RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ANKRD18BA2A2Z9 1011 aa17.69■□□□□ 0.42
SPTLC2-202ENST00000554365 BCAR3O75815 825 aa17.69■□□□□ 0.42
SPTLC2-202ENST00000554365 CASP7P55210 303 aa17.69■□□□□ 0.42
SPTLC2-202ENST00000554365 ALDH1L2Q3SY69 923 aa17.69■□□□□ 0.42
SPTLC2-202ENST00000554365 LINS1Q8NG48 757 aa17.69■□□□□ 0.42
SPTLC2-202ENST00000554365 ANGEL1Q9UNK9 670 aaKnown RBP17.69■□□□□ 0.42
SPTLC2-202ENST00000554365 FZD1Q9UP38 647 aa17.69■□□□□ 0.42
SPTLC2-202ENST00000554365 GPR25O00155 361 aa17.68■□□□□ 0.42
SPTLC2-202ENST00000554365 SNAP23O00161 211 aa17.68■□□□□ 0.42
SPTLC2-202ENST00000554365 DLGAP5Q15398 846 aa17.68■□□□□ 0.42
SPTLC2-202ENST00000554365 MRPL50Q8N5N7 158 aaKnown RBP17.68■□□□□ 0.42
SPTLC2-202ENST00000554365 HELBQ8NG08 1087 aaPredicted RBP17.68■□□□□ 0.42
SPTLC2-202ENST00000554365 CD209Q9NNX6 404 aa17.68■□□□□ 0.42
SPTLC2-202ENST00000554365 CHMP3Q9Y3E7 222 aa17.68■□□□□ 0.42
SPTLC2-202ENST00000554365 TAF5LO75529 589 aa17.67■□□□□ 0.42
SPTLC2-202ENST00000554365 ZBED3Q96IU2 234 aaPredicted RBP17.67■□□□□ 0.42
SPTLC2-202ENST00000554365 F8W031 263 aaPredicted RBP17.66■□□□□ 0.42
SPTLC2-202ENST00000554365 LDLRAD1Q5T700 205 aa17.66■□□□□ 0.42
SPTLC2-202ENST00000554365 SPRYD7Q5W111 196 aa17.66■□□□□ 0.42
SPTLC2-202ENST00000554365 CERS5Q8N5B7 392 aa17.66■□□□□ 0.42
SPTLC2-202ENST00000554365 DEFB129Q9H1M3 183 aa17.66■□□□□ 0.42
SPTLC2-202ENST00000554365 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
SPTLC2-202ENST00000554365 COL1A1P02452 1464 aaPredicted RBP17.65■□□□□ 0.42
SPTLC2-202ENST00000554365 FKTNO75072 461 aa17.65■□□□□ 0.42
SPTLC2-202ENST00000554365 IFIT5Q13325 482 aaKnown RBP17.65■□□□□ 0.42
SPTLC2-202ENST00000554365 SLC10A4Q96EP9 437 aa17.65■□□□□ 0.42
SPTLC2-202ENST00000554365 R3HDMLQ9H3Y0 253 aa17.65■□□□□ 0.42
SPTLC2-202ENST00000554365 SMC4Q9NTJ3 1288 aa17.65■□□□□ 0.42
SPTLC2-202ENST00000554365 PCDHAC2Q9Y5I4 1007 aa17.65■□□□□ 0.42
SPTLC2-202ENST00000554365 FOXO4P98177 505 aa17.64■□□□□ 0.41
SPTLC2-202ENST00000554365 NOM1Q5C9Z4 860 aaKnown RBP17.64■□□□□ 0.41
SPTLC2-202ENST00000554365 ZNF804AQ7Z570 1209 aa17.64■□□□□ 0.41
SPTLC2-202ENST00000554365 JAG2Q9Y219 1238 aa17.64■□□□□ 0.41
SPTLC2-202ENST00000554365 IRS2Q9Y4H2 1338 aa17.64■□□□□ 0.41
SPTLC2-202ENST00000554365 CLRN2A0PK11 232 aa17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 F6X3S4 739 aa17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 MYO1BO43795 1136 aa17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 PLIN1O60240 522 aa17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 CFAP100Q494V2 611 aa17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 FBXO46Q6PJ61 603 aaPredicted RBP17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 C15orf52Q6ZUT6 534 aaKnown RBP17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 MTMR14Q8NCE2 650 aa17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 CFHR5Q9BXR6 569 aa17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 VEZTQ9HBM0 779 aa17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 PPP2R3BQ9Y5P8 575 aa17.63■□□□□ 0.41
SPTLC2-202ENST00000554365 MANSC4A6NHS7 340 aaPredicted RBP17.62■□□□□ 0.41
SPTLC2-202ENST00000554365 PPP1R12BO60237 982 aaPredicted RBP17.62■□□□□ 0.41
SPTLC2-202ENST00000554365 ALDH1A1P00352 501 aa17.62■□□□□ 0.41
SPTLC2-202ENST00000554365 RRP1P56182 461 aaKnown RBP17.62■□□□□ 0.41
SPTLC2-202ENST00000554365 TAF7LQ5H9L4 462 aa17.62■□□□□ 0.41
SPTLC2-202ENST00000554365 LMBR1LQ6UX01 489 aa17.62■□□□□ 0.41
SPTLC2-202ENST00000554365 CLMNQ96JQ2 1002 aa17.62■□□□□ 0.41
SPTLC2-202ENST00000554365 SSC5DA1L4H1 1573 aa17.62■□□□□ 0.41
SPTLC2-202ENST00000554365 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
SPTLC2-202ENST00000554365 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
SPTLC2-202ENST00000554365 IL1R1P14778 569 aa17.61■□□□□ 0.41
SPTLC2-202ENST00000554365 RBM5P52756 815 aaKnown RBP eCLIP17.61■□□□□ 0.41
SPTLC2-202ENST00000554365 INHBEP58166 350 aa17.61■□□□□ 0.41
SPTLC2-202ENST00000554365 CCDC57Q2TAC2 916 aa17.61■□□□□ 0.41
SPTLC2-202ENST00000554365 BEND3Q5T5X7 828 aa17.61■□□□□ 0.41
SPTLC2-202ENST00000554365 PRPF38BQ5VTL8 546 aaKnown RBP17.61■□□□□ 0.41
SPTLC2-202ENST00000554365 ZNF594Q96JF6 807 aaPredicted RBP17.61■□□□□ 0.41
SPTLC2-202ENST00000554365 PRMT6Q96LA8 375 aaPredicted RBP17.61■□□□□ 0.41
SPTLC2-202ENST00000554365 ZBTB48P10074 688 aaPredicted RBP17.6■□□□□ 0.41
SPTLC2-202ENST00000554365 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
SPTLC2-202ENST00000554365 SUPT20HL1Q3ZLR7 823 aa17.6■□□□□ 0.41
SPTLC2-202ENST00000554365 LDHAL6AQ6ZMR3 332 aa17.6■□□□□ 0.41
SPTLC2-202ENST00000554365 IFNL1Q8IU54 200 aa17.6■□□□□ 0.41
SPTLC2-202ENST00000554365 WNK4Q96J92 1243 aa17.6■□□□□ 0.41
SPTLC2-202ENST00000554365 CNNM1Q9NRU3 951 aa17.6■□□□□ 0.41
SPTLC2-202ENST00000554365 NOB1Q9ULX3 412 aaKnown RBP17.6■□□□□ 0.41
SPTLC2-202ENST00000554365 TNNQ9UQP3 1299 aa17.6■□□□□ 0.41
SPTLC2-202ENST00000554365 PDE4DIPQ5VU43 2346 aa17.6■□□□□ 0.41
SPTLC2-202ENST00000554365 KIF16BQ96L93 1317 aa17.59■□□□□ 0.41
SPTLC2-202ENST00000554365 FKBP1AP62942 108 aaKnown RBP17.59■□□□□ 0.41
SPTLC2-202ENST00000554365 EPHA10Q5JZY3 1008 aa17.59■□□□□ 0.41
SPTLC2-202ENST00000554365 NBPF12Q5TAG4 269 aaPredicted RBP17.59■□□□□ 0.41
SPTLC2-202ENST00000554365 A0A1B0GUL6 1792 aa17.58■□□□□ 0.41
SPTLC2-202ENST00000554365 AOX1Q06278 1338 aa17.58■□□□□ 0.4
SPTLC2-202ENST00000554365 GRM8O00222 908 aa17.58■□□□□ 0.4
SPTLC2-202ENST00000554365 IGF2BP3O00425 579 aaKnown RBP eCLIP17.58■□□□□ 0.4
SPTLC2-202ENST00000554365 TRIM17Q9Y577 477 aa17.58■□□□□ 0.4
SPTLC2-202ENST00000554365 ECM29Q5VYK3 1845 aa17.58■□□□□ 0.4
SPTLC2-202ENST00000554365 IREB2P48200 963 aaKnown RBP17.57■□□□□ 0.4
SPTLC2-202ENST00000554365 RASA3Q14644 834 aa17.57■□□□□ 0.4
SPTLC2-202ENST00000554365 C9orf78Q9NZ63 289 aaPredicted RBP17.57■□□□□ 0.4
SPTLC2-202ENST00000554365 UNCXA6NJT0 531 aa17.56■□□□□ 0.4
SPTLC2-202ENST00000554365 USP2O75604 605 aaPredicted RBP17.56■□□□□ 0.4
SPTLC2-202ENST00000554365 C20orf194Q5TEA3 1177 aa17.56■□□□□ 0.4
SPTLC2-202ENST00000554365 SLC4A10Q6U841 1118 aa17.56■□□□□ 0.4
SPTLC2-202ENST00000554365 OTOP1Q7RTM1 612 aa17.56■□□□□ 0.4
SPTLC2-202ENST00000554365 ARHGAP45Q92619 1136 aa17.56■□□□□ 0.4
SPTLC2-202ENST00000554365 FRAT1Q92837 279 aaPredicted RBP17.56■□□□□ 0.4
SPTLC2-202ENST00000554365 PCDH10Q9P2E7 1040 aa17.56■□□□□ 0.4
SPTLC2-202ENST00000554365 PTPRCP08575 1304 aa17.55■□□□□ 0.4
SPTLC2-202ENST00000554365 TRIM27P14373 513 aa17.55■□□□□ 0.4
SPTLC2-202ENST00000554365 GJA5P36382 358 aa17.55■□□□□ 0.4
SPTLC2-202ENST00000554365 GYG1P46976 350 aa17.55■□□□□ 0.4
SPTLC2-202ENST00000554365 MFSD14BQ5SR56 506 aa17.55■□□□□ 0.4
SPTLC2-202ENST00000554365 ZKSCAN2Q63HK3 967 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 235.3 ms