RNA–Protein interactions for RNA: ENST00000528281.5

CNKSR1-212, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-212ENST00000528281 ZBED3Q96IU2 234 aaPredicted RBP22.3■■□□□ 1.16
CNKSR1-212ENST00000528281 FAM84BQ96KN1 310 aaPredicted RBP22.3■■□□□ 1.16
CNKSR1-212ENST00000528281 BEGAINQ9BUH8 593 aa22.3■■□□□ 1.16
CNKSR1-212ENST00000528281 HDAC5Q9UQL6 1122 aa22.3■■□□□ 1.16
CNKSR1-212ENST00000528281 PDE8BO95263 885 aa22.29■■□□□ 1.16
CNKSR1-212ENST00000528281 GYG1P46976 350 aa22.29■■□□□ 1.16
CNKSR1-212ENST00000528281 RGMBQ6NW40 437 aa22.29■■□□□ 1.16
CNKSR1-212ENST00000528281 TNS4Q8IZW8 715 aa22.29■■□□□ 1.16
CNKSR1-212ENST00000528281 VGLL2Q8N8G2 317 aa22.29■■□□□ 1.16
CNKSR1-212ENST00000528281 ECM29Q5VYK3 1845 aa22.29■■□□□ 1.16
CNKSR1-212ENST00000528281 FAM205AQ6ZU69 1335 aa22.29■■□□□ 1.16
CNKSR1-212ENST00000528281 PAPPA2Q9BXP8 1791 aa22.28■■□□□ 1.16
CNKSR1-212ENST00000528281 RFX5P48382 616 aaPredicted RBP22.28■■□□□ 1.16
CNKSR1-212ENST00000528281 FKBP1BP68106 108 aa22.28■■□□□ 1.16
CNKSR1-212ENST00000528281 NOGQ13253 232 aa22.28■■□□□ 1.16
CNKSR1-212ENST00000528281 MTMR14Q8NCE2 650 aa22.28■■□□□ 1.16
CNKSR1-212ENST00000528281 LBX1P52954 281 aa22.27■■□□□ 1.16
CNKSR1-212ENST00000528281 HNRNPUQ00839 825 aaKnown RBP eCLIP22.27■■□□□ 1.16
CNKSR1-212ENST00000528281 DLGAP5Q15398 846 aa22.27■■□□□ 1.16
CNKSR1-212ENST00000528281 APOBEC3FQ8IUX4 373 aaKnown RBP22.27■■□□□ 1.16
CNKSR1-212ENST00000528281 ARAP2Q8WZ64 1704 aa22.27■■□□□ 1.16
CNKSR1-212ENST00000528281 CCDC102AQ96A19 550 aa22.27■■□□□ 1.16
CNKSR1-212ENST00000528281 SCAF8Q9UPN6 1271 aaKnown RBP22.27■■□□□ 1.16
CNKSR1-212ENST00000528281 EYA2O00167 538 aa22.26■■□□□ 1.15
CNKSR1-212ENST00000528281 IPO8O15397 1037 aaKnown RBP22.26■■□□□ 1.15
CNKSR1-212ENST00000528281 HSPA8P11142 646 aaKnown RBP22.26■■□□□ 1.15
CNKSR1-212ENST00000528281 PTPN12Q05209 780 aaKnown RBP22.26■■□□□ 1.15
CNKSR1-212ENST00000528281 CAVIN4Q5BKX8 364 aa22.26■■□□□ 1.15
CNKSR1-212ENST00000528281 INTS3Q68E01 1043 aaKnown RBP22.26■■□□□ 1.15
CNKSR1-212ENST00000528281 FBXO33Q7Z6M2 555 aa22.26■■□□□ 1.15
CNKSR1-212ENST00000528281 VPS37DQ86XT2 251 aa22.26■■□□□ 1.15
CNKSR1-212ENST00000528281 JAG2Q9Y219 1238 aa22.26■■□□□ 1.15
CNKSR1-212ENST00000528281 F8W031 263 aaPredicted RBP22.25■■□□□ 1.15
CNKSR1-212ENST00000528281 ZNF157P51786 506 aaPredicted RBP22.25■■□□□ 1.15
CNKSR1-212ENST00000528281 FBXO3Q9UK99 471 aa22.25■■□□□ 1.15
CNKSR1-212ENST00000528281 FAM155AB1AL88 458 aaPredicted RBP22.24■■□□□ 1.15
CNKSR1-212ENST00000528281 PUM3Q15397 648 aaKnown RBP22.24■■□□□ 1.15
CNKSR1-212ENST00000528281 MFSD14BQ5SR56 506 aa22.24■■□□□ 1.15
CNKSR1-212ENST00000528281 LRRFIP2Q9Y608 721 aaKnown RBP22.24■■□□□ 1.15
CNKSR1-212ENST00000528281 COL1A1P02452 1464 aaPredicted RBP22.23■■□□□ 1.15
CNKSR1-212ENST00000528281 CA12O43570 354 aa22.23■■□□□ 1.15
CNKSR1-212ENST00000528281 MYO1BO43795 1136 aa22.23■■□□□ 1.15
CNKSR1-212ENST00000528281 NF2P35240 595 aa22.23■■□□□ 1.15
CNKSR1-212ENST00000528281 CFAP100Q494V2 611 aa22.23■■□□□ 1.15
CNKSR1-212ENST00000528281 PRAMEF18Q5VWM3 479 aa22.23■■□□□ 1.15
CNKSR1-212ENST00000528281 MEIS3Q99687 375 aa22.23■■□□□ 1.15
CNKSR1-212ENST00000528281 SPDYE2BA6NHP3 402 aa22.22■■□□□ 1.15
CNKSR1-212ENST00000528281 BCAR3O75815 825 aa22.22■■□□□ 1.15
CNKSR1-212ENST00000528281 CIAO1O76071 339 aa22.22■■□□□ 1.15
CNKSR1-212ENST00000528281 GNAI3P08754 354 aa22.22■■□□□ 1.15
CNKSR1-212ENST00000528281 SLC10A3P09131 477 aa22.22■■□□□ 1.15
CNKSR1-212ENST00000528281 IFIT1P09914 478 aaKnown RBP22.22■■□□□ 1.15
CNKSR1-212ENST00000528281 SPDYE6P0CI01 402 aa22.22■■□□□ 1.15
CNKSR1-212ENST00000528281 FGFR2P21802 821 aa22.22■■□□□ 1.15
CNKSR1-212ENST00000528281 ATG9AQ7Z3C6 839 aa22.22■■□□□ 1.15
CNKSR1-212ENST00000528281 ZIC5Q96T25 663 aa22.22■■□□□ 1.15
CNKSR1-212ENST00000528281 TRIM27P14373 513 aa22.21■■□□□ 1.15
CNKSR1-212ENST00000528281 ATF7IPQ6VMQ6 1270 aa22.21■■□□□ 1.15
CNKSR1-212ENST00000528281 PRMT6Q96LA8 375 aaPredicted RBP22.21■■□□□ 1.15
CNKSR1-212ENST00000528281 TTF2Q9UNY4 1162 aaKnown RBP22.21■■□□□ 1.15
CNKSR1-212ENST00000528281 PCDHAC2Q9Y5I4 1007 aa22.21■■□□□ 1.15
CNKSR1-212ENST00000528281 FRAT2O75474 233 aaPredicted RBP22.2■■□□□ 1.14
CNKSR1-212ENST00000528281 BCAMP50895 628 aa22.2■■□□□ 1.14
CNKSR1-212ENST00000528281 RBM5P52756 815 aaKnown RBP eCLIP22.2■■□□□ 1.14
CNKSR1-212ENST00000528281 TBC1D22AQ8WUA7 517 aa22.2■■□□□ 1.14
CNKSR1-212ENST00000528281 LPIN2Q92539 896 aa22.2■■□□□ 1.14
CNKSR1-212ENST00000528281 FRAT1Q92837 279 aaPredicted RBP22.2■■□□□ 1.14
CNKSR1-212ENST00000528281 SERPINA10Q9UK55 444 aa22.2■■□□□ 1.14
CNKSR1-212ENST00000528281 IQSEC3Q9UPP2 1182 aaPredicted RBP22.2■■□□□ 1.14
CNKSR1-212ENST00000528281 SLC5A1P13866 664 aa22.19■■□□□ 1.14
CNKSR1-212ENST00000528281 TTLL12Q14166 644 aaPredicted RBP22.19■■□□□ 1.14
CNKSR1-212ENST00000528281 MOB2Q70IA6 237 aa22.19■■□□□ 1.14
CNKSR1-212ENST00000528281 SIL1Q9H173 461 aa22.19■■□□□ 1.14
CNKSR1-212ENST00000528281 DEFB129Q9H1M3 183 aa22.19■■□□□ 1.14
CNKSR1-212ENST00000528281 PPP2R3BQ9Y5P8 575 aa22.19■■□□□ 1.14
CNKSR1-212ENST00000528281 MYH13Q9UKX3 1938 aa22.19■■□□□ 1.14
CNKSR1-212ENST00000528281 UBE2Q2LH0YL09 131 aa22.18■■□□□ 1.14
CNKSR1-212ENST00000528281 KIF23Q02241 960 aaPredicted RBP22.18■■□□□ 1.14
CNKSR1-212ENST00000528281 CHAF1AQ13111 956 aaPredicted RBP22.18■■□□□ 1.14
CNKSR1-212ENST00000528281 RASAL3Q86YV0 1011 aa22.18■■□□□ 1.14
CNKSR1-212ENST00000528281 COPRSQ9NQ92 184 aa22.18■■□□□ 1.14
CNKSR1-212ENST00000528281 CEP126Q9P2H0 1117 aa22.18■■□□□ 1.14
CNKSR1-212ENST00000528281 CLRN2A0PK11 232 aa22.17■■□□□ 1.14
CNKSR1-212ENST00000528281 IL15P40933 162 aaPredicted RBP22.17■■□□□ 1.14
CNKSR1-212ENST00000528281 AKAP11Q9UKA4 1901 aa22.17■■□□□ 1.14
CNKSR1-212ENST00000528281 ZBED9Q6R2W3 1325 aa22.16■■□□□ 1.14
CNKSR1-212ENST00000528281 ZKSCAN2Q63HK3 967 aa22.16■■□□□ 1.14
CNKSR1-212ENST00000528281 ARMC9Q7Z3E5 817 aa22.16■■□□□ 1.14
CNKSR1-212ENST00000528281 REM2Q8IYK8 340 aaPredicted RBP22.16■■□□□ 1.14
CNKSR1-212ENST00000528281 VEZTQ9HBM0 779 aa22.16■■□□□ 1.14
CNKSR1-212ENST00000528281 TSKSQ9UJT2 592 aa22.16■■□□□ 1.14
CNKSR1-212ENST00000528281 TNNQ9UQP3 1299 aa22.16■■□□□ 1.14
CNKSR1-212ENST00000528281 AOX1Q06278 1338 aa22.15■■□□□ 1.14
CNKSR1-212ENST00000528281 CRKP46108 304 aa22.15■■□□□ 1.14
CNKSR1-212ENST00000528281 HDLBPQ00341 1268 aaKnown RBP22.15■■□□□ 1.14
CNKSR1-212ENST00000528281 MTX1Q13505 466 aa22.15■■□□□ 1.14
CNKSR1-212ENST00000528281 CLUAP1Q96AJ1 413 aa22.15■■□□□ 1.14
CNKSR1-212ENST00000528281 PA2G4Q9UQ80 394 aaKnown RBP22.15■■□□□ 1.14
CNKSR1-212ENST00000528281 ATP2B3Q16720 1220 aa22.14■■□□□ 1.13
CNKSR1-212ENST00000528281 SPDYE2Q495Y8 402 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms