RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, human

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-206	ENST00000556809	CST9	Q5W186	159 aa		27.95	■■■□□ 2.06
PABPN1-206	ENST00000556809	ZBTB40	Q9NUA8	1239 aa		27.95	■■■□□ 2.06
PABPN1-206	ENST00000556809	ASTN2	O75129	1339 aa	Predicted RBP	27.94	■■■□□ 2.06
PABPN1-206	ENST00000556809	FAM205A	Q6ZU69	1335 aa		27.94	■■■□□ 2.06
PABPN1-206	ENST00000556809	SCARF1	Q14162	830 aa		27.94	■■■□□ 2.06
PABPN1-206	ENST00000556809	PNMA6E	A0A0J9YXQ4	647 aa		27.93	■■■□□ 2.06
PABPN1-206	ENST00000556809	IL15	P40933	162 aa	Predicted RBP	27.93	■■■□□ 2.06
PABPN1-206	ENST00000556809	USP48	Q86UV5	1035 aa		27.93	■■■□□ 2.06
PABPN1-206	ENST00000556809	KIAA0825	Q8IV33	1275 aa		27.93	■■■□□ 2.06
PABPN1-206	ENST00000556809	OGFOD1	Q8N543	542 aa		27.93	■■■□□ 2.06
PABPN1-206	ENST00000556809	JMY	Q8N9B5	988 aa		27.93	■■■□□ 2.06
PABPN1-206	ENST00000556809	SUPT16H	Q9Y5B9	1047 aa	Known RBP	27.93	■■■□□ 2.06
PABPN1-206	ENST00000556809	ATP8B2	P98198	1209 aa		27.91	■■■□□ 2.06
PABPN1-206	ENST00000556809	DLK2	Q6UY11	383 aa		27.91	■■■□□ 2.06
PABPN1-206	ENST00000556809	LPIN2	Q92539	896 aa		27.91	■■■□□ 2.06
PABPN1-206	ENST00000556809	DCPS	Q96C86	337 aa	Known RBP	27.91	■■■□□ 2.06
PABPN1-206	ENST00000556809	ZBED3	Q96IU2	234 aa	Predicted RBP	27.91	■■■□□ 2.06
PABPN1-206	ENST00000556809	GGA3	Q9NZ52	723 aa		27.91	■■■□□ 2.06
PABPN1-206	ENST00000556809	JAG2	Q9Y219	1238 aa		27.91	■■■□□ 2.06
PABPN1-206	ENST00000556809	ARAP2	Q8WZ64	1704 aa		27.91	■■■□□ 2.06
PABPN1-206	ENST00000556809	CNTNAP1	P78357	1384 aa		27.9	■■■□□ 2.06
PABPN1-206	ENST00000556809	IFIT1	P09914	478 aa	Known RBP	27.9	■■■□□ 2.06
PABPN1-206	ENST00000556809	NBPF9	Q3BBW0	867 aa		27.9	■■■□□ 2.06
PABPN1-206	ENST00000556809	CAVIN4	Q5BKX8	364 aa		27.9	■■■□□ 2.06
PABPN1-206	ENST00000556809	CEP85	Q6P2H3	762 aa		27.9	■■■□□ 2.06
PABPN1-206	ENST00000556809	KRT26	Q7Z3Y9	468 aa		27.9	■■■□□ 2.06
PABPN1-206	ENST00000556809	CEP126	Q9P2H0	1117 aa		27.9	■■■□□ 2.06
PABPN1-206	ENST00000556809	WNT10B	O00744	389 aa		27.89	■■■□□ 2.06
PABPN1-206	ENST00000556809	BCAM	P50895	628 aa		27.89	■■■□□ 2.06
PABPN1-206	ENST00000556809	ANGEL2	Q5VTE6	544 aa	Known RBP	27.89	■■■□□ 2.06
PABPN1-206	ENST00000556809	MKRN1	Q9UHC7	482 aa	Known RBP	27.89	■■■□□ 2.06
PABPN1-206	ENST00000556809	RASSF10	A6NK89	507 aa		27.88	■■■□□ 2.05
PABPN1-206	ENST00000556809	POLA2	Q14181	598 aa		27.88	■■■□□ 2.05
PABPN1-206	ENST00000556809	VPS37D	Q86XT2	251 aa		27.88	■■■□□ 2.05
PABPN1-206	ENST00000556809	SSH3	Q8TE77	659 aa		27.88	■■■□□ 2.05
PABPN1-206	ENST00000556809	HDAC9	Q9UKV0	1011 aa		27.88	■■■□□ 2.05
PABPN1-206	ENST00000556809	PITPNM2	Q9BZ72	1349 aa		27.88	■■■□□ 2.05
PABPN1-206	ENST00000556809	ADM5	C9JUS6	153 aa		27.87	■■■□□ 2.05
PABPN1-206	ENST00000556809	CELF2	O95319	508 aa	Known RBP	27.87	■■■□□ 2.05
PABPN1-206	ENST00000556809	SLC5A1	P13866	664 aa		27.87	■■■□□ 2.05
PABPN1-206	ENST00000556809	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	27.87	■■■□□ 2.05
PABPN1-206	ENST00000556809	ATP2B3	Q16720	1220 aa		27.86	■■■□□ 2.05
PABPN1-206	ENST00000556809	MFSD14B	Q5SR56	506 aa		27.86	■■■□□ 2.05
PABPN1-206	ENST00000556809	MTMR14	Q8NCE2	650 aa		27.86	■■■□□ 2.05
PABPN1-206	ENST00000556809	CRBN	Q96SW2	442 aa		27.86	■■■□□ 2.05
PABPN1-206	ENST00000556809	SULF1	Q8IWU6	871 aa		27.85	■■■□□ 2.05
PABPN1-206	ENST00000556809	TLL2	Q9Y6L7	1015 aa		27.85	■■■□□ 2.05
PABPN1-206	ENST00000556809	MYH13	Q9UKX3	1938 aa		27.84	■■■□□ 2.05
PABPN1-206	ENST00000556809	ECM29	Q5VYK3	1845 aa		27.84	■■■□□ 2.05
PABPN1-206	ENST00000556809	RPAP2	Q8IXW5	612 aa	Predicted RBP	27.84	■■■□□ 2.05
PABPN1-206	ENST00000556809	ABT1	Q9ULW3	272 aa	Known RBP	27.84	■■■□□ 2.05
PABPN1-206	ENST00000556809	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	27.84	■■■□□ 2.05
PABPN1-206	ENST00000556809		F8W031	263 aa	Predicted RBP	27.83	■■■□□ 2.05
PABPN1-206	ENST00000556809	DEFB115	Q30KQ5	88 aa		27.83	■■■□□ 2.05
PABPN1-206	ENST00000556809	VEGFB	P49765	207 aa		27.82	■■■□□ 2.04
PABPN1-206	ENST00000556809	TFCP2	Q12800	502 aa		27.82	■■■□□ 2.04
PABPN1-206	ENST00000556809	SAPCD2	Q86UD0	394 aa		27.82	■■■□□ 2.04
PABPN1-206	ENST00000556809	PCDHAC2	Q9Y5I4	1007 aa		27.82	■■■□□ 2.04
PABPN1-206	ENST00000556809	ZBTB22	O15209	634 aa		27.81	■■■□□ 2.04
PABPN1-206	ENST00000556809	GRIK5	Q16478	980 aa		27.81	■■■□□ 2.04
PABPN1-206	ENST00000556809	ZNF408	Q9H9D4	720 aa		27.81	■■■□□ 2.04
PABPN1-206	ENST00000556809	CHAF1A	Q13111	956 aa	Predicted RBP	27.8	■■■□□ 2.04
PABPN1-206	ENST00000556809	DLGAP5	Q15398	846 aa		27.8	■■■□□ 2.04
PABPN1-206	ENST00000556809	CFAP100	Q494V2	611 aa		27.8	■■■□□ 2.04
PABPN1-206	ENST00000556809	TBC1D22A	Q8WUA7	517 aa		27.8	■■■□□ 2.04
PABPN1-206	ENST00000556809	CDCA5	Q96FF9	252 aa		27.8	■■■□□ 2.04
PABPN1-206	ENST00000556809	SCAF8	Q9UPN6	1271 aa	Known RBP	27.8	■■■□□ 2.04
PABPN1-206	ENST00000556809	COL1A1	P02452	1464 aa	Predicted RBP	27.8	■■■□□ 2.04
PABPN1-206	ENST00000556809	FRAT2	O75474	233 aa	Predicted RBP	27.79	■■■□□ 2.04
PABPN1-206	ENST00000556809	ADORA1	P30542	326 aa		27.79	■■■□□ 2.04
PABPN1-206	ENST00000556809	TIMM10	P62072	90 aa		27.79	■■■□□ 2.04
PABPN1-206	ENST00000556809	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.79	■■■□□ 2.04
PABPN1-206	ENST00000556809	SIRT2	Q8IXJ6	389 aa		27.79	■■■□□ 2.04
PABPN1-206	ENST00000556809	PRMT6	Q96LA8	375 aa	Predicted RBP	27.79	■■■□□ 2.04
PABPN1-206	ENST00000556809	TTF2	Q9UNY4	1162 aa	Known RBP	27.79	■■■□□ 2.04
PABPN1-206	ENST00000556809	PCNT	O95613	3336 aa		27.79	■■■□□ 2.04
PABPN1-206	ENST00000556809	SPDYE2B	A6NHP3	402 aa		27.78	■■■□□ 2.04
PABPN1-206	ENST00000556809	HMMR	O75330	724 aa		27.78	■■■□□ 2.04
PABPN1-206	ENST00000556809	SURF6	O75683	361 aa	Known RBP	27.78	■■■□□ 2.04
PABPN1-206	ENST00000556809	SPDYE6	P0CI01	402 aa		27.78	■■■□□ 2.04
PABPN1-206	ENST00000556809	SERPINA10	Q9UK55	444 aa		27.78	■■■□□ 2.04
PABPN1-206	ENST00000556809	AOX1	Q06278	1338 aa		27.77	■■■□□ 2.04
PABPN1-206	ENST00000556809		A0A1B0GUL7	405 aa		27.77	■■■□□ 2.04
PABPN1-206	ENST00000556809	PHKA1	P46020	1223 aa		27.77	■■■□□ 2.04
PABPN1-206	ENST00000556809	HHIPL1	Q96JK4	782 aa		27.77	■■■□□ 2.04
PABPN1-206	ENST00000556809	AKAP2	Q9Y2D5	859 aa		27.77	■■■□□ 2.04
PABPN1-206	ENST00000556809	NOP58	Q9Y2X3	529 aa	Known RBP	27.77	■■■□□ 2.04
PABPN1-206	ENST00000556809	GBA2	Q9HCG7	927 aa	Predicted RBP	27.76	■■■□□ 2.03
PABPN1-206	ENST00000556809	WDR33	Q9C0J8	1336 aa	Known RBP	27.75	■■■□□ 2.03
PABPN1-206	ENST00000556809	OS9	Q13438	667 aa	Predicted RBP	27.75	■■■□□ 2.03
PABPN1-206	ENST00000556809	CCDC102B	Q68D86	513 aa		27.75	■■■□□ 2.03
PABPN1-206	ENST00000556809	APOBEC3F	Q8IUX4	373 aa	Known RBP	27.75	■■■□□ 2.03
PABPN1-206	ENST00000556809	XAGE2	Q96GT9	111 aa		27.75	■■■□□ 2.03
PABPN1-206	ENST00000556809	GNL3L	Q9NVN8	582 aa	Known RBP	27.75	■■■□□ 2.03
PABPN1-206	ENST00000556809	SUGT1	Q9Y2Z0	365 aa		27.75	■■■□□ 2.03
PABPN1-206	ENST00000556809	THSD7B	Q9C0I4	1608 aa		27.74	■■■□□ 2.03
PABPN1-206	ENST00000556809	HDLBP	Q00341	1268 aa	Known RBP	27.74	■■■□□ 2.03
PABPN1-206	ENST00000556809	WDR66	Q8TBY9	1149 aa		27.74	■■■□□ 2.03
PABPN1-206	ENST00000556809	SEMA3E	O15041	775 aa		27.73	■■■□□ 2.03
PABPN1-206	ENST00000556809	CYP4F22	Q6NT55	531 aa		27.73	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms