RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 WDR63Q8IWG1 891 aa19.61■□□□□ 0.73
RAB5C-205ENST00000550013 F8W031 263 aaPredicted RBP19.6■□□□□ 0.73
RAB5C-205ENST00000550013 LMBR1LQ6UX01 489 aa19.6■□□□□ 0.73
RAB5C-205ENST00000550013 ZNF594Q96JF6 807 aaPredicted RBP19.6■□□□□ 0.73
RAB5C-205ENST00000550013 DEFB129Q9H1M3 183 aa19.6■□□□□ 0.73
RAB5C-205ENST00000550013 R3HDMLQ9H3Y0 253 aa19.6■□□□□ 0.73
RAB5C-205ENST00000550013 SPINK5Q9NQ38 1064 aaPredicted RBP19.6■□□□□ 0.73
RAB5C-205ENST00000550013 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.6■□□□□ 0.73
RAB5C-205ENST00000550013 JAG2Q9Y219 1238 aa19.6■□□□□ 0.73
RAB5C-205ENST00000550013 SSC5DA1L4H1 1573 aa19.6■□□□□ 0.73
RAB5C-205ENST00000550013 COL1A1P02452 1464 aaPredicted RBP19.6■□□□□ 0.73
RAB5C-205ENST00000550013 AOX1Q06278 1338 aa19.59■□□□□ 0.73
RAB5C-205ENST00000550013 GPR25O00155 361 aa19.59■□□□□ 0.73
RAB5C-205ENST00000550013 IL1R1P14778 569 aa19.59■□□□□ 0.73
RAB5C-205ENST00000550013 SREBF2Q12772 1141 aa19.59■□□□□ 0.73
RAB5C-205ENST00000550013 SPRYD7Q5W111 196 aa19.59■□□□□ 0.73
RAB5C-205ENST00000550013 ZNF804AQ7Z570 1209 aa19.59■□□□□ 0.73
RAB5C-205ENST00000550013 MTMR14Q8NCE2 650 aa19.59■□□□□ 0.73
RAB5C-205ENST00000550013 CLRN2A0PK11 232 aa19.58■□□□□ 0.72
RAB5C-205ENST00000550013 PLIN1O60240 522 aa19.58■□□□□ 0.72
RAB5C-205ENST00000550013 CFAP100Q494V2 611 aa19.58■□□□□ 0.72
RAB5C-205ENST00000550013 PKN2Q16513 984 aaKnown RBP19.57■□□□□ 0.72
RAB5C-205ENST00000550013 NOM1Q5C9Z4 860 aaKnown RBP19.57■□□□□ 0.72
RAB5C-205ENST00000550013 CLMNQ96JQ2 1002 aa19.57■□□□□ 0.72
RAB5C-205ENST00000550013 SPDYE2BA6NHP3 402 aa19.56■□□□□ 0.72
RAB5C-205ENST00000550013 GRM8O00222 908 aa19.56■□□□□ 0.72
RAB5C-205ENST00000550013 SPDYE6P0CI01 402 aa19.56■□□□□ 0.72
RAB5C-205ENST00000550013 CCDC57Q2TAC2 916 aa19.56■□□□□ 0.72
RAB5C-205ENST00000550013 TAF7LQ5H9L4 462 aa19.56■□□□□ 0.72
RAB5C-205ENST00000550013 LDHAL6AQ6ZMR3 332 aa19.56■□□□□ 0.72
RAB5C-205ENST00000550013 SLC10A4Q96EP9 437 aa19.56■□□□□ 0.72
RAB5C-205ENST00000550013 PRMT6Q96LA8 375 aaPredicted RBP19.56■□□□□ 0.72
RAB5C-205ENST00000550013 FKTNO75072 461 aa19.55■□□□□ 0.72
RAB5C-205ENST00000550013 FKBP1AP62942 108 aaKnown RBP19.55■□□□□ 0.72
RAB5C-205ENST00000550013 MAP3K11Q16584 847 aa19.55■□□□□ 0.72
RAB5C-205ENST00000550013 CFHR5Q9BXR6 569 aa19.55■□□□□ 0.72
RAB5C-205ENST00000550013 VEZTQ9HBM0 779 aa19.55■□□□□ 0.72
RAB5C-205ENST00000550013 CNNM1Q9NRU3 951 aa19.55■□□□□ 0.72
RAB5C-205ENST00000550013 LAMB1P07942 1786 aa19.55■□□□□ 0.72
RAB5C-205ENST00000550013 WNK4Q96J92 1243 aa19.54■□□□□ 0.72
RAB5C-205ENST00000550013 PPP2R3BQ9Y5P8 575 aa19.54■□□□□ 0.72
RAB5C-205ENST00000550013 MYO1BO43795 1136 aa19.53■□□□□ 0.72
RAB5C-205ENST00000550013 PPP1R12BO60237 982 aaPredicted RBP19.53■□□□□ 0.72
RAB5C-205ENST00000550013 RBM5P52756 815 aaKnown RBP eCLIP19.53■□□□□ 0.72
RAB5C-205ENST00000550013 NBPF12Q5TAG4 269 aaPredicted RBP19.53■□□□□ 0.72
RAB5C-205ENST00000550013 FBXO46Q6PJ61 603 aaPredicted RBP19.53■□□□□ 0.72
RAB5C-205ENST00000550013 SLC4A10Q6U841 1118 aa19.53■□□□□ 0.72
RAB5C-205ENST00000550013 C9orf78Q9NZ63 289 aaPredicted RBP19.53■□□□□ 0.72
RAB5C-205ENST00000550013 OTOFQ9HC10 1997 aa19.52■□□□□ 0.72
RAB5C-205ENST00000550013 MANSC4A6NHS7 340 aaPredicted RBP19.52■□□□□ 0.72
RAB5C-205ENST00000550013 IFNL1Q8IU54 200 aa19.52■□□□□ 0.72
RAB5C-205ENST00000550013 PUS3Q9BZE2 481 aaKnown RBP19.52■□□□□ 0.72
RAB5C-205ENST00000550013 HTTP42858 3142 aa19.52■□□□□ 0.72
RAB5C-205ENST00000550013 FAM205AQ6ZU69 1335 aa19.51■□□□□ 0.71
RAB5C-205ENST00000550013 ARAP2Q8WZ64 1704 aa19.51■□□□□ 0.71
RAB5C-205ENST00000550013 IGF2BP3O00425 579 aaKnown RBP eCLIP19.51■□□□□ 0.71
RAB5C-205ENST00000550013 ANP32CO43423 234 aa19.51■□□□□ 0.71
RAB5C-205ENST00000550013 ALDH1L1O75891 902 aa19.51■□□□□ 0.71
RAB5C-205ENST00000550013 ALDH1A1P00352 501 aa19.51■□□□□ 0.71
RAB5C-205ENST00000550013 ZBTB48P10074 688 aaPredicted RBP19.51■□□□□ 0.71
RAB5C-205ENST00000550013 GYG1P46976 350 aa19.51■□□□□ 0.71
RAB5C-205ENST00000550013 RASA3Q14644 834 aa19.51■□□□□ 0.71
RAB5C-205ENST00000550013 SUPT20HL1Q3ZLR7 823 aa19.51■□□□□ 0.71
RAB5C-205ENST00000550013 SUCLG2Q96I99 432 aa19.51■□□□□ 0.71
RAB5C-205ENST00000550013 USP2O75604 605 aaPredicted RBP19.5■□□□□ 0.71
RAB5C-205ENST00000550013 GJA5P36382 358 aa19.5■□□□□ 0.71
RAB5C-205ENST00000550013 MFSD14BQ5SR56 506 aa19.5■□□□□ 0.71
RAB5C-205ENST00000550013 TDRD7Q8NHU6 1098 aaKnown RBP19.5■□□□□ 0.71
RAB5C-205ENST00000550013 KAZALD1Q96I82 304 aa19.5■□□□□ 0.71
RAB5C-205ENST00000550013 SRCIN1Q9C0H9 1055 aa19.5■□□□□ 0.71
RAB5C-205ENST00000550013 HIBADHP31937 336 aaKnown RBP19.49■□□□□ 0.71
RAB5C-205ENST00000550013 IREB2P48200 963 aaKnown RBP19.49■□□□□ 0.71
RAB5C-205ENST00000550013 INHBEP58166 350 aa19.49■□□□□ 0.71
RAB5C-205ENST00000550013 UBE4AQ14139 1066 aa19.49■□□□□ 0.71
RAB5C-205ENST00000550013 FAM84BQ96KN1 310 aaPredicted RBP19.49■□□□□ 0.71
RAB5C-205ENST00000550013 ZNF70Q9UC06 446 aaPredicted RBP19.49■□□□□ 0.71
RAB5C-205ENST00000550013 TTF2Q9UNY4 1162 aaKnown RBP19.49■□□□□ 0.71
RAB5C-205ENST00000550013 SPDYE2Q495Y8 402 aa19.48■□□□□ 0.71
RAB5C-205ENST00000550013 CDAN1Q8IWY9 1227 aa19.48■□□□□ 0.71
RAB5C-205ENST00000550013 TDRD3Q9H7E2 651 aaKnown RBP19.48■□□□□ 0.71
RAB5C-205ENST00000550013 UNCXA6NJT0 531 aa19.47■□□□□ 0.71
RAB5C-205ENST00000550013 NBPF7P0C2Y1 421 aaPredicted RBP19.47■□□□□ 0.71
RAB5C-205ENST00000550013 FAM9BQ8IZU0 186 aa19.47■□□□□ 0.71
RAB5C-205ENST00000550013 RIPOR2Q9Y4F9 1068 aa19.47■□□□□ 0.71
RAB5C-205ENST00000550013 TRIM17Q9Y577 477 aa19.47■□□□□ 0.71
RAB5C-205ENST00000550013 GRIK5Q16478 980 aa19.46■□□□□ 0.71
RAB5C-205ENST00000550013 PRPF38BQ5VTL8 546 aaKnown RBP19.46■□□□□ 0.71
RAB5C-205ENST00000550013 OTOP1Q7RTM1 612 aa19.46■□□□□ 0.71
RAB5C-205ENST00000550013 ANKRD13AQ8IZ07 590 aa19.46■□□□□ 0.71
RAB5C-205ENST00000550013 ELP3Q9H9T3 547 aa19.46■□□□□ 0.71
RAB5C-205ENST00000550013 SERPINA10Q9UK55 444 aa19.46■□□□□ 0.71
RAB5C-205ENST00000550013 IQSEC3Q9UPP2 1182 aaPredicted RBP19.46■□□□□ 0.71
RAB5C-205ENST00000550013 CRHR2Q13324 411 aa19.45■□□□□ 0.7
RAB5C-205ENST00000550013 DZIP1LQ8IYY4 767 aaKnown RBP19.45■□□□□ 0.7
RAB5C-205ENST00000550013 TEPSINQ96N21 525 aa19.45■□□□□ 0.7
RAB5C-205ENST00000550013 PTPN18Q99952 460 aa19.45■□□□□ 0.7
RAB5C-205ENST00000550013 BICC1Q9H694 974 aaKnown RBP19.45■□□□□ 0.7
RAB5C-205ENST00000550013 TCP10L2B9ZVM9 353 aa19.44■□□□□ 0.7
RAB5C-205ENST00000550013 CRKP46108 304 aa19.44■□□□□ 0.7
RAB5C-205ENST00000550013 CHAF1AQ13111 956 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms