RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 ALDH1A1P00352 501 aa16.7■□□□□ 0.26
SCARB1-207ENST00000541661 IL1R1P14778 569 aa16.7■□□□□ 0.26
SCARB1-207ENST00000541661 FKBP1AP62942 108 aaKnown RBP16.7■□□□□ 0.26
SCARB1-207ENST00000541661 FOXO4P98177 505 aa16.7■□□□□ 0.26
SCARB1-207ENST00000541661 FKBP5Q13451 457 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-207ENST00000541661 PRPF38BQ5VTL8 546 aaKnown RBP16.7■□□□□ 0.26
SCARB1-207ENST00000541661 MANSC4A6NHS7 340 aaPredicted RBP16.69■□□□□ 0.26
SCARB1-207ENST00000541661 CCDC184Q52MB2 194 aa16.69■□□□□ 0.26
SCARB1-207ENST00000541661 SLC10A4Q96EP9 437 aa16.69■□□□□ 0.26
SCARB1-207ENST00000541661 SNAP23O00161 211 aa16.68■□□□□ 0.26
SCARB1-207ENST00000541661 VAMP4O75379 141 aa16.68■□□□□ 0.26
SCARB1-207ENST00000541661 TAF5LO75529 589 aa16.68■□□□□ 0.26
SCARB1-207ENST00000541661 ZBTB48P10074 688 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-207ENST00000541661 IFIT5Q13325 482 aaKnown RBP16.68■□□□□ 0.26
SCARB1-207ENST00000541661 FZD1Q9UP38 647 aa16.68■□□□□ 0.26
SCARB1-207ENST00000541661 SSC5DA1L4H1 1573 aa16.68■□□□□ 0.26
SCARB1-207ENST00000541661 PPP1R12BO60237 982 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-207ENST00000541661 ZNF804AQ7Z570 1209 aa16.67■□□□□ 0.26
SCARB1-207ENST00000541661 IFNL1Q8IU54 200 aa16.67■□□□□ 0.26
SCARB1-207ENST00000541661 HELBQ8NG08 1087 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-207ENST00000541661 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
SCARB1-207ENST00000541661 SPDYE2BA6NHP3 402 aa16.66■□□□□ 0.26
SCARB1-207ENST00000541661 MYO1BO43795 1136 aa16.66■□□□□ 0.26
SCARB1-207ENST00000541661 SPDYE6P0CI01 402 aa16.66■□□□□ 0.26
SCARB1-207ENST00000541661 SUPT20HL1Q3ZLR7 823 aa16.66■□□□□ 0.26
SCARB1-207ENST00000541661 CFAP100Q494V2 611 aa16.66■□□□□ 0.26
SCARB1-207ENST00000541661 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
SCARB1-207ENST00000541661 WNK4Q96J92 1243 aa16.66■□□□□ 0.26
SCARB1-207ENST00000541661 PRMT6Q96LA8 375 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-207ENST00000541661 PCDHAC2Q9Y5I4 1007 aa16.66■□□□□ 0.26
SCARB1-207ENST00000541661 WDR63Q8IWG1 891 aa16.65■□□□□ 0.26
SCARB1-207ENST00000541661 CLMNQ96JQ2 1002 aa16.65■□□□□ 0.26
SCARB1-207ENST00000541661 IGF2BP3O00425 579 aaKnown RBP eCLIP16.64■□□□□ 0.25
SCARB1-207ENST00000541661 NBPF12Q5TAG4 269 aaPredicted RBP16.64■□□□□ 0.25
SCARB1-207ENST00000541661 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
SCARB1-207ENST00000541661 FAM205AQ6ZU69 1335 aa16.64■□□□□ 0.25
SCARB1-207ENST00000541661 HTTP42858 3142 aa16.63■□□□□ 0.25
SCARB1-207ENST00000541661 CLRN2A0PK11 232 aa16.63■□□□□ 0.25
SCARB1-207ENST00000541661 F6X3S4 739 aa16.63■□□□□ 0.25
SCARB1-207ENST00000541661 F8W031 263 aaPredicted RBP16.63■□□□□ 0.25
SCARB1-207ENST00000541661 USP2O75604 605 aaPredicted RBP16.63■□□□□ 0.25
SCARB1-207ENST00000541661 CCDC57Q2TAC2 916 aa16.63■□□□□ 0.25
SCARB1-207ENST00000541661 EPHA10Q5JZY3 1008 aa16.63■□□□□ 0.25
SCARB1-207ENST00000541661 LDHAL6AQ6ZMR3 332 aa16.63■□□□□ 0.25
SCARB1-207ENST00000541661 CHMP3Q9Y3E7 222 aa16.63■□□□□ 0.25
SCARB1-207ENST00000541661 AOX1Q06278 1338 aa16.63■□□□□ 0.25
SCARB1-207ENST00000541661 IREB2P48200 963 aaKnown RBP16.62■□□□□ 0.25
SCARB1-207ENST00000541661 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
SCARB1-207ENST00000541661 OTOP1Q7RTM1 612 aa16.62■□□□□ 0.25
SCARB1-207ENST00000541661 ZNF594Q96JF6 807 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-207ENST00000541661 TESPA1A2RU30 521 aaPredicted RBP16.61■□□□□ 0.25
SCARB1-207ENST00000541661 GRM8O00222 908 aa16.61■□□□□ 0.25
SCARB1-207ENST00000541661 GJA5P36382 358 aa16.61■□□□□ 0.25
SCARB1-207ENST00000541661 RASA3Q14644 834 aa16.61■□□□□ 0.25
SCARB1-207ENST00000541661 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
SCARB1-207ENST00000541661 ANKRD13AQ8IZ07 590 aa16.61■□□□□ 0.25
SCARB1-207ENST00000541661 TDRD7Q8NHU6 1098 aaKnown RBP16.61■□□□□ 0.25
SCARB1-207ENST00000541661 VEZTQ9HBM0 779 aa16.61■□□□□ 0.25
SCARB1-207ENST00000541661 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
SCARB1-207ENST00000541661 TRIM17Q9Y577 477 aa16.61■□□□□ 0.25
SCARB1-207ENST00000541661 RBBP6Q7Z6E9 1792 aaKnown RBP16.6■□□□□ 0.25
SCARB1-207ENST00000541661 PLIN1O60240 522 aa16.6■□□□□ 0.25
SCARB1-207ENST00000541661 RBM5P52756 815 aaKnown RBP eCLIP16.6■□□□□ 0.25
SCARB1-207ENST00000541661 UBE4AQ14139 1066 aa16.6■□□□□ 0.25
SCARB1-207ENST00000541661 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
SCARB1-207ENST00000541661 OTUD7BQ6GQQ9 843 aa16.6■□□□□ 0.25
SCARB1-207ENST00000541661 ERO1AQ96HE7 468 aa16.6■□□□□ 0.25
SCARB1-207ENST00000541661 SERPINA10Q9UK55 444 aa16.6■□□□□ 0.25
SCARB1-207ENST00000541661 JAG2Q9Y219 1238 aa16.6■□□□□ 0.25
SCARB1-207ENST00000541661 OTOFQ9HC10 1997 aa16.6■□□□□ 0.25
SCARB1-207ENST00000541661 ARAP2Q8WZ64 1704 aa16.59■□□□□ 0.25
SCARB1-207ENST00000541661 CRHR2Q13324 411 aa16.59■□□□□ 0.25
SCARB1-207ENST00000541661 TNFAIP1Q13829 316 aa16.59■□□□□ 0.25
SCARB1-207ENST00000541661 TAF7LQ5H9L4 462 aa16.59■□□□□ 0.25
SCARB1-207ENST00000541661 FAM84BQ96KN1 310 aaPredicted RBP16.59■□□□□ 0.25
SCARB1-207ENST00000541661 PTPN18Q99952 460 aa16.59■□□□□ 0.25
SCARB1-207ENST00000541661 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.59■□□□□ 0.25
SCARB1-207ENST00000541661 ZNF70Q9UC06 446 aaPredicted RBP16.59■□□□□ 0.25
SCARB1-207ENST00000541661 PTPN22Q9Y2R2 807 aa16.59■□□□□ 0.25
SCARB1-207ENST00000541661 CENPFP49454 3210 aa16.59■□□□□ 0.25
SCARB1-207ENST00000541661 ALDH1L1O75891 902 aa16.58■□□□□ 0.24
SCARB1-207ENST00000541661 MFSD14BQ5SR56 506 aa16.58■□□□□ 0.24
SCARB1-207ENST00000541661 TEPSINQ96N21 525 aa16.58■□□□□ 0.24
SCARB1-207ENST00000541661 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
SCARB1-207ENST00000541661 TTF2Q9UNY4 1162 aaKnown RBP16.58■□□□□ 0.24
SCARB1-207ENST00000541661 HIBADHP31937 336 aaKnown RBP16.57■□□□□ 0.24
SCARB1-207ENST00000541661 CD99L2Q8TCZ2 262 aa16.57■□□□□ 0.24
SCARB1-207ENST00000541661 MS4A4AQ96JQ5 239 aa16.57■□□□□ 0.24
SCARB1-207ENST00000541661 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
SCARB1-207ENST00000541661 MKI67P46013 3256 aaKnown RBP16.57■□□□□ 0.24
SCARB1-207ENST00000541661 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
SCARB1-207ENST00000541661 GYG1P46976 350 aa16.56■□□□□ 0.24
SCARB1-207ENST00000541661 SP3Q02447 781 aa16.56■□□□□ 0.24
SCARB1-207ENST00000541661 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-207ENST00000541661 DZIP1LQ8IYY4 767 aaKnown RBP16.56■□□□□ 0.24
SCARB1-207ENST00000541661 ARMC5Q96C12 935 aa16.56■□□□□ 0.24
SCARB1-207ENST00000541661 GCC1Q96CN9 775 aa16.56■□□□□ 0.24
SCARB1-207ENST00000541661 OPTNQ96CV9 577 aa16.56■□□□□ 0.24
SCARB1-207ENST00000541661 KAZALD1Q96I82 304 aa16.56■□□□□ 0.24
SCARB1-207ENST00000541661 SRCIN1Q9C0H9 1055 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms