RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 METTL24Q5JXM2 366 aa12.54□□□□□ -0.4
HNRNPC-219ENST00000555309 VGLL2Q8N8G2 317 aa12.54□□□□□ -0.4
HNRNPC-219ENST00000555309 SIL1Q9H173 461 aa12.54□□□□□ -0.4
HNRNPC-219ENST00000555309 TRPM7Q96QT4 1865 aa12.53□□□□□ -0.4
HNRNPC-219ENST00000555309 GRIK5Q16478 980 aa12.53□□□□□ -0.4
HNRNPC-219ENST00000555309 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-219ENST00000555309 PAXIP1Q6ZW49 1069 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-219ENST00000555309 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
HNRNPC-219ENST00000555309 ARHGAP45Q92619 1136 aa12.53□□□□□ -0.4
HNRNPC-219ENST00000555309 DCPSQ96C86 337 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-219ENST00000555309 RBM19Q9Y4C8 960 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-219ENST00000555309 TLL2Q9Y6L7 1015 aa12.53□□□□□ -0.4
HNRNPC-219ENST00000555309 ZNF609O15014 1411 aa12.53□□□□□ -0.4
HNRNPC-219ENST00000555309 WNT10BO00744 389 aa12.52□□□□□ -0.41
HNRNPC-219ENST00000555309 AOC2O75106 756 aa12.52□□□□□ -0.41
HNRNPC-219ENST00000555309 MS4A1P11836 297 aa12.52□□□□□ -0.41
HNRNPC-219ENST00000555309 ATF7IPQ6VMQ6 1270 aa12.52□□□□□ -0.41
HNRNPC-219ENST00000555309 CENPQQ7L2Z9 268 aaPredicted RBP12.52□□□□□ -0.41
HNRNPC-219ENST00000555309 ZNF804AQ7Z570 1209 aa12.52□□□□□ -0.41
HNRNPC-219ENST00000555309 SAPCD2Q86UD0 394 aa12.52□□□□□ -0.41
HNRNPC-219ENST00000555309 KIF16BQ96L93 1317 aa12.52□□□□□ -0.41
HNRNPC-219ENST00000555309 WDR33Q9C0J8 1336 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-219ENST00000555309 EYA2O00167 538 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 PDE8BO95263 885 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 BCAMP50895 628 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 UBE4AQ14139 1066 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 COL13A1Q5TAT6 717 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 TMEM57Q8N5G2 664 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 TDRD7Q8NHU6 1098 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 ZIC5Q96T25 663 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 MROH5Q6ZUA9 1318 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 RLBP1P12271 317 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 HIBADHP31937 336 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 MOB2Q70IA6 237 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 CDCA5Q96FF9 252 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 CAPNS2Q96L46 248 aa12.51□□□□□ -0.41
HNRNPC-219ENST00000555309 FGFR2P21802 821 aa12.5□□□□□ -0.41
HNRNPC-219ENST00000555309 FBXO33Q7Z6M2 555 aa12.5□□□□□ -0.41
HNRNPC-219ENST00000555309 SULF1Q8IWU6 871 aa12.5□□□□□ -0.41
HNRNPC-219ENST00000555309 ZBED3Q96IU2 234 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-219ENST00000555309 FOXN1O15353 648 aa12.49□□□□□ -0.41
HNRNPC-219ENST00000555309 CHAF1AQ13111 956 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-219ENST00000555309 OGFOD1Q8N543 542 aa12.49□□□□□ -0.41
HNRNPC-219ENST00000555309 FZD1Q9UP38 647 aa12.49□□□□□ -0.41
HNRNPC-219ENST00000555309 IPO8O15397 1037 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 HUNKP57058 714 aa12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 ZKSCAN2Q63HK3 967 aa12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 PRMT6Q96LA8 375 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 GBA2Q9HCG7 927 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 FAM205AQ6ZU69 1335 aa12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 MYO3BQ8WXR4 1341 aa12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 CLRN2A0PK11 232 aa12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 MFSD14BQ5SR56 506 aa12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 C1orf115Q9H7X2 142 aa12.48□□□□□ -0.41
HNRNPC-219ENST00000555309 SRGAP3O43295 1099 aa12.47□□□□□ -0.41
HNRNPC-219ENST00000555309 ADORA1P30542 326 aa12.47□□□□□ -0.41
HNRNPC-219ENST00000555309 CFAP100Q494V2 611 aa12.47□□□□□ -0.41
HNRNPC-219ENST00000555309 WBP1LQ9NX94 342 aa12.47□□□□□ -0.41
HNRNPC-219ENST00000555309 GNAI3P08754 354 aa12.46□□□□□ -0.41
HNRNPC-219ENST00000555309 PRKG1Q13976 671 aa12.46□□□□□ -0.41
HNRNPC-219ENST00000555309 PUM3Q15397 648 aaKnown RBP12.46□□□□□ -0.41
HNRNPC-219ENST00000555309 DLGAP5Q15398 846 aa12.46□□□□□ -0.41
HNRNPC-219ENST00000555309 VPS37DQ86XT2 251 aa12.46□□□□□ -0.41
HNRNPC-219ENST00000555309 PANK1Q8TE04 598 aa12.46□□□□□ -0.41
HNRNPC-219ENST00000555309 TSKSQ9UJT2 592 aa12.46□□□□□ -0.41
HNRNPC-219ENST00000555309 TIMM10P62072 90 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 COPRSQ9NQ92 184 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 HDAC9Q9UKV0 1011 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 TTF2Q9UNY4 1162 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 FAM155AB1AL88 458 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 UBE2Q2LH0YL09 131 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 CIAO1O76071 339 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 GNAI2P04899 355 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 RBM5P52756 815 aaKnown RBP eCLIP12.45□□□□□ -0.425e-14■■□□□ 12.8
HNRNPC-219ENST00000555309 FKBP1AP62942 108 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 TFCP2Q12800 502 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 MVPQ14764 893 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 ATP2B3Q16720 1220 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 CAVIN4Q5BKX8 364 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 C2orf69Q8N8R5 385 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 LPIN2Q92539 896 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 CEP126Q9P2H0 1117 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 PITPNM2Q9BZ72 1349 aa12.45□□□□□ -0.42
HNRNPC-219ENST00000555309 FRAT2O75474 233 aaPredicted RBP12.44□□□□□ -0.42
HNRNPC-219ENST00000555309 IFIT1P09914 478 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-219ENST00000555309 MTX1Q13505 466 aa12.44□□□□□ -0.42
HNRNPC-219ENST00000555309 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
HNRNPC-219ENST00000555309 DZIP1LQ8IYY4 767 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-219ENST00000555309 COG6Q9Y2V7 657 aa12.44□□□□□ -0.42
HNRNPC-219ENST00000555309 ZBTB7BO15156 539 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-219ENST00000555309 SLC5A1P13866 664 aa12.43□□□□□ -0.42
HNRNPC-219ENST00000555309 IL15P40933 162 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-219ENST00000555309 ECE1P42892 770 aa12.43□□□□□ -0.42
HNRNPC-219ENST00000555309 PHKA1P46020 1223 aa12.43□□□□□ -0.42
HNRNPC-219ENST00000555309 LBX1P52954 281 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms