RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 SH3TC1Q8TE82 1336 aa20.02■□□□□ 0.8
EPB41L3-204ENST00000540638 BECN2A8MW95 431 aa20.02■□□□□ 0.8
EPB41L3-204ENST00000540638 PDIA3P30101 505 aaKnown RBP20.02■□□□□ 0.8
EPB41L3-204ENST00000540638 CTDSPL2Q05D32 466 aa20.02■□□□□ 0.8
EPB41L3-204ENST00000540638 CCAR1Q8IX12 1150 aaKnown RBP20.02■□□□□ 0.8
EPB41L3-204ENST00000540638 NSUN7Q8NE18 718 aaKnown RBP20.02■□□□□ 0.8
EPB41L3-204ENST00000540638 KINO60870 393 aaKnown RBP20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 CIAO1O76071 339 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 PIBF1Q8WXW3 757 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 PHKBQ93100 1093 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 UTP14AQ9BVJ6 771 aaKnown RBP20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 MBD4O95243 580 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 PDE8BO95263 885 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 SLC5A1P13866 664 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 GOLGA6L19H0YKK7 550 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 TYRO3Q06418 890 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 USPL1Q5W0Q7 1092 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 KCNB2Q92953 911 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 USP28Q96RU2 1077 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 C5P01031 1676 aa20.01■□□□□ 0.79
EPB41L3-204ENST00000540638 LOC102724428A0A0B4J2F2 783 aa20■□□□□ 0.79
EPB41L3-204ENST00000540638 BIN1O00499 593 aa20■□□□□ 0.79
EPB41L3-204ENST00000540638 ADD1P35611 737 aaKnown RBP20■□□□□ 0.79
EPB41L3-204ENST00000540638 SIK1P57059 783 aa20■□□□□ 0.79
EPB41L3-204ENST00000540638 CHAF1AQ13111 956 aaPredicted RBP20■□□□□ 0.79
EPB41L3-204ENST00000540638 AIFM3Q96NN9 605 aa20■□□□□ 0.79
EPB41L3-204ENST00000540638 GPR108Q9NPR9 543 aa20■□□□□ 0.79
EPB41L3-204ENST00000540638 CCDC87Q9NVE4 849 aa20■□□□□ 0.79
EPB41L3-204ENST00000540638 ZFYP08048 801 aaPredicted RBP20■□□□□ 0.79
EPB41L3-204ENST00000540638 HMGN5P82970 282 aaKnown RBP20■□□□□ 0.79
EPB41L3-204ENST00000540638 FSIP1Q8NA03 581 aa20■□□□□ 0.79
EPB41L3-204ENST00000540638 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20■□□□□ 0.79
EPB41L3-204ENST00000540638 ZSCAN25Q6NSZ9 544 aa20■□□□□ 0.79
EPB41L3-204ENST00000540638 MARCKSP29966 332 aaPredicted RBP19.99■□□□□ 0.79
EPB41L3-204ENST00000540638 MAP3K12Q12852 859 aa19.99■□□□□ 0.79
EPB41L3-204ENST00000540638 CMTR1Q8N1G2 835 aaKnown RBP19.99■□□□□ 0.79
EPB41L3-204ENST00000540638 ZKSCAN5Q9Y2L8 839 aa19.99■□□□□ 0.79
EPB41L3-204ENST00000540638 RIPOR2Q9Y4F9 1068 aa19.99■□□□□ 0.79
EPB41L3-204ENST00000540638 IFIT3O14879 490 aaKnown RBP19.98■□□□□ 0.79
EPB41L3-204ENST00000540638 PFKFB2O60825 505 aa19.98■□□□□ 0.79
EPB41L3-204ENST00000540638 UBN2Q6ZU65 1347 aa19.98■□□□□ 0.79
EPB41L3-204ENST00000540638 A0A1B0GVL5 298 aa19.98■□□□□ 0.79
EPB41L3-204ENST00000540638 PRKAB2O43741 272 aa19.98■□□□□ 0.79
EPB41L3-204ENST00000540638 PDE6AP16499 860 aa19.98■□□□□ 0.79
EPB41L3-204ENST00000540638 CPLX2Q6PUV4 134 aaKnown RBP19.98■□□□□ 0.79
EPB41L3-204ENST00000540638 FAM13BQ9NYF5 915 aa19.98■□□□□ 0.79
EPB41L3-204ENST00000540638 TMEM67Q5HYA8 995 aa19.98■□□□□ 0.79
EPB41L3-204ENST00000540638 ZNF396Q96N95 335 aaPredicted RBP19.98■□□□□ 0.79
EPB41L3-204ENST00000540638 DHX16O60231 1041 aaKnown RBP19.97■□□□□ 0.79
EPB41L3-204ENST00000540638 ZNF165P49910 485 aa19.97■□□□□ 0.79
EPB41L3-204ENST00000540638 PGBD1Q96JS3 809 aa19.97■□□□□ 0.79
EPB41L3-204ENST00000540638 WTIPA6NIX2 430 aaPredicted RBP19.97■□□□□ 0.79
EPB41L3-204ENST00000540638 METAP2P50579 478 aaKnown RBP eCLIP19.97■□□□□ 0.79
EPB41L3-204ENST00000540638 PUM3Q15397 648 aaKnown RBP19.97■□□□□ 0.79
EPB41L3-204ENST00000540638 GYG1P46976 350 aa19.97■□□□□ 0.79
EPB41L3-204ENST00000540638 TRIM29Q14134 588 aa19.96■□□□□ 0.79
EPB41L3-204ENST00000540638 SPATA5Q8NB90 893 aa19.96■□□□□ 0.79
EPB41L3-204ENST00000540638 SLC4A4Q9Y6R1 1079 aa19.96■□□□□ 0.79
EPB41L3-204ENST00000540638 CTDNEP1O95476 244 aa19.96■□□□□ 0.79
EPB41L3-204ENST00000540638 CCDC152Q4G0S7 254 aa19.96■□□□□ 0.79
EPB41L3-204ENST00000540638 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
EPB41L3-204ENST00000540638 TMEM87AQ8NBN3 555 aa19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 IL17RAQ96F46 866 aa19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 ZSCAN16Q9H4T2 348 aaPredicted RBP19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 NOL7Q9UMY1 257 aaKnown RBP19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 ALS2Q96Q42 1657 aa19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 CCDC69A6NI79 296 aa19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 IL6STP40189 918 aaPredicted RBP19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 RESTQ13127 1097 aa19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 RASGRF1Q13972 1273 aa19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 TTF1Q15361 905 aaPredicted RBP19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 LPIN2Q92539 896 aa19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 PRDM1O75626 825 aa19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 TSGA10IPQ3SY00 556 aa19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 SLC26A6Q9BXS9 759 aa19.95■□□□□ 0.78
EPB41L3-204ENST00000540638 GOLGA8AA7E2F4 631 aa19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 CSF1RP07333 972 aa19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 CYP7A1P22680 504 aa19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 SDR42E1Q8WUS8 393 aa19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 STRCP1A6NGW2 1772 aa19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 SCN11AQ9UI33 1791 aa19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 SENP2Q9HC62 589 aa19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 DDX19AQ9NUU7 478 aaKnown RBP19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 TRIM28Q13263 835 aaKnown RBP19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 ITPK1Q13572 414 aa19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 TBC1D10CQ8IV04 446 aa19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 MARCH10Q8NA82 808 aaPredicted RBP19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 ALG1Q9BT22 464 aa19.94■□□□□ 0.78
EPB41L3-204ENST00000540638 hCG_1642624A0A1W2PR95 340 aa19.93■□□□□ 0.78
EPB41L3-204ENST00000540638 ERICH2A1L162 156 aa19.93■□□□□ 0.78
EPB41L3-204ENST00000540638 ADD2P35612 726 aa19.93■□□□□ 0.78
EPB41L3-204ENST00000540638 FILIP1Q7Z7B0 1213 aa19.93■□□□□ 0.78
EPB41L3-204ENST00000540638 AFDNP55196 1824 aaKnown RBP19.93■□□□□ 0.78
EPB41L3-204ENST00000540638 UQCRFS1P1P0C7P4 283 aa19.92■□□□□ 0.78
EPB41L3-204ENST00000540638 FAM200AQ8TCP9 573 aa19.92■□□□□ 0.78
EPB41L3-204ENST00000540638 SLC12A7Q9Y666 1083 aa19.92■□□□□ 0.78
EPB41L3-204ENST00000540638 USP54Q70EL1 1684 aa19.92■□□□□ 0.78
EPB41L3-204ENST00000540638 PALLDQ8WX93 1383 aa19.92■□□□□ 0.78
EPB41L3-204ENST00000540638 EXOSC10Q01780 885 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms