RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 KIF23Q02241 960 aaPredicted RBP20.35■□□□□ 0.85
CLSTN3-204ENST00000535313 TTLL12Q14166 644 aaPredicted RBP20.35■□□□□ 0.85
CLSTN3-204ENST00000535313 CERS5Q8N5B7 392 aa20.35■□□□□ 0.85
CLSTN3-204ENST00000535313 PUS3Q9BZE2 481 aaKnown RBP20.35■□□□□ 0.85
CLSTN3-204ENST00000535313 PAPPA2Q9BXP8 1791 aa20.35■□□□□ 0.85
CLSTN3-204ENST00000535313 F8W031 263 aaPredicted RBP20.34■□□□□ 0.85
CLSTN3-204ENST00000535313 TRMT2AQ8IZ69 625 aaKnown RBP20.34■□□□□ 0.85
CLSTN3-204ENST00000535313 ANKRD44Q8N8A2 993 aa20.34■□□□□ 0.85
CLSTN3-204ENST00000535313 ZBED3Q96IU2 234 aaPredicted RBP20.34■□□□□ 0.85
CLSTN3-204ENST00000535313 JAG2Q9Y219 1238 aa20.34■□□□□ 0.85
CLSTN3-204ENST00000535313 RIPOR2Q9Y4F9 1068 aa20.34■□□□□ 0.85
CLSTN3-204ENST00000535313 CT47B1P0C2W7 299 aaPredicted RBP20.33■□□□□ 0.85
CLSTN3-204ENST00000535313 HIBADHP31937 336 aaKnown RBP20.33■□□□□ 0.85
CLSTN3-204ENST00000535313 USP44Q9H0E7 712 aa20.33■□□□□ 0.85
CLSTN3-204ENST00000535313 UBE2Q2LH0YL09 131 aa20.32■□□□□ 0.84
CLSTN3-204ENST00000535313 MYO1BO43795 1136 aa20.32■□□□□ 0.84
CLSTN3-204ENST00000535313 GYG1P46976 350 aa20.32■□□□□ 0.84
CLSTN3-204ENST00000535313 METTL24Q5JXM2 366 aa20.32■□□□□ 0.84
CLSTN3-204ENST00000535313 MOB2Q70IA6 237 aa20.32■□□□□ 0.84
CLSTN3-204ENST00000535313 RASAL3Q86YV0 1011 aa20.32■□□□□ 0.84
CLSTN3-204ENST00000535313 REM2Q8IYK8 340 aaPredicted RBP20.32■□□□□ 0.84
CLSTN3-204ENST00000535313 MTMR14Q8NCE2 650 aa20.32■□□□□ 0.84
CLSTN3-204ENST00000535313 CFAP100Q494V2 611 aa20.31■□□□□ 0.84
CLSTN3-204ENST00000535313 VPS37DQ86XT2 251 aa20.31■□□□□ 0.84
CLSTN3-204ENST00000535313 TDRD7Q8NHU6 1098 aaKnown RBP20.31■□□□□ 0.84
CLSTN3-204ENST00000535313 FAM84BQ96KN1 310 aaPredicted RBP20.31■□□□□ 0.84
CLSTN3-204ENST00000535313 SAGE1Q9NXZ1 904 aa20.31■□□□□ 0.84
CLSTN3-204ENST00000535313 FAM205AQ6ZU69 1335 aa20.3■□□□□ 0.84
CLSTN3-204ENST00000535313 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
CLSTN3-204ENST00000535313 LRRC24Q50LG9 513 aa20.3■□□□□ 0.84
CLSTN3-204ENST00000535313 MFSD14BQ5SR56 506 aa20.3■□□□□ 0.84
CLSTN3-204ENST00000535313 ARMC9Q7Z3E5 817 aa20.3■□□□□ 0.84
CLSTN3-204ENST00000535313 ABHD8Q96I13 439 aa20.3■□□□□ 0.84
CLSTN3-204ENST00000535313 CSRNP1Q96S65 589 aa20.3■□□□□ 0.84
CLSTN3-204ENST00000535313 CAVIN4Q5BKX8 364 aa20.29■□□□□ 0.84
CLSTN3-204ENST00000535313 DEFB129Q9H1M3 183 aa20.29■□□□□ 0.84
CLSTN3-204ENST00000535313 RNF186Q9NXI6 227 aa20.29■□□□□ 0.84
CLSTN3-204ENST00000535313 COL1A1P02452 1464 aaPredicted RBP20.29■□□□□ 0.84
CLSTN3-204ENST00000535313 SPDYE2BA6NHP3 402 aa20.28■□□□□ 0.84
CLSTN3-204ENST00000535313 TRPA1O75762 1119 aa20.28■□□□□ 0.84
CLSTN3-204ENST00000535313 PDE8BO95263 885 aa20.28■□□□□ 0.84
CLSTN3-204ENST00000535313 SPDYE6P0CI01 402 aa20.28■□□□□ 0.84
CLSTN3-204ENST00000535313 API5Q9BZZ5 524 aaKnown RBP20.28■□□□□ 0.84
CLSTN3-204ENST00000535313 NOB1Q9ULX3 412 aaKnown RBP20.28■□□□□ 0.84
CLSTN3-204ENST00000535313 PPP2R3BQ9Y5P8 575 aa20.28■□□□□ 0.84
CLSTN3-204ENST00000535313 CLRN2A0PK11 232 aa20.27■□□□□ 0.84
CLSTN3-204ENST00000535313 FRAT2O75474 233 aaPredicted RBP20.27■□□□□ 0.84
CLSTN3-204ENST00000535313 PRKG1Q13976 671 aa20.27■□□□□ 0.84
CLSTN3-204ENST00000535313 KLHDC4Q8TBB5 520 aa20.27■□□□□ 0.84
CLSTN3-204ENST00000535313 PRMT6Q96LA8 375 aaPredicted RBP20.27■□□□□ 0.84
CLSTN3-204ENST00000535313 VEZTQ9HBM0 779 aa20.27■□□□□ 0.84
CLSTN3-204ENST00000535313 TTF2Q9UNY4 1162 aaKnown RBP20.27■□□□□ 0.84
CLSTN3-204ENST00000535313 PCDHAC2Q9Y5I4 1007 aa20.27■□□□□ 0.84
CLSTN3-204ENST00000535313 CASP8AP2Q9UKL3 1982 aa20.26■□□□□ 0.83
CLSTN3-204ENST00000535313 UBTFL1P0CB47 393 aaPredicted RBP20.26■□□□□ 0.83
CLSTN3-204ENST00000535313 FBXO33Q7Z6M2 555 aa20.26■□□□□ 0.83
CLSTN3-204ENST00000535313 VGLL2Q8N8G2 317 aa20.26■□□□□ 0.83
CLSTN3-204ENST00000535313 SERPINA10Q9UK55 444 aa20.26■□□□□ 0.83
CLSTN3-204ENST00000535313 HDAC5Q9UQL6 1122 aa20.26■□□□□ 0.83
CLSTN3-204ENST00000535313 SUPT20HL1Q3ZLR7 823 aa20.25■□□□□ 0.83
CLSTN3-204ENST00000535313 ANGEL1Q9UNK9 670 aaKnown RBP20.25■□□□□ 0.83
CLSTN3-204ENST00000535313 AKAP11Q9UKA4 1901 aa20.25■□□□□ 0.83
CLSTN3-204ENST00000535313 IFIT1P09914 478 aaKnown RBP20.24■□□□□ 0.83
CLSTN3-204ENST00000535313 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
CLSTN3-204ENST00000535313 CHAF1AQ13111 956 aaPredicted RBP20.24■□□□□ 0.83
CLSTN3-204ENST00000535313 PUM3Q15397 648 aaKnown RBP20.24■□□□□ 0.83
CLSTN3-204ENST00000535313 TBC1D22AQ8WUA7 517 aa20.24■□□□□ 0.83
CLSTN3-204ENST00000535313 IQSEC3Q9UPP2 1182 aaPredicted RBP20.24■□□□□ 0.83
CLSTN3-204ENST00000535313 EYA2O00167 538 aa20.23■□□□□ 0.83
CLSTN3-204ENST00000535313 PPP1R12BO60237 982 aaPredicted RBP20.23■□□□□ 0.83
CLSTN3-204ENST00000535313 RARSP54136 660 aaKnown RBP20.23■□□□□ 0.83
CLSTN3-204ENST00000535313 DGKZQ13574 1117 aa20.23■□□□□ 0.83
CLSTN3-204ENST00000535313 TNFAIP1Q13829 316 aa20.23■□□□□ 0.83
CLSTN3-204ENST00000535313 MCOLN1Q9GZU1 580 aa20.23■□□□□ 0.83
CLSTN3-204ENST00000535313 CCDC85CA6NKD9 419 aa20.22■□□□□ 0.83
CLSTN3-204ENST00000535313 RFX5P48382 616 aaPredicted RBP20.22■□□□□ 0.83
CLSTN3-204ENST00000535313 MKRN3Q13064 507 aaKnown RBP20.22■□□□□ 0.83
CLSTN3-204ENST00000535313 LDLRAD1Q5T700 205 aa20.22■□□□□ 0.83
CLSTN3-204ENST00000535313 ECM29Q5VYK3 1845 aa20.22■□□□□ 0.83
CLSTN3-204ENST00000535313 KIF16BQ96L93 1317 aa20.22■□□□□ 0.83
CLSTN3-204ENST00000535313 SLC5A1P13866 664 aa20.21■□□□□ 0.83
CLSTN3-204ENST00000535313 CRKP46108 304 aa20.21■□□□□ 0.83
CLSTN3-204ENST00000535313 BCAMP50895 628 aa20.21■□□□□ 0.83
CLSTN3-204ENST00000535313 RASA3Q14644 834 aa20.21■□□□□ 0.83
CLSTN3-204ENST00000535313 SPDYE2Q495Y8 402 aa20.21■□□□□ 0.83
CLSTN3-204ENST00000535313 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
CLSTN3-204ENST00000535313 ZNF70Q9UC06 446 aaPredicted RBP20.21■□□□□ 0.83
CLSTN3-204ENST00000535313 AOX1Q06278 1338 aa20.21■□□□□ 0.83
CLSTN3-204ENST00000535313 FGFR2P21802 821 aa20.2■□□□□ 0.82
CLSTN3-204ENST00000535313 SREBF2Q12772 1141 aa20.2■□□□□ 0.82
CLSTN3-204ENST00000535313 MAP3K11Q16584 847 aa20.2■□□□□ 0.82
CLSTN3-204ENST00000535313 LPIN2Q92539 896 aa20.2■□□□□ 0.82
CLSTN3-204ENST00000535313 ARHGAP45Q92619 1136 aa20.2■□□□□ 0.82
CLSTN3-204ENST00000535313 SLC10A4Q96EP9 437 aa20.2■□□□□ 0.82
CLSTN3-204ENST00000535313 TDRD3Q9H7E2 651 aaKnown RBP20.2■□□□□ 0.82
CLSTN3-204ENST00000535313 FBXO3Q9UK99 471 aa20.2■□□□□ 0.82
CLSTN3-204ENST00000535313 FZD1Q9UP38 647 aa20.2■□□□□ 0.82
CLSTN3-204ENST00000535313 TM4SF4P48230 202 aa20.19■□□□□ 0.82
CLSTN3-204ENST00000535313 NBPF12Q5TAG4 269 aaPredicted RBP20.19■□□□□ 0.82
CLSTN3-204ENST00000535313 SPRYD7Q5W111 196 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 282.3 ms