557341 KIF16BQ96L93 1317 aa17.74■□□□□ 0.43
SNX6-210ENST00000557341 AK9Q5TCS8 1911 aa17.74■□□□□ 0.43
SNX6-210ENST00000557341 CCDC85CA6NKD9 419 aa17.74■□□□□ 0.43
SNX6-210ENST00000557341 PPP1R12BO60237 982 aaPredicted RBP17.74■□□□□ 0.43
SNX6-210ENST00000557341 FRAT2O75474 233 aaPredicted RBP17.74■□□□□ 0.43
SNX6-210ENST00000557341 UBTFL1P0CB47 393 aaPredicted RBP17.74■□□□□ 0.43
SNX6-210ENST00000557341 PTPN12Q05209 780 aaKnown RBP17.74■□□□□ 0.43
SNX6-210ENST00000557341 TNFAIP1Q13829 316 aa17.74■□□□□ 0.43
SNX6-210ENST00000557341 PUM3Q15397 648 aaKnown RBP17.74■□□□□ 0.43
SNX6-210ENST00000557341 AOX1Q06278 1338 aa17.73■□□□□ 0.43
SNX6-210ENST00000557341 SREBF2Q12772 1141 aa17.73■□□□□ 0.43
SNX6-210ENST00000557341 MKRN3Q13064 507 aaKnown RBP17.73■□□□□ 0.43
SNX6-210ENST00000557341 MAP3K11Q16584 847 aa17.73■□□□□ 0.43
SNX6-210ENST00000557341 LDLRAD1Q5T700 205 aa17.73■□□□□ 0.43
SNX6-210ENST00000557341 FBXO33Q7Z6M2 555 aa17.73■□□□□ 0.43
SNX6-210ENST00000557341 TBC1D22AQ8WUA7 517 aa17.73■□□□□ 0.43
SNX6-210ENST00000557341 API5Q9BZZ5 524 aaKnown RBP17.73■□□□□ 0.43
SNX6-210ENST00000557341 NOB1Q9ULX3 412 aaKnown RBP17.73■□□□□ 0.43
SNX6-210ENST00000557341 IQSEC3Q9UPP2 1182 aaPredicted RBP17.73■□□□□ 0.43
SNX6-210ENST00000557341 MYH2Q9UKX2 1941 aa17.72■□□□□ 0.43
SNX6-210ENST00000557341 EYA2O00167 538 aa17.72■□□□□ 0.43
SNX6-210ENST00000557341 IFIT1P09914 478 aaKnown RBP17.72■□□□□ 0.43
SNX6-210ENST00000557341 CRKP46108 304 aa17.72■□□□□ 0.43
SNX6-210ENST00000557341 RFX5P48382 616 aaPredicted RBP17.72■□□□□ 0.43
SNX6-210ENST00000557341 CHAF1AQ13111 956 aaPredicted RBP17.72■□□□□ 0.43
SNX6-210ENST00000557341 SUPT20HL1Q3ZLR7 823 aa17.72■□□□□ 0.43
SNX6-210ENST00000557341 SPDYE2Q495Y8 402 aa17.72■□□□□ 0.43
SNX6-210ENST00000557341 FZD1Q9UP38 647 aa17.72■□□□□ 0.43
SNX6-210ENST00000557341 DOCK2Q92608 1830 aa17.71■□□□□ 0.43
SNX6-210ENST00000557341 TM4SF4P48230 202 aa17.71■□□□□ 0.43
SNX6-210ENST00000557341 RASA3Q14644 834 aa17.71■□□□□ 0.43
SNX6-210ENST00000557341 ZNF70Q9UC06 446 aaPredicted RBP17.71■□□□□ 0.43
SNX6-210ENST00000557341 HDAC5Q9UQL6 1122 aa17.71■□□□□ 0.43
SNX6-210ENST00000557341 SLC5A1P13866 664 aa17.7■□□□□ 0.42
SNX6-210ENST00000557341 FGFR2P21802 821 aa17.7■□□□□ 0.42
SNX6-210ENST00000557341 NBPF12Q5TAG4 269 aaPredicted RBP17.7■□□□□ 0.42
SNX6-210ENST00000557341 SPRYD7Q5W111 196 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms