RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
CLNS1A-211ENST00000532069 CCL15Q16663 113 aa16.9■□□□□ 0.3
CLNS1A-211ENST00000532069 MTMR14Q8NCE2 650 aa16.9■□□□□ 0.3
CLNS1A-211ENST00000532069 LRCH3Q96II8 777 aa16.9■□□□□ 0.3
CLNS1A-211ENST00000532069 CHPF2Q9P2E5 772 aa16.9■□□□□ 0.3
CLNS1A-211ENST00000532069 TLR2O60603 784 aa16.89■□□□□ 0.29
CLNS1A-211ENST00000532069 CCT4P50991 539 aaKnown RBP16.89■□□□□ 0.29
CLNS1A-211ENST00000532069 TNFAIP1Q13829 316 aa16.89■□□□□ 0.29
CLNS1A-211ENST00000532069 DEFB123Q8N688 67 aa16.89■□□□□ 0.29
CLNS1A-211ENST00000532069 MS4A4AQ96JQ5 239 aa16.89■□□□□ 0.29
CLNS1A-211ENST00000532069 HYPKQ9NX55 129 aa16.89■□□□□ 0.29
CLNS1A-211ENST00000532069 LEMD3Q9Y2U8 911 aa16.89■□□□□ 0.29
CLNS1A-211ENST00000532069 OTOFQ9HC10 1997 aa16.89■□□□□ 0.29
CLNS1A-211ENST00000532069 SOX1O00570 391 aaPredicted RBP16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 USP2O75604 605 aaPredicted RBP16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 FARP2O94887 1054 aaPredicted RBP16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 HOXB7P09629 217 aa16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 KCNA4P22459 653 aa16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 HDGFL1Q5TGJ6 251 aa16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 UBE2Q1Q7Z7E8 422 aa16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 RAET1EQ8TD07 263 aa16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 TRIM47Q96LD4 638 aa16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 COL25A1Q9BXS0 654 aaPredicted RBP16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 ELP3Q9H9T3 547 aa16.88■□□□□ 0.29
CLNS1A-211ENST00000532069 PCCAP05165 728 aaPredicted RBP16.87■□□□□ 0.29
CLNS1A-211ENST00000532069 GRK4P32298 578 aa16.87■□□□□ 0.29
CLNS1A-211ENST00000532069 GOLGA2Q08379 1002 aa16.87■□□□□ 0.29
CLNS1A-211ENST00000532069 RIC3Q7Z5B4 369 aa16.87■□□□□ 0.29
CLNS1A-211ENST00000532069 BRI3BPQ8WY22 251 aa16.87■□□□□ 0.29
CLNS1A-211ENST00000532069 PLEKHF1Q96S99 279 aa16.87■□□□□ 0.29
CLNS1A-211ENST00000532069 VEZTQ9HBM0 779 aa16.87■□□□□ 0.29
CLNS1A-211ENST00000532069 BSDC1Q9NW68 430 aaPredicted RBP16.87■□□□□ 0.29
CLNS1A-211ENST00000532069 SPEF2Q9C093 1822 aa16.86■□□□□ 0.29
CLNS1A-211ENST00000532069 MTFR1Q15390 333 aa16.86■□□□□ 0.29
CLNS1A-211ENST00000532069 NBPF12Q5TAG4 269 aaPredicted RBP16.86■□□□□ 0.29
CLNS1A-211ENST00000532069 CCDC191Q8NCU4 936 aa16.86■□□□□ 0.29
CLNS1A-211ENST00000532069 RNF208Q9H0X6 261 aa16.86■□□□□ 0.29
CLNS1A-211ENST00000532069 BIN2Q9UBW5 565 aaPredicted RBP16.86■□□□□ 0.29
CLNS1A-211ENST00000532069 CSADQ9Y600 493 aa16.86■□□□□ 0.29
CLNS1A-211ENST00000532069 CETPP11597 493 aa16.85■□□□□ 0.29
CLNS1A-211ENST00000532069 CCL5P13501 91 aa16.85■□□□□ 0.29
CLNS1A-211ENST00000532069 BMP8BP34820 402 aa16.85■□□□□ 0.29
CLNS1A-211ENST00000532069 GTF2IP78347 998 aa16.85■□□□□ 0.29
CLNS1A-211ENST00000532069 SRRDQ9UH36 339 aa16.85■□□□□ 0.29
CLNS1A-211ENST00000532069 MINPP1Q9UNW1 487 aa16.85■□□□□ 0.29
CLNS1A-211ENST00000532069 MYH3P11055 1940 aa16.85■□□□□ 0.29
CLNS1A-211ENST00000532069 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLNS1A-211ENST00000532069 CCDC85AQ96PX6 553 aaPredicted RBP16.84■□□□□ 0.29
CLNS1A-211ENST00000532069 ANKRD2Q9GZV1 360 aa16.84■□□□□ 0.29
CLNS1A-211ENST00000532069 RIPOR2Q9Y4F9 1068 aa16.84■□□□□ 0.29
CLNS1A-211ENST00000532069 CLRN2A0PK11 232 aa16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 ZSWIM8A7E2V4 1837 aa16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 RIPK4P57078 832 aa16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 RASA3Q14644 834 aa16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 LAMA3Q16787 3333 aa16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 U2AF1L4Q8WU68 220 aaKnown RBP16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 ARHGAP39Q9C0H5 1083 aa16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 STAP2Q9UGK3 403 aa16.83■□□□□ 0.28
CLNS1A-211ENST00000532069 MYPNQ86TC9 1320 aa16.82■□□□□ 0.28
CLNS1A-211ENST00000532069 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
CLNS1A-211ENST00000532069 KCNJ4P48050 445 aa16.82■□□□□ 0.28
CLNS1A-211ENST00000532069 MAP3K9P80192 1104 aa16.82■□□□□ 0.28
CLNS1A-211ENST00000532069 CFAP100Q494V2 611 aa16.82■□□□□ 0.28
CLNS1A-211ENST00000532069 UNC80Q8N2C7 3258 aa16.81■□□□□ 0.28
CLNS1A-211ENST00000532069 FMNL1O95466 1100 aaPredicted RBP16.81■□□□□ 0.28
CLNS1A-211ENST00000532069 PSMC4P43686 418 aa16.81■□□□□ 0.28
CLNS1A-211ENST00000532069 TNNI2P48788 182 aa16.81■□□□□ 0.28
CLNS1A-211ENST00000532069 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
CLNS1A-211ENST00000532069 CTSWP56202 376 aa16.81■□□□□ 0.28
CLNS1A-211ENST00000532069 LRIT3Q3SXY7 679 aa16.81■□□□□ 0.28
CLNS1A-211ENST00000532069 SLAIN1Q8ND83 568 aa16.81■□□□□ 0.28
CLNS1A-211ENST00000532069 MTMR10Q9NXD2 777 aa16.81■□□□□ 0.28
CLNS1A-211ENST00000532069 SGPL1O95470 568 aa16.8■□□□□ 0.28
CLNS1A-211ENST00000532069 FKBP1AP62942 108 aaKnown RBP16.8■□□□□ 0.28
CLNS1A-211ENST00000532069 SNAPC2Q13487 334 aa16.8■□□□□ 0.28
CLNS1A-211ENST00000532069 MYD88Q99836 296 aa16.8■□□□□ 0.28
CLNS1A-211ENST00000532069 TRIM26Q12899 539 aaPredicted RBP16.79■□□□□ 0.28
CLNS1A-211ENST00000532069 VGLL4Q14135 290 aa16.79■□□□□ 0.28
CLNS1A-211ENST00000532069 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.79■□□□□ 0.28
CLNS1A-211ENST00000532069 SPDYE5A6NIY4 337 aa16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 OSBPP22059 807 aa16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 C17orf99Q6UX52 265 aa16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 TXNRD3Q86VQ6 643 aa16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 ERO1BQ86YB8 467 aa16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 PRMT6Q96LA8 375 aaPredicted RBP16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 GDF15Q99988 308 aa16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 CD209Q9NNX6 404 aa16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 PRDM6Q9NQX0 595 aa16.78■□□□□ 0.28
CLNS1A-211ENST00000532069 BTBD19C9JJ37 291 aa16.77■□□□□ 0.28
CLNS1A-211ENST00000532069 F8W031 263 aaPredicted RBP16.77■□□□□ 0.28
CLNS1A-211ENST00000532069 DDX58O95786 925 aaKnown RBP16.77■□□□□ 0.28
CLNS1A-211ENST00000532069 TFRCP02786 760 aaKnown RBP16.77■□□□□ 0.28
CLNS1A-211ENST00000532069 Q7L0L9 218 aa16.77■□□□□ 0.28
CLNS1A-211ENST00000532069 TDHQ8IZJ6 230 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms