RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 SSC5DA1L4H1 1573 aa14.68□□□□□ -0.06
PRPF40B-212ENST00000551111 OTOFQ9HC10 1997 aa14.68□□□□□ -0.06
PRPF40B-212ENST00000551111 SUCLG2Q96I99 432 aa14.68□□□□□ -0.06
PRPF40B-212ENST00000551111 PRMT6Q96LA8 375 aaPredicted RBP14.68□□□□□ -0.06
PRPF40B-212ENST00000551111 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.68□□□□□ -0.06
PRPF40B-212ENST00000551111 CLRN2A0PK11 232 aa14.67□□□□□ -0.06
PRPF40B-212ENST00000551111 NBPF7P0C2Y1 421 aaPredicted RBP14.67□□□□□ -0.06
PRPF40B-212ENST00000551111 IL1R1P14778 569 aa14.67□□□□□ -0.06
PRPF40B-212ENST00000551111 MLLT1Q03111 559 aaPredicted RBP14.67□□□□□ -0.06
PRPF40B-212ENST00000551111 LDHAL6AQ6ZMR3 332 aa14.67□□□□□ -0.06
PRPF40B-212ENST00000551111 HDAC9Q9UKV0 1011 aa14.67□□□□□ -0.06
PRPF40B-212ENST00000551111 LAMB1P07942 1786 aa14.67□□□□□ -0.06
PRPF40B-212ENST00000551111 ZNF521Q96K83 1311 aa14.66□□□□□ -0.06
PRPF40B-212ENST00000551111 ARAP2Q8WZ64 1704 aa14.66□□□□□ -0.06
PRPF40B-212ENST00000551111 DLGAP5Q15398 846 aa14.66□□□□□ -0.06
PRPF40B-212ENST00000551111 LDLRAD1Q5T700 205 aa14.66□□□□□ -0.06
PRPF40B-212ENST00000551111 CLMNQ96JQ2 1002 aa14.66□□□□□ -0.06
PRPF40B-212ENST00000551111 DEFB129Q9H1M3 183 aa14.66□□□□□ -0.06
PRPF40B-212ENST00000551111 CNNM1Q9NRU3 951 aa14.66□□□□□ -0.06
PRPF40B-212ENST00000551111 C9orf78Q9NZ63 289 aaPredicted RBP14.66□□□□□ -0.06
PRPF40B-212ENST00000551111 ANGEL1Q9UNK9 670 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-212ENST00000551111 GYG1P46976 350 aa14.65□□□□□ -0.06
PRPF40B-212ENST00000551111 TM4SF4P48230 202 aa14.65□□□□□ -0.06
PRPF40B-212ENST00000551111 SOX10P56693 466 aa14.65□□□□□ -0.06
PRPF40B-212ENST00000551111 GRIK5Q16478 980 aa14.65□□□□□ -0.06
PRPF40B-212ENST00000551111 CCDC57Q2TAC2 916 aa14.65□□□□□ -0.06
PRPF40B-212ENST00000551111 CFAP100Q494V2 611 aa14.65□□□□□ -0.06
PRPF40B-212ENST00000551111 APOBEC3FQ8IUX4 373 aaKnown RBP14.65□□□□□ -0.06
PRPF40B-212ENST00000551111 MTMR14Q8NCE2 650 aa14.65□□□□□ -0.06
PRPF40B-212ENST00000551111 SRCIN1Q9C0H9 1055 aa14.65□□□□□ -0.06
PRPF40B-212ENST00000551111 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 TAF7LQ5H9L4 462 aa14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 NBPF12Q5TAG4 269 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 ZNF804AQ7Z570 1209 aa14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 CDAN1Q8IWY9 1227 aa14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 MRPL50Q8N5N7 158 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 ZNF296Q8WUU4 475 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 FAM84BQ96KN1 310 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 RIPOR2Q9Y4F9 1068 aa14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 MYH13Q9UKX3 1938 aa14.64□□□□□ -0.07
PRPF40B-212ENST00000551111 NF2P35240 595 aa14.63□□□□□ -0.07
PRPF40B-212ENST00000551111 LRRC24Q50LG9 513 aa14.63□□□□□ -0.07
PRPF40B-212ENST00000551111 SPRYD7Q5W111 196 aa14.63□□□□□ -0.07
PRPF40B-212ENST00000551111 CTU1Q7Z7A3 348 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-212ENST00000551111 TDRD7Q8NHU6 1098 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-212ENST00000551111 KLHDC4Q8TBB5 520 aa14.63□□□□□ -0.07
PRPF40B-212ENST00000551111 BICC1Q9H694 974 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-212ENST00000551111 IQSEC3Q9UPP2 1182 aaPredicted RBP14.63□□□□□ -0.07
PRPF40B-212ENST00000551111 CENPFP49454 3210 aa14.63□□□□□ -0.07
PRPF40B-212ENST00000551111 MMP14P50281 582 aa14.62□□□□□ -0.07
PRPF40B-212ENST00000551111 ARMC9Q7Z3E5 817 aa14.62□□□□□ -0.07
PRPF40B-212ENST00000551111 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-212ENST00000551111 ANKRD44Q8N8A2 993 aa14.62□□□□□ -0.07
PRPF40B-212ENST00000551111 VEZTQ9HBM0 779 aa14.62□□□□□ -0.07
PRPF40B-212ENST00000551111 HTTP42858 3142 aa14.62□□□□□ -0.07
PRPF40B-212ENST00000551111 UTYO14607 1347 aa14.62□□□□□ -0.07
PRPF40B-212ENST00000551111 FAM205AQ6ZU69 1335 aa14.62□□□□□ -0.07
PRPF40B-212ENST00000551111 GPR25O00155 361 aa14.61□□□□□ -0.07
PRPF40B-212ENST00000551111 GJA5P36382 358 aa14.61□□□□□ -0.07
PRPF40B-212ENST00000551111 ZEB1P37275 1124 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-212ENST00000551111 RBM5P52756 815 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRPF40B-212ENST00000551111 FKBP1AP62942 108 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-212ENST00000551111 UBE4AQ14139 1066 aa14.61□□□□□ -0.07
PRPF40B-212ENST00000551111 USP2O75604 605 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 HIBADHP31937 336 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 RASA3Q14644 834 aa14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 MFSD14BQ5SR56 506 aa14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 SSH1Q8WYL5 1049 aa14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 SLC10A4Q96EP9 437 aa14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 TDRD3Q9H7E2 651 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 TTF2Q9UNY4 1162 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 HPS5Q9UPZ3 1129 aa14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 COL1A1P02452 1464 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-212ENST00000551111 IGF2BP3O00425 579 aaKnown RBP eCLIP14.59□□□□□ -0.07
PRPF40B-212ENST00000551111 RABL6Q3YEC7 729 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-212ENST00000551111 FBXO33Q7Z6M2 555 aa14.59□□□□□ -0.07
PRPF40B-212ENST00000551111 VGLL2Q8N8G2 317 aa14.59□□□□□ -0.07
PRPF40B-212ENST00000551111 CDCA7LQ96GN5 454 aa14.59□□□□□ -0.07
PRPF40B-212ENST00000551111 WNK4Q96J92 1243 aa14.59□□□□□ -0.07
PRPF40B-212ENST00000551111 ZNF70Q9UC06 446 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-212ENST00000551111 AK9Q5TCS8 1911 aa14.58□□□□□ -0.07
PRPF40B-212ENST00000551111 CAP1Q01518 475 aa14.58□□□□□ -0.08
PRPF40B-212ENST00000551111 DZIP1LQ8IYY4 767 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-212ENST00000551111 TEPSINQ96N21 525 aa14.58□□□□□ -0.08
PRPF40B-212ENST00000551111 USP44Q9H0E7 712 aa14.58□□□□□ -0.08
PRPF40B-212ENST00000551111 BCAMP50895 628 aa14.57□□□□□ -0.08
PRPF40B-212ENST00000551111 CHAF1AQ13111 956 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-212ENST00000551111 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
PRPF40B-212ENST00000551111 IFNL1Q8IU54 200 aa14.57□□□□□ -0.08
PRPF40B-212ENST00000551111 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
PRPF40B-212ENST00000551111 KIAA0100Q14667 2235 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-212ENST00000551111 ZSWIM8A7E2V4 1837 aa14.57□□□□□ -0.08
PRPF40B-212ENST00000551111 MKI67P46013 3256 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 TCP10L2B9ZVM9 353 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 MYO1BO43795 1136 aa14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 PPP1R12BO60237 982 aaPredicted RBP14.56□□□□□ -0.08
PRPF40B-212ENST00000551111 CRKP46108 304 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms