RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 BBOX1O75936 387 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 KIAA0754O94854 1291 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 SLC27A3Q5K4L6 730 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 USPL1Q5W0Q7 1092 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 PRDM10Q9NQV6 1147 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 PNMA2Q9UL42 364 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 CDK12Q9NYV4 1490 aaPredicted RBP12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 UBA7P41226 1012 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 RBM8AQ9Y5S9 174 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 TULP4Q9NRJ4 1543 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 ERICH4A6NGS2 130 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 CTAGE5O15320 804 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 EIF3JO75822 258 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 GNA11P29992 359 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 AS3MTQ9HBK9 375 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 TEKT1Q969V4 418 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 XAGE2Q96GT9 111 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 NEURL1BA8MQ27 555 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 SDSP20132 328 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 PABPC4Q13310 644 aaKnown RBP eCLIP12.94□□□□□ -0.344e-7■■■■■ 37.3
AMBRA1-211ENST00000533727 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 USP37Q86T82 979 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 ESYT1Q9BSJ8 1104 aa12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 ZSCAN16Q9H4T2 348 aaPredicted RBP12.94□□□□□ -0.34
AMBRA1-211ENST00000533727 BRPF1P55201 1214 aaPredicted RBP12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 ZBTB40Q9NUA8 1239 aa12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 ZMYM4Q5VZL5 1548 aa12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 PLS1Q14651 629 aa12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 APPBP2Q92624 585 aa12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 VTI1AQ96AJ9 217 aa12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 LEMD3Q9Y2U8 911 aa12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 CSADQ9Y600 493 aa12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 ERLIN1O75477 346 aa12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 SSFA2P28290 1259 aa12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 NAPAP54920 295 aa12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 GJD4Q96KN9 370 aaPredicted RBP12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 GTPBP4Q9BZE4 634 aaKnown RBP12.93□□□□□ -0.34
AMBRA1-211ENST00000533727 MBD4O95243 580 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 SERPINB2P05120 415 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 CCT2P78371 535 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 CBX1P83916 185 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 NCBP1Q09161 790 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 G2E3Q7L622 706 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 MIGA1Q8NAN2 632 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 NCOA3Q9Y6Q9 1424 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 PALLDQ8WX93 1383 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 NMIQ13287 307 aaPredicted RBP12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 DIP2BQ9P265 1576 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 SLC5A4Q9NY91 659 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 BIN2Q9UBW5 565 aaPredicted RBP12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 ZC3H13Q5T200 1668 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 SEMA3EO15041 775 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 FKBP15Q5T1M5 1219 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 ZNF408Q9H9D4 720 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 CALCOCO1Q9P1Z2 691 aa12.92□□□□□ -0.34
AMBRA1-211ENST00000533727 PRC1O43663 620 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 TBCAO75347 108 aaKnown RBP12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 CETN2P41208 172 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 CKAP2LQ8IYA6 745 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 DCPSQ96C86 337 aaKnown RBP12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 LAMC1P11047 1609 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 XDHP47989 1333 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 CLEC4GQ6UXB4 293 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 ZNF397Q8NF99 534 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 BRF1Q92994 677 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 SPHKAPQ2M3C7 1700 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 PARP1P09874 1014 aaKnown RBP12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 SLC4A8Q2Y0W8 1093 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 SUCLG2Q96I99 432 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 ASAP1Q9ULH1 1129 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 SKIDA1Q1XH10 827 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 TTLL5Q6EMB2 1281 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 OTUD7BQ6GQQ9 843 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 HEATR3Q7Z4Q2 680 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 SULF1Q8IWU6 871 aa12.91□□□□□ -0.34
AMBRA1-211ENST00000533727 CLTCQ00610 1675 aaKnown RBP12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 PPEF1O14829 653 aaPredicted RBP12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 UBE4AQ14139 1066 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 CLTCL1P53675 1640 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 RPS6KA4O75676 772 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 MAP3K11Q16584 847 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 VPS36Q86VN1 386 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 IBTKQ9P2D0 1353 aaPredicted RBP12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 HEG1Q9ULI3 1381 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 PPP2R5BQ15173 497 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 VPS72Q15906 364 aa12.9□□□□□ -0.34
AMBRA1-211ENST00000533727 EAPPQ56P03 285 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms