RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 PLA2G12BQ9BX93 195 aa11.83□□□□□ -0.52
VPS26B-207ENST00000532160 COA1Q9GZY4 146 aa11.83□□□□□ -0.52
VPS26B-207ENST00000532160 UBE2Q2LH0YL09 131 aa11.82□□□□□ -0.52
VPS26B-207ENST00000532160 SNAP23O00161 211 aa11.82□□□□□ -0.52
VPS26B-207ENST00000532160 SASH1O94885 1247 aa11.82□□□□□ -0.52
VPS26B-207ENST00000532160 STRIP1Q5VSL9 837 aa11.82□□□□□ -0.52
VPS26B-207ENST00000532160 DNAAF4Q8WXU2 420 aa11.82□□□□□ -0.52
VPS26B-207ENST00000532160 LEMD3Q9Y2U8 911 aa11.82□□□□□ -0.52
VPS26B-207ENST00000532160 ZNF804BA4D1E1 1349 aa11.82□□□□□ -0.52
VPS26B-207ENST00000532160 KIF16BQ96L93 1317 aa11.82□□□□□ -0.52
VPS26B-207ENST00000532160 CSF1RP07333 972 aa11.81□□□□□ -0.52
VPS26B-207ENST00000532160 ZKSCAN2Q63HK3 967 aa11.81□□□□□ -0.52
VPS26B-207ENST00000532160 OGFOD1Q8N543 542 aa11.81□□□□□ -0.52
VPS26B-207ENST00000532160 MPHOSPH8Q99549 860 aa11.81□□□□□ -0.52
VPS26B-207ENST00000532160 PTPRCP08575 1304 aa11.81□□□□□ -0.52
VPS26B-207ENST00000532160 MYO3BQ8WXR4 1341 aa11.81□□□□□ -0.52
VPS26B-207ENST00000532160 TRIM27P14373 513 aa11.8□□□□□ -0.52
VPS26B-207ENST00000532160 SOX10P56693 466 aa11.8□□□□□ -0.52
VPS26B-207ENST00000532160 GTF2IP78347 998 aa11.8□□□□□ -0.52
VPS26B-207ENST00000532160 CHRNDQ07001 517 aa11.8□□□□□ -0.52
VPS26B-207ENST00000532160 TTLL12Q14166 644 aaPredicted RBP11.8□□□□□ -0.52
VPS26B-207ENST00000532160 TTLL5Q6EMB2 1281 aa11.8□□□□□ -0.52
VPS26B-207ENST00000532160 ATF7IPQ6VMQ6 1270 aa11.8□□□□□ -0.52
VPS26B-207ENST00000532160 KIAA0825Q8IV33 1275 aa11.8□□□□□ -0.52
VPS26B-207ENST00000532160 IRS2Q9Y4H2 1338 aa11.8□□□□□ -0.52
VPS26B-207ENST00000532160 IPO8O15397 1037 aaKnown RBP11.79□□□□□ -0.52
VPS26B-207ENST00000532160 TBC1D8O95759 1140 aa11.79□□□□□ -0.52
VPS26B-207ENST00000532160 RLBP1P12271 317 aa11.79□□□□□ -0.52
VPS26B-207ENST00000532160 KCNJ4P48050 445 aa11.79□□□□□ -0.52
VPS26B-207ENST00000532160 MKRN3Q13064 507 aaKnown RBP11.79□□□□□ -0.52
VPS26B-207ENST00000532160 POLA2Q14181 598 aa11.79□□□□□ -0.52
VPS26B-207ENST00000532160 CTU1Q7Z7A3 348 aaKnown RBP11.79□□□□□ -0.52
VPS26B-207ENST00000532160 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
VPS26B-207ENST00000532160 LINS1Q8NG48 757 aa11.79□□□□□ -0.52
VPS26B-207ENST00000532160 ZBED3Q96IU2 234 aaPredicted RBP11.79□□□□□ -0.52
VPS26B-207ENST00000532160 API5Q9BZZ5 524 aaKnown RBP11.79□□□□□ -0.52
VPS26B-207ENST00000532160 ANKRD2Q9GZV1 360 aa11.79□□□□□ -0.52
VPS26B-207ENST00000532160 ECM29Q5VYK3 1845 aa11.79□□□□□ -0.52
VPS26B-207ENST00000532160 TAF5LO75529 589 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 SLC34A2O95436 690 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 RRP1P56182 461 aaKnown RBP11.78□□□□□ -0.52
VPS26B-207ENST00000532160 FOXO4P98177 505 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 PRKG1Q13976 671 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 BEND3Q5T5X7 828 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 C20orf194Q5TEA3 1177 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 CERS5Q8N5B7 392 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 HELBQ8NG08 1087 aaPredicted RBP11.78□□□□□ -0.52
VPS26B-207ENST00000532160 PANK1Q8TE04 598 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 ARHGAP45Q92619 1136 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 CD209Q9NNX6 404 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 FZD1Q9UP38 647 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 HTTP42858 3142 aa11.78□□□□□ -0.52
VPS26B-207ENST00000532160 ANKRD18BA2A2Z9 1011 aa11.77□□□□□ -0.53
VPS26B-207ENST00000532160 NF2P35240 595 aa11.77□□□□□ -0.53
VPS26B-207ENST00000532160 PTPN12Q05209 780 aaKnown RBP11.77□□□□□ -0.53
VPS26B-207ENST00000532160 EPHA10Q5JZY3 1008 aa11.77□□□□□ -0.53
VPS26B-207ENST00000532160 APOBEC3FQ8IUX4 373 aaKnown RBP11.77□□□□□ -0.53
VPS26B-207ENST00000532160 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.53
VPS26B-207ENST00000532160 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
VPS26B-207ENST00000532160 TMEM57Q8N5G2 664 aa11.77□□□□□ -0.53
VPS26B-207ENST00000532160 ZNF296Q8WUU4 475 aaPredicted RBP11.77□□□□□ -0.53
VPS26B-207ENST00000532160 SRCIN1Q9C0H9 1055 aa11.77□□□□□ -0.53
VPS26B-207ENST00000532160 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.53
VPS26B-207ENST00000532160 CHMP3Q9Y3E7 222 aa11.77□□□□□ -0.53
VPS26B-207ENST00000532160 SSC5DA1L4H1 1573 aa11.76□□□□□ -0.53
VPS26B-207ENST00000532160 CENPFP49454 3210 aa11.76□□□□□ -0.53
VPS26B-207ENST00000532160 TM4SF4P48230 202 aa11.76□□□□□ -0.53
VPS26B-207ENST00000532160 MMP14P50281 582 aa11.76□□□□□ -0.53
VPS26B-207ENST00000532160 IFIT5Q13325 482 aaKnown RBP11.76□□□□□ -0.53
VPS26B-207ENST00000532160 R3HDMLQ9H3Y0 253 aa11.76□□□□□ -0.53
VPS26B-207ENST00000532160 ANGEL1Q9UNK9 670 aaKnown RBP11.76□□□□□ -0.53
VPS26B-207ENST00000532160 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
VPS26B-207ENST00000532160 JAG2Q9Y219 1238 aa11.76□□□□□ -0.53
VPS26B-207ENST00000532160 AOX1Q06278 1338 aa11.76□□□□□ -0.53
VPS26B-207ENST00000532160 F8W031 263 aaPredicted RBP11.75□□□□□ -0.53
VPS26B-207ENST00000532160 IRX6P78412 446 aaPredicted RBP11.75□□□□□ -0.53
VPS26B-207ENST00000532160 LDLRAD1Q5T700 205 aa11.75□□□□□ -0.53
VPS26B-207ENST00000532160 C15orf52Q6ZUT6 534 aaKnown RBP11.75□□□□□ -0.53
VPS26B-207ENST00000532160 ARMC9Q7Z3E5 817 aa11.75□□□□□ -0.53
VPS26B-207ENST00000532160 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.75□□□□□ -0.53
VPS26B-207ENST00000532160 ZNF594Q96JF6 807 aaPredicted RBP11.75□□□□□ -0.53
VPS26B-207ENST00000532160 DEFB129Q9H1M3 183 aa11.75□□□□□ -0.53
VPS26B-207ENST00000532160 COG6Q9Y2V7 657 aa11.75□□□□□ -0.53
VPS26B-207ENST00000532160 COL1A1P02452 1464 aaPredicted RBP11.75□□□□□ -0.53
VPS26B-207ENST00000532160 MKI67P46013 3256 aaKnown RBP11.74□□□□□ -0.53
VPS26B-207ENST00000532160 CLRN2A0PK11 232 aa11.74□□□□□ -0.53
VPS26B-207ENST00000532160 GPR25O00155 361 aa11.74□□□□□ -0.53
VPS26B-207ENST00000532160 IL1R1P14778 569 aa11.74□□□□□ -0.53
VPS26B-207ENST00000532160 DLGAP5Q15398 846 aa11.74□□□□□ -0.53
VPS26B-207ENST00000532160 CFAP100Q494V2 611 aa11.74□□□□□ -0.53
VPS26B-207ENST00000532160 SPRYD7Q5W111 196 aa11.74□□□□□ -0.53
VPS26B-207ENST00000532160 INTS3Q68E01 1043 aaKnown RBP11.74□□□□□ -0.53
VPS26B-207ENST00000532160 LMBR1LQ6UX01 489 aa11.74□□□□□ -0.53
VPS26B-207ENST00000532160 ITPRIPQ8IWB1 547 aa11.74□□□□□ -0.53
VPS26B-207ENST00000532160 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
VPS26B-207ENST00000532160 SPDYE2BA6NHP3 402 aa11.73□□□□□ -0.53
VPS26B-207ENST00000532160 GRM8O00222 908 aa11.73□□□□□ -0.53
VPS26B-207ENST00000532160 ALDH1L1O75891 902 aa11.73□□□□□ -0.53
VPS26B-207ENST00000532160 LAMB1P07942 1786 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms