RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 NR1I2O75469 434 aa14.88□□□□□ -0.03
PPP4R3A-206ENST00000554943 IFIT1P09914 478 aaKnown RBP14.88□□□□□ -0.03
PPP4R3A-206ENST00000554943 RNF214Q8ND24 703 aa14.88□□□□□ -0.03
PPP4R3A-206ENST00000554943 GOLPH3LQ9H4A5 285 aa14.88□□□□□ -0.03
PPP4R3A-206ENST00000554943 MYH6P13533 1939 aa14.88□□□□□ -0.03
PPP4R3A-206ENST00000554943 CTSWP56202 376 aa14.88□□□□□ -0.03
PPP4R3A-206ENST00000554943 TYRO3Q06418 890 aa14.88□□□□□ -0.03
PPP4R3A-206ENST00000554943 PUS7LQ9H0K6 701 aaKnown RBP14.88□□□□□ -0.03
PPP4R3A-206ENST00000554943 KIAA1524Q8TCG1 905 aa14.87□□□□□ -0.03
PPP4R3A-206ENST00000554943 PTPDC1A2A3K4 754 aa14.87□□□□□ -0.03
PPP4R3A-206ENST00000554943 TMOD3Q9NYL9 352 aa14.87□□□□□ -0.03
PPP4R3A-206ENST00000554943 RTEL1Q9NZ71 1219 aa14.87□□□□□ -0.03
PPP4R3A-206ENST00000554943 TACC3Q9Y6A5 838 aa14.87□□□□□ -0.03
PPP4R3A-206ENST00000554943 TAF1P21675 1872 aa14.87□□□□□ -0.03
PPP4R3A-206ENST00000554943 CAVIN2O95810 425 aa14.87□□□□□ -0.03
PPP4R3A-206ENST00000554943 UBE3CQ15386 1083 aa14.87□□□□□ -0.03
PPP4R3A-206ENST00000554943 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.87□□□□□ -0.03
PPP4R3A-206ENST00000554943 VPS37CA5D8V6 355 aaPredicted RBP14.86□□□□□ -0.03
PPP4R3A-206ENST00000554943 FGAP02671 866 aa14.86□□□□□ -0.03
PPP4R3A-206ENST00000554943 CCDC192P0DO97 292 aa14.86□□□□□ -0.03
PPP4R3A-206ENST00000554943 IL6STP40189 918 aaPredicted RBP14.86□□□□□ -0.03
PPP4R3A-206ENST00000554943 INTS5Q6P9B9 1019 aaKnown RBP14.86□□□□□ -0.03
PPP4R3A-206ENST00000554943 RGL2O15211 777 aa14.86□□□□□ -0.03
PPP4R3A-206ENST00000554943 MSNP26038 577 aaKnown RBP14.86□□□□□ -0.03
PPP4R3A-206ENST00000554943 APOBRQ0VD83 1088 aa14.86□□□□□ -0.03
PPP4R3A-206ENST00000554943 MAP3K11Q16584 847 aa14.86□□□□□ -0.03
PPP4R3A-206ENST00000554943 MORC2Q9Y6X9 1032 aaPredicted RBP14.86□□□□□ -0.03
PPP4R3A-206ENST00000554943 A0A1W2PQ27 194 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 A0A1W2PQ64 194 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 A0A1W2PQD8 194 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 TTLL5Q6EMB2 1281 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 SPATA32Q96LK8 384 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 NUP62CLQ9H1M0 184 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 DACT1Q9NYF0 836 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 FOCADQ5VW36 1801 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 EIF5P55010 431 aaKnown RBP14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 CBX8Q9HC52 389 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 ZAP70P43403 619 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 FMR1NBQ8N0W7 255 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 GREM2Q9H772 168 aa14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 COL1A1P02452 1464 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3A-206ENST00000554943 KCNJ4P48050 445 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 HSP90AB3PQ58FF7 597 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 SYNE4Q8N205 404 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 BPIFA3Q9BQP9 254 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 CFAP45Q9UL16 551 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 NTRK3Q16288 839 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 POLR3EQ9NVU0 708 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 CEP126Q9P2H0 1117 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 PDE8BO95263 885 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 LTBP1Q14766 1721 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 FAM89AQ96GI7 184 aa14.84□□□□□ -0.03
PPP4R3A-206ENST00000554943 CCDC88AQ3V6T2 1871 aa14.83□□□□□ -0.03
PPP4R3A-206ENST00000554943 BTAF1O14981 1849 aa14.83□□□□□ -0.03
PPP4R3A-206ENST00000554943 RRP9O43818 475 aaKnown RBP14.83□□□□□ -0.04
PPP4R3A-206ENST00000554943 FERMT3Q86UX7 667 aa14.83□□□□□ -0.04
PPP4R3A-206ENST00000554943 FAM217BQ9NTX9 383 aaPredicted RBP14.83□□□□□ -0.04
PPP4R3A-206ENST00000554943 CCDC57Q2TAC2 916 aa14.83□□□□□ -0.04
PPP4R3A-206ENST00000554943 SGMS1Q86VZ5 419 aa14.83□□□□□ -0.04
PPP4R3A-206ENST00000554943 DHX40Q8IX18 779 aaKnown RBP14.83□□□□□ -0.04
PPP4R3A-206ENST00000554943 PIH1D3Q9NQM4 214 aaKnown RBP14.83□□□□□ -0.04
PPP4R3A-206ENST00000554943 CTNNA3Q9UI47 895 aa14.83□□□□□ -0.04
PPP4R3A-206ENST00000554943 ITGA6P23229 1130 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 STK3Q13188 491 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 USP28Q96RU2 1077 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 TNRC6CQ9HCJ0 1690 aaKnown RBP14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 ZNF804BA4D1E1 1349 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 MROH5Q6ZUA9 1318 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 TPM3P06753 285 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 IGDCC4Q8TDY8 1250 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 PDE8AO60658 829 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 STARD3NLO95772 234 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 KIAA2012Q0VF49 1180 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 AXDND1Q5T1B0 1012 aaPredicted RBP14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 LINC00301Q8NCQ3 95 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 CHMP4CQ96CF2 233 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 MTA3Q9BTC8 594 aa14.82□□□□□ -0.04
PPP4R3A-206ENST00000554943 LRRC37AA6NMS7 1700 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 SH2B2O14492 632 aaPredicted RBP14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 CCDC158Q5M9N0 1113 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 SASS6Q6UVJ0 657 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 TBC1D10CQ8IV04 446 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 ELOA2Q8IYF1 753 aaPredicted RBP14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 THRAP3Q9Y2W1 955 aaKnown RBP14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 IFIT5Q13325 482 aaKnown RBP14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 LRRFIP1Q32MZ4 808 aaKnown RBP14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 KIF6Q6ZMV9 814 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 FBXO18Q8NFZ0 1043 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 GPHNQ9NQX3 736 aaPredicted RBP14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 HPSEQ9Y251 543 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 ZBTB1Q9Y2K1 713 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 PNPLA7Q6ZV29 1317 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 STK36Q9NRP7 1315 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 CTAGE5O15320 804 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 GPAA1O43292 621 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 NOLC1Q14978 699 aaKnown RBP eCLIP14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 ADALQ6DHV7 355 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 NEUROD6Q96NK8 337 aa14.81□□□□□ -0.04
PPP4R3A-206ENST00000554943 MAP3K14Q99558 947 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms