RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PRSS36Q5K4E3 855 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 HP1BP3Q5SSJ5 553 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-219ENST00000534049 ADAMTSL4Q6UY14 1074 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 PRR23CQ6ZRP0 262 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 VN1R5Q7Z5H4 357 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 CCNJLQ8IV13 435 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 DDX54Q8TDD1 881 aaKnown RBP7.25□□□□□ -1.25
ITGB1-219ENST00000534049 SLC7A3Q8WY07 619 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 KLHDC7BQ96G42 594 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 HHIPQ96QV1 700 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 ZFYVE1Q9HBF4 777 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 BIN2Q9UBW5 565 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-219ENST00000534049 DCTN4Q9UJW0 460 aa7.25□□□□□ -1.25
ITGB1-219ENST00000534049 A0A1W2PP55 124 aa7.24□□□□□ -1.25
ITGB1-219ENST00000534049 DHX15O43143 795 aaKnown RBP7.24□□□□□ -1.25
ITGB1-219ENST00000534049 TRPA1O75762 1119 aa7.24□□□□□ -1.25
ITGB1-219ENST00000534049 ALX3O95076 343 aa7.24□□□□□ -1.25
ITGB1-219ENST00000534049 ZMYM1Q5SVZ6 1142 aa7.24□□□□□ -1.25
ITGB1-219ENST00000534049 FOXD4L4Q8WXT5 416 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-219ENST00000534049 LIN7BQ9HAP6 207 aa7.24□□□□□ -1.25
ITGB1-219ENST00000534049 LATS2Q9NRM7 1088 aa7.24□□□□□ -1.25
ITGB1-219ENST00000534049 KCNK4Q9NYG8 393 aa7.24□□□□□ -1.25
ITGB1-219ENST00000534049 MEGF11A6BM72 1044 aa7.23□□□□□ -1.25
ITGB1-219ENST00000534049 ADAM11O75078 769 aa7.23□□□□□ -1.25
ITGB1-219ENST00000534049 WISP1O95388 367 aa7.23□□□□□ -1.25
ITGB1-219ENST00000534049 POLR3DP05423 398 aaPredicted RBP7.23□□□□□ -1.25
ITGB1-219ENST00000534049 ITGB7P26010 798 aa7.23□□□□□ -1.25
ITGB1-219ENST00000534049 PTPN12Q05209 780 aaKnown RBP7.23□□□□□ -1.25
ITGB1-219ENST00000534049 KIAA1211Q6ZU35 1233 aa7.23□□□□□ -1.25
ITGB1-219ENST00000534049 AGGF1Q8N302 714 aaeCLIP7.23□□□□□ -1.25
ITGB1-219ENST00000534049 RUSC1Q9BVN2 902 aa7.23□□□□□ -1.25
ITGB1-219ENST00000534049 CLEC4MQ9H2X3 399 aaPredicted RBP7.23□□□□□ -1.25
ITGB1-219ENST00000534049 TRAK1Q9UPV9 953 aa7.23□□□□□ -1.25
ITGB1-219ENST00000534049 A0A096LPE4 126 aa7.22□□□□□ -1.25
ITGB1-219ENST00000534049 A0A1W2PPZ6 126 aa7.22□□□□□ -1.25
ITGB1-219ENST00000534049 SOX1O00570 391 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-219ENST00000534049 EIF1AYO14602 144 aaKnown RBP7.22□□□□□ -1.25
ITGB1-219ENST00000534049 GPR182O15218 404 aa7.22□□□□□ -1.25
ITGB1-219ENST00000534049 SART1O43290 800 aaKnown RBP7.22□□□□□ -1.25
ITGB1-219ENST00000534049 ESRRAP11474 423 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-219ENST00000534049 NLRP12P59046 1061 aa7.22□□□□□ -1.25
ITGB1-219ENST00000534049 FDX2Q6P4F2 183 aa7.22□□□□□ -1.25
ITGB1-219ENST00000534049 EHD4Q9H223 541 aa7.22□□□□□ -1.25
ITGB1-219ENST00000534049 HIF3AQ9Y2N7 669 aa7.22□□□□□ -1.25
ITGB1-219ENST00000534049 IGHA2P01877 340 aa7.21□□□□□ -1.26
ITGB1-219ENST00000534049 HNRNPUQ00839 825 aaKnown RBP eCLIP7.21□□□□□ -1.26
ITGB1-219ENST00000534049 ORC1Q13415 861 aa7.21□□□□□ -1.26
ITGB1-219ENST00000534049 UBASH3BQ8TF42 649 aa7.21□□□□□ -1.26
ITGB1-219ENST00000534049 UTP4Q969X6 686 aaKnown RBP7.21□□□□□ -1.26
ITGB1-219ENST00000534049 FAM46AQ96IP4 442 aaKnown RBP7.21□□□□□ -1.26
ITGB1-219ENST00000534049 CSRNP1Q96S65 589 aa7.21□□□□□ -1.26
ITGB1-219ENST00000534049 TCF12Q99081 682 aa7.21□□□□□ -1.26
ITGB1-219ENST00000534049 TRAIPQ9BWF2 469 aa7.21□□□□□ -1.26
ITGB1-219ENST00000534049 NIF3L1Q9GZT8 377 aa7.21□□□□□ -1.26
ITGB1-219ENST00000534049 RAXQ9Y2V3 346 aa7.21□□□□□ -1.26
ITGB1-219ENST00000534049 DDX3YO15523 660 aaKnown RBP7.2□□□□□ -1.26
ITGB1-219ENST00000534049 CYP11A1P05108 521 aa7.2□□□□□ -1.26
ITGB1-219ENST00000534049 PCDH1Q08174 1060 aa7.2□□□□□ -1.26
ITGB1-219ENST00000534049 PRPF40BQ6NWY9 871 aaKnown RBP7.2□□□□□ -1.26
ITGB1-219ENST00000534049 ZSCAN29Q8IWY8 852 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-219ENST00000534049 CCDC74AQ96AQ1 378 aa7.2□□□□□ -1.26
ITGB1-219ENST00000534049 MYRFLQ96LU7 910 aa7.2□□□□□ -1.26
ITGB1-219ENST00000534049 CYP4F12Q9HCS2 524 aa7.2□□□□□ -1.26
ITGB1-219ENST00000534049 NPHS2Q9NP85 383 aa7.2□□□□□ -1.26
ITGB1-219ENST00000534049 PPP4R2Q9NY27 417 aa7.2□□□□□ -1.26
ITGB1-219ENST00000534049 ITPKAP23677 461 aa7.19□□□□□ -1.26
ITGB1-219ENST00000534049 MAPK1P28482 360 aa7.19□□□□□ -1.26
ITGB1-219ENST00000534049 RPS26P11Q5JNZ5 115 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-219ENST00000534049 NUTM2GQ5VZR2 741 aa7.19□□□□□ -1.26
ITGB1-219ENST00000534049 USPL1Q5W0Q7 1092 aa7.19□□□□□ -1.26
ITGB1-219ENST00000534049 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-219ENST00000534049 TMC7Q7Z402 723 aa7.19□□□□□ -1.26
ITGB1-219ENST00000534049 UBL7Q96S82 380 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-219ENST00000534049 USP26Q9BXU7 913 aa7.19□□□□□ -1.26
ITGB1-219ENST00000534049 SUGCTQ9HAC7 445 aa7.19□□□□□ -1.26
ITGB1-219ENST00000534049 NLRP2Q9NX02 1062 aa7.19□□□□□ -1.26
ITGB1-219ENST00000534049 STOML1Q9UBI4 398 aa7.19□□□□□ -1.26
ITGB1-219ENST00000534049 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
ITGB1-219ENST00000534049 METTL12A8MUP2 240 aa7.18□□□□□ -1.26
ITGB1-219ENST00000534049 GAS2O43903 313 aaKnown RBP7.18□□□□□ -1.26
ITGB1-219ENST00000534049 GADD45BO75293 160 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-219ENST00000534049 FSTP19883 344 aa7.18□□□□□ -1.26
ITGB1-219ENST00000534049 GRIA4P48058 902 aa7.18□□□□□ -1.26
ITGB1-219ENST00000534049 GSTM4Q03013 218 aa7.18□□□□□ -1.26
ITGB1-219ENST00000534049 SMG8Q8ND04 991 aaKnown RBP7.18□□□□□ -1.26
ITGB1-219ENST00000534049 TMPRSS13Q9BYE2 586 aa7.18□□□□□ -1.26
ITGB1-219ENST00000534049 IVNS1ABPQ9Y6Y0 642 aa7.18□□□□□ -1.26
ITGB1-219ENST00000534049 LOC100289279A0A1B0GTE1 492 aa7.17□□□□□ -1.26
ITGB1-219ENST00000534049 TREHO43280 583 aa7.17□□□□□ -1.26
ITGB1-219ENST00000534049 B3GALT4O96024 378 aa7.17□□□□□ -1.26
ITGB1-219ENST00000534049 XRCC5P13010 732 aaKnown RBP7.17□□□□□ -1.26
ITGB1-219ENST00000534049 PLCB3Q01970 1234 aa7.17□□□□□ -1.26
ITGB1-219ENST00000534049 EXOSC6Q5RKV6 272 aaKnown RBP7.17□□□□□ -1.26
ITGB1-219ENST00000534049 Q8N3U1 123 aa7.17□□□□□ -1.26
ITGB1-219ENST00000534049 ZNF576Q9H609 170 aa7.17□□□□□ -1.26
ITGB1-219ENST00000534049 RNF112Q9ULX5 631 aa7.17□□□□□ -1.26
ITGB1-219ENST00000534049 AP3B2Q13367 1082 aa7.16□□□□□ -1.26
ITGB1-219ENST00000534049 LRP8Q14114 963 aa7.16□□□□□ -1.26
ITGB1-219ENST00000534049 CLEC10AQ8IUN9 316 aa7.16□□□□□ -1.26
ITGB1-219ENST00000534049 ARMC10Q8N2F6 343 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms