RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PREPP48147 710 aa9.54□□□□□ -0.88
VBP1-203ENST00000535916 C19orf57Q0VDD7 668 aa9.54□□□□□ -0.88
VBP1-203ENST00000535916 ZNF211Q13398 564 aaPredicted RBP9.54□□□□□ -0.88
VBP1-203ENST00000535916 SF3B2Q13435 895 aaKnown RBP9.54□□□□□ -0.88
VBP1-203ENST00000535916 VN1R5Q7Z5H4 357 aa9.54□□□□□ -0.88
VBP1-203ENST00000535916 BSNDQ8WZ55 320 aa9.54□□□□□ -0.88
VBP1-203ENST00000535916 RUSC1Q9BVN2 902 aa9.54□□□□□ -0.88
VBP1-203ENST00000535916 LATS2Q9NRM7 1088 aa9.54□□□□□ -0.88
VBP1-203ENST00000535916 CCDC87Q9NVE4 849 aa9.54□□□□□ -0.88
VBP1-203ENST00000535916 MTMR7Q9Y216 660 aa9.54□□□□□ -0.88
VBP1-203ENST00000535916 EDN3P14138 238 aa9.53□□□□□ -0.88
VBP1-203ENST00000535916 USP5P45974 858 aa9.53□□□□□ -0.88
VBP1-203ENST00000535916 CD97P48960 835 aa9.53□□□□□ -0.88
VBP1-203ENST00000535916 FKBP4Q02790 459 aaKnown RBP eCLIP9.53□□□□□ -0.88
VBP1-203ENST00000535916 EHHADHQ08426 723 aa9.53□□□□□ -0.88
VBP1-203ENST00000535916 ANKRD34AQ69YU3 496 aa9.53□□□□□ -0.88
VBP1-203ENST00000535916 ZDHHC13Q8IUH4 622 aa9.53□□□□□ -0.88
VBP1-203ENST00000535916 RNF208Q9H0X6 261 aa9.53□□□□□ -0.88
VBP1-203ENST00000535916 SOX1O00570 391 aaPredicted RBP9.52□□□□□ -0.89
VBP1-203ENST00000535916 SART1O43290 800 aaKnown RBP9.52□□□□□ -0.89
VBP1-203ENST00000535916 ARL4DP49703 201 aa9.52□□□□□ -0.89
VBP1-203ENST00000535916 NFIAQ12857 509 aa9.52□□□□□ -0.89
VBP1-203ENST00000535916 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.52□□□□□ -0.89
VBP1-203ENST00000535916 FAM20CQ8IXL6 584 aa9.52□□□□□ -0.89
VBP1-203ENST00000535916 GJD3Q8N144 294 aa9.52□□□□□ -0.89
VBP1-203ENST00000535916 MED26O95402 600 aa9.51□□□□□ -0.89
VBP1-203ENST00000535916 BMP3P12645 472 aa9.51□□□□□ -0.89
VBP1-203ENST00000535916 IKBKEQ14164 716 aa9.51□□□□□ -0.89
VBP1-203ENST00000535916 PEAR1Q5VY43 1037 aaPredicted RBP9.51□□□□□ -0.89
VBP1-203ENST00000535916 RNF43Q68DV7 783 aa9.51□□□□□ -0.89
VBP1-203ENST00000535916 ASAP3Q8TDY4 903 aa9.51□□□□□ -0.89
VBP1-203ENST00000535916 BHLHE41Q9C0J9 482 aaPredicted RBP9.51□□□□□ -0.89
VBP1-203ENST00000535916 FDX2Q6P4F2 183 aa9.5□□□□□ -0.89
VBP1-203ENST00000535916 AMOTL2Q9Y2J4 779 aa9.5□□□□□ -0.89
VBP1-203ENST00000535916 BEND4Q6ZU67 534 aa9.49□□□□□ -0.89
VBP1-203ENST00000535916 CLEC10AQ8IUN9 316 aa9.49□□□□□ -0.89
VBP1-203ENST00000535916 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
VBP1-203ENST00000535916 USP26Q9BXU7 913 aa9.49□□□□□ -0.89
VBP1-203ENST00000535916 KCNF1Q9H3M0 494 aa9.49□□□□□ -0.89
VBP1-203ENST00000535916 ZFYVE28Q9HCC9 887 aa9.49□□□□□ -0.89
VBP1-203ENST00000535916 POLR3DP05423 398 aaPredicted RBP9.48□□□□□ -0.89
VBP1-203ENST00000535916 FAM83CQ9BQN1 747 aa9.48□□□□□ -0.89
VBP1-203ENST00000535916 MEGF11A6BM72 1044 aa9.47□□□□□ -0.89
VBP1-203ENST00000535916 METTL12A8MUP2 240 aa9.47□□□□□ -0.89
VBP1-203ENST00000535916 KIAA1324LA8MWY0 1029 aaPredicted RBP9.47□□□□□ -0.89
VBP1-203ENST00000535916 LOC100289279A0A1B0GTE1 492 aa9.46□□□□□ -0.9
VBP1-203ENST00000535916 GAS2O43903 313 aaKnown RBP9.46□□□□□ -0.9
VBP1-203ENST00000535916 DLGAP3O95886 979 aa9.46□□□□□ -0.9
VBP1-203ENST00000535916 ESRRAP11474 423 aaPredicted RBP9.46□□□□□ -0.9
VBP1-203ENST00000535916 TMPRSS13Q9BYE2 586 aa9.46□□□□□ -0.9
VBP1-203ENST00000535916 SOX17Q9H6I2 414 aaPredicted RBP9.46□□□□□ -0.9
VBP1-203ENST00000535916 HIF3AQ9Y2N7 669 aa9.46□□□□□ -0.9
VBP1-203ENST00000535916 PRR19A6NJB7 356 aa9.45□□□□□ -0.9
VBP1-203ENST00000535916 SGO2Q562F6 1265 aa9.45□□□□□ -0.9
VBP1-203ENST00000535916 C14orf37Q86TY3 774 aa9.45□□□□□ -0.9
VBP1-203ENST00000535916 SHKBP1Q8TBC3 707 aa9.45□□□□□ -0.9
VBP1-203ENST00000535916 ICMTO60725 284 aa9.44□□□□□ -0.9
VBP1-203ENST00000535916 MAP4P27816 1152 aaKnown RBP9.44□□□□□ -0.9
VBP1-203ENST00000535916 NUTM2GQ5VZR2 741 aa9.44□□□□□ -0.9
VBP1-203ENST00000535916 C12orf50Q8NA57 414 aaPredicted RBP9.44□□□□□ -0.9
VBP1-203ENST00000535916 EGFL7Q9UHF1 273 aa9.44□□□□□ -0.9
VBP1-203ENST00000535916 USTQ9Y2C2 406 aa9.44□□□□□ -0.9
VBP1-203ENST00000535916 SERPINB4P48594 390 aa9.43□□□□□ -0.9
VBP1-203ENST00000535916 GSTM4Q03013 218 aa9.43□□□□□ -0.9
VBP1-203ENST00000535916 SMG8Q8ND04 991 aaKnown RBP9.43□□□□□ -0.9
VBP1-203ENST00000535916 A0A1W2PP55 124 aa9.42□□□□□ -0.9
VBP1-203ENST00000535916 H3BRB1 525 aa9.42□□□□□ -0.9
VBP1-203ENST00000535916 TIAF1O95411 115 aa9.42□□□□□ -0.9
VBP1-203ENST00000535916 SPINK2P20155 84 aa9.42□□□□□ -0.9
VBP1-203ENST00000535916 GRIK1P39086 918 aa9.42□□□□□ -0.9
VBP1-203ENST00000535916 ECM1Q16610 540 aa9.42□□□□□ -0.9
VBP1-203ENST00000535916 MCTP1Q6DN14 999 aa9.42□□□□□ -0.9
VBP1-203ENST00000535916 GALNT12Q8IXK2 581 aa9.42□□□□□ -0.9
VBP1-203ENST00000535916 TUT1Q9H6E5 874 aaKnown RBP9.42□□□□□ -0.9
VBP1-203ENST00000535916 SUGCTQ9HAC7 445 aa9.42□□□□□ -0.9
VBP1-203ENST00000535916 ADAMTS4O75173 837 aa9.41□□□□□ -0.9
VBP1-203ENST00000535916 USPL1Q5W0Q7 1092 aa9.41□□□□□ -0.9
VBP1-203ENST00000535916 INTS5Q6P9B9 1019 aaKnown RBP9.41□□□□□ -0.9
VBP1-203ENST00000535916 CCNJLQ8IV13 435 aa9.41□□□□□ -0.9
VBP1-203ENST00000535916 MFSD14AQ96MC6 490 aa9.41□□□□□ -0.9
VBP1-203ENST00000535916 CYP4F12Q9HCS2 524 aa9.41□□□□□ -0.9
VBP1-203ENST00000535916 BRPF3Q9ULD4 1205 aa9.41□□□□□ -0.9
VBP1-203ENST00000535916 A0A096LPE4 126 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 A0A1W2PPZ6 126 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 WDR64B1ANS9 1081 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 DRD2P14416 443 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 YBX3P16989 372 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■□□□□ 9.5
VBP1-203ENST00000535916 RXRBP28702 533 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 GRIA4P48058 902 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 PCDH1Q08174 1060 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 SPRED3Q2MJR0 410 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 B4GALNT3Q6L9W6 998 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 GLYCTKQ8IVS8 523 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 TCF12Q99081 682 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 NRSN2Q9GZP1 204 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 LIN7BQ9HAP6 207 aa9.4□□□□□ -0.9
VBP1-203ENST00000535916 OAS3Q9Y6K5 1087 aaKnown RBP9.4□□□□□ -0.9
VBP1-203ENST00000535916 ZNF423Q2M1K9 1284 aa9.39□□□□□ -0.91
VBP1-203ENST00000535916 EXOSC6Q5RKV6 272 aaKnown RBP9.39□□□□□ -0.91
VBP1-203ENST00000535916 GP2P55259 537 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms