RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 STRIP1Q5VSL9 837 aa16.71■□□□□ 0.27
FDFT1-219ENST00000531249 RSBN1LQ6PCB5 846 aaPredicted RBP16.71■□□□□ 0.27
FDFT1-219ENST00000531249 RRAGCQ9HB90 399 aa16.71■□□□□ 0.27
FDFT1-219ENST00000531249 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
FDFT1-219ENST00000531249 GPBP1L1Q9HC44 474 aaPredicted RBP16.7■□□□□ 0.26
FDFT1-219ENST00000531249 NMRK2Q9NPI5 230 aa16.7■□□□□ 0.26
FDFT1-219ENST00000531249 SCNN1DP51172 638 aa16.69■□□□□ 0.26
FDFT1-219ENST00000531249 SMC5Q8IY18 1101 aa16.69■□□□□ 0.26
FDFT1-219ENST00000531249 ZNF784Q8NCA9 323 aaPredicted RBP16.69■□□□□ 0.26
FDFT1-219ENST00000531249 FAM205AQ6ZU69 1335 aa16.69■□□□□ 0.26
FDFT1-219ENST00000531249 SHTN1A0MZ66 631 aa16.68■□□□□ 0.26
FDFT1-219ENST00000531249 UQCRFS1P1P0C7P4 283 aa16.68■□□□□ 0.26
FDFT1-219ENST00000531249 LMOD1P29536 600 aaPredicted RBP16.68■□□□□ 0.26
FDFT1-219ENST00000531249 RASGRF1Q13972 1273 aa16.68■□□□□ 0.26
FDFT1-219ENST00000531249 SCARF1Q14162 830 aa16.68■□□□□ 0.26
FDFT1-219ENST00000531249 C16orf71Q8IYS4 520 aaPredicted RBP16.68■□□□□ 0.26
FDFT1-219ENST00000531249 CERS5Q8N5B7 392 aa16.68■□□□□ 0.26
FDFT1-219ENST00000531249 L3MBTL3Q96JM7 780 aaPredicted RBP16.68■□□□□ 0.26
FDFT1-219ENST00000531249 DENND2AQ9ULE3 1009 aa16.68■□□□□ 0.26
FDFT1-219ENST00000531249 COL1A1P02452 1464 aaPredicted RBP16.67■□□□□ 0.26
FDFT1-219ENST00000531249 POTECB2RU33 542 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 F8W031 263 aaPredicted RBP16.67■□□□□ 0.26
FDFT1-219ENST00000531249 RPS12P25398 132 aaKnown RBP16.67■□□□□ 0.26
FDFT1-219ENST00000531249 ARID4AP29374 1257 aaPredicted RBP16.67■□□□□ 0.26
FDFT1-219ENST00000531249 EPS15P42566 896 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 MCAMP43121 646 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 MFSD14BQ5SR56 506 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 PI16Q6UXB8 463 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 KIAA0825Q8IV33 1275 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 AGBL3Q8NEM8 1001 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 SNRKQ9NRH2 765 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 PPP4R2Q9NY27 417 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 HMG20BQ9P0W2 317 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 CNOT7Q9UIV1 285 aaKnown RBP16.67■□□□□ 0.26
FDFT1-219ENST00000531249 HACL1Q9UJ83 578 aa16.67■□□□□ 0.26
FDFT1-219ENST00000531249 SEMA3EO15041 775 aa16.66■□□□□ 0.26
FDFT1-219ENST00000531249 MICALL2Q8IY33 904 aa16.66■□□□□ 0.26
FDFT1-219ENST00000531249 OTUD7AQ8TE49 926 aaPredicted RBP16.66■□□□□ 0.26
FDFT1-219ENST00000531249 DPF2Q92785 391 aa16.66■□□□□ 0.26
FDFT1-219ENST00000531249 GMLQ99445 158 aa16.66■□□□□ 0.26
FDFT1-219ENST00000531249 LNPKQ9C0E8 428 aa16.66■□□□□ 0.26
FDFT1-219ENST00000531249 GPRC5DQ9NZD1 345 aa16.66■□□□□ 0.26
FDFT1-219ENST00000531249 MYO3BQ8WXR4 1341 aa16.66■□□□□ 0.26
FDFT1-219ENST00000531249 PSME4Q14997 1843 aa16.66■□□□□ 0.26
FDFT1-219ENST00000531249 WDR90Q96KV7 1748 aa16.65■□□□□ 0.26
FDFT1-219ENST00000531249 IQCA1LA6NCM1 817 aa16.65■□□□□ 0.26
FDFT1-219ENST00000531249 H7C1D1 291 aa16.65■□□□□ 0.26
FDFT1-219ENST00000531249 VEGFAP15692 232 aaPredicted RBP16.65■□□□□ 0.26
FDFT1-219ENST00000531249 GRIK5Q16478 980 aa16.65■□□□□ 0.26
FDFT1-219ENST00000531249 RBM26Q5T8P6 1007 aaKnown RBP16.65■□□□□ 0.26
FDFT1-219ENST00000531249 SPATA5Q8NB90 893 aa16.65■□□□□ 0.26
FDFT1-219ENST00000531249 WDR66Q8TBY9 1149 aa16.65■□□□□ 0.26
FDFT1-219ENST00000531249 TBC1D22AQ8WUA7 517 aa16.65■□□□□ 0.26
FDFT1-219ENST00000531249 CCDC136Q96JN2 1154 aa16.65■□□□□ 0.26
FDFT1-219ENST00000531249 ZNF646O15015 1829 aaPredicted RBP16.64■□□□□ 0.25
FDFT1-219ENST00000531249 USP17L8P0C7I0 530 aa16.64■□□□□ 0.25
FDFT1-219ENST00000531249 EPHX2P34913 555 aa16.64■□□□□ 0.25
FDFT1-219ENST00000531249 FKBP1AP62942 108 aaKnown RBP16.64■□□□□ 0.25
FDFT1-219ENST00000531249 TSHZ3Q63HK5 1081 aa16.64■□□□□ 0.25
FDFT1-219ENST00000531249 TAF1DQ9H5J8 278 aaPredicted RBP16.64■□□□□ 0.25
FDFT1-219ENST00000531249 NDUFB9Q9Y6M9 179 aa16.64■□□□□ 0.25
FDFT1-219ENST00000531249 MYH13Q9UKX3 1938 aa16.63■□□□□ 0.25
FDFT1-219ENST00000531249 ZAP70P43403 619 aa16.63■□□□□ 0.25
FDFT1-219ENST00000531249 NUCB1Q02818 461 aa16.63■□□□□ 0.25
FDFT1-219ENST00000531249 TBC1D10BQ4KMP7 808 aaPredicted RBP16.63■□□□□ 0.25
FDFT1-219ENST00000531249 EAPPQ56P03 285 aaPredicted RBP16.63■□□□□ 0.25
FDFT1-219ENST00000531249 TBC1D9Q6ZT07 1266 aa16.63■□□□□ 0.25
FDFT1-219ENST00000531249 SAMD7Q7Z3H4 446 aa16.63■□□□□ 0.25
FDFT1-219ENST00000531249 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
FDFT1-219ENST00000531249 OGFOD1Q8N543 542 aa16.63■□□□□ 0.25
FDFT1-219ENST00000531249 ZNF512BQ96KM6 892 aaPredicted RBP16.63■□□□□ 0.25
FDFT1-219ENST00000531249 BOLA2Q9H3K6 86 aa16.63■□□□□ 0.25
FDFT1-219ENST00000531249 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
FDFT1-219ENST00000531249 TTF2Q9UNY4 1162 aaKnown RBP16.63■□□□□ 0.25
FDFT1-219ENST00000531249 TRPM4Q8TD43 1214 aa16.62■□□□□ 0.25
FDFT1-219ENST00000531249 GPATCH3Q96I76 525 aa16.62■□□□□ 0.25
FDFT1-219ENST00000531249 DNAJC2Q99543 621 aaKnown RBP16.62■□□□□ 0.25
FDFT1-219ENST00000531249 ADARB2Q9NS39 739 aaKnown RBP16.62■□□□□ 0.25
FDFT1-219ENST00000531249 ECHDC1Q9NTX5 307 aa16.62■□□□□ 0.25
FDFT1-219ENST00000531249 HDAC9Q9UKV0 1011 aa16.62■□□□□ 0.25
FDFT1-219ENST00000531249 KIF3CO14782 793 aa16.61■□□□□ 0.25
FDFT1-219ENST00000531249 ZBTB22O15209 634 aa16.61■□□□□ 0.25
FDFT1-219ENST00000531249 EGFRP00533 1210 aa16.61■□□□□ 0.25
FDFT1-219ENST00000531249 LDHBP07195 334 aaKnown RBP16.61■□□□□ 0.25
FDFT1-219ENST00000531249 PRDX5P30044 214 aa16.61■□□□□ 0.25
FDFT1-219ENST00000531249 ZNF280AP59817 542 aaPredicted RBP16.61■□□□□ 0.25
FDFT1-219ENST00000531249 PDS5AQ29RF7 1337 aaKnown RBP16.61■□□□□ 0.25
FDFT1-219ENST00000531249 CYP2E1P05181 493 aaPredicted RBP16.6■□□□□ 0.25
FDFT1-219ENST00000531249 POTEIP0CG38 1075 aa16.6■□□□□ 0.25
FDFT1-219ENST00000531249 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
FDFT1-219ENST00000531249 ATP5JP18859 108 aa16.6■□□□□ 0.25
FDFT1-219ENST00000531249 MX1P20591 662 aa16.6■□□□□ 0.25
FDFT1-219ENST00000531249 RBM5P52756 815 aaKnown RBP eCLIP16.6■□□□□ 0.25
FDFT1-219ENST00000531249 ZGPATQ8N5A5 531 aaKnown RBP16.6■□□□□ 0.25
FDFT1-219ENST00000531249 MYOZ2Q9NPC6 264 aa16.6■□□□□ 0.25
FDFT1-219ENST00000531249 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
FDFT1-219ENST00000531249 PCDHAC2Q9Y5I4 1007 aa16.6■□□□□ 0.25
FDFT1-219ENST00000531249 SCN4AP35499 1836 aa16.6■□□□□ 0.25
FDFT1-219ENST00000531249 SALL1Q9NSC2 1324 aa16.6■□□□□ 0.25
FDFT1-219ENST00000531249 KIF4BQ2VIQ3 1234 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms