RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 FBXO33Q7Z6M2 555 aa41.27■■■■■ 4.2
SSSCA1-205ENST00000527920 CAPNS2Q96L46 248 aa41.27■■■■■ 4.2
SSSCA1-205ENST00000527920 POLR2AP24928 1970 aaKnown RBP41.26■■■■■ 4.2
SSSCA1-205ENST00000527920 CIAO1O76071 339 aa41.26■■■■■ 4.2
SSSCA1-205ENST00000527920 PUM3Q15397 648 aaKnown RBP41.26■■■■■ 4.2
SSSCA1-205ENST00000527920 DLK2Q6UY11 383 aa41.26■■■■■ 4.2
SSSCA1-205ENST00000527920 ZBED3Q96IU2 234 aaPredicted RBP41.26■■■■■ 4.2
SSSCA1-205ENST00000527920 ZKSCAN2Q63HK3 967 aa41.25■■■■■ 4.19
SSSCA1-205ENST00000527920 FGFR2P21802 821 aa41.24■■■■■ 4.19
SSSCA1-205ENST00000527920 MTMR14Q8NCE2 650 aa41.24■■■■■ 4.19
SSSCA1-205ENST00000527920 THSD7BQ9C0I4 1608 aa41.24■■■■■ 4.19
SSSCA1-205ENST00000527920 CAVIN4Q5BKX8 364 aa41.23■■■■■ 4.19
SSSCA1-205ENST00000527920 ATG9AQ7Z3C6 839 aa41.23■■■■■ 4.19
SSSCA1-205ENST00000527920 CDCA5Q96FF9 252 aa41.23■■■■■ 4.19
SSSCA1-205ENST00000527920 GBA2Q9HCG7 927 aaPredicted RBP41.23■■■■■ 4.19
SSSCA1-205ENST00000527920 MTX1Q13505 466 aa41.22■■■■■ 4.19
SSSCA1-205ENST00000527920 IFIT1P09914 478 aaKnown RBP41.21■■■■■ 4.19
SSSCA1-205ENST00000527920 CYP4F22Q6NT55 531 aa41.21■■■■■ 4.19
SSSCA1-205ENST00000527920 PAXIP1Q6ZW49 1069 aaPredicted RBP41.21■■■■■ 4.19
SSSCA1-205ENST00000527920 VPS37DQ86XT2 251 aa41.21■■■■■ 4.19
SSSCA1-205ENST00000527920 C2orf69Q8N8R5 385 aa41.21■■■■■ 4.19
SSSCA1-205ENST00000527920 COPRSQ9NQ92 184 aa41.2■■■■■ 4.19
SSSCA1-205ENST00000527920 TNNQ9UQP3 1299 aa41.2■■■■■ 4.19
SSSCA1-205ENST00000527920 LPIN2Q92539 896 aa41.19■■■■■ 4.18
SSSCA1-205ENST00000527920 CLUAP1Q96AJ1 413 aa41.19■■■■■ 4.18
SSSCA1-205ENST00000527920 WBP1LQ9NX94 342 aa41.19■■■■■ 4.18
SSSCA1-205ENST00000527920 HUNKP57058 714 aa41.18■■■■■ 4.18
SSSCA1-205ENST00000527920 MAP2K1Q02750 393 aaPredicted RBP41.18■■■■■ 4.18
SSSCA1-205ENST00000527920 DLGAP5Q15398 846 aa41.18■■■■■ 4.18
SSSCA1-205ENST00000527920 MFSD14BQ5SR56 506 aa41.17■■■■■ 4.18
SSSCA1-205ENST00000527920 MAP2K2P36507 400 aa41.16■■■■■ 4.18
SSSCA1-205ENST00000527920 IL15P40933 162 aaPredicted RBP41.16■■■■■ 4.18
SSSCA1-205ENST00000527920 APOBEC3FQ8IUX4 373 aaKnown RBP41.16■■■■■ 4.18
SSSCA1-205ENST00000527920 JAG2Q9Y219 1238 aa41.16■■■■■ 4.18
SSSCA1-205ENST00000527920 SLC5A1P13866 664 aa41.15■■■■■ 4.18
SSSCA1-205ENST00000527920 FKBP1BP68106 108 aa41.15■■■■■ 4.18
SSSCA1-205ENST00000527920 SIL1Q9H173 461 aa41.15■■■■■ 4.18
SSSCA1-205ENST00000527920 GNAI2P04899 355 aa41.14■■■■■ 4.18
SSSCA1-205ENST00000527920 AIDAQ96BJ3 306 aa41.14■■■■■ 4.18
SSSCA1-205ENST00000527920 CEP126Q9P2H0 1117 aa41.14■■■■■ 4.18
SSSCA1-205ENST00000527920 TMEM57Q8N5G2 664 aa41.13■■■■■ 4.17
SSSCA1-205ENST00000527920 TBC1D22AQ8WUA7 517 aa41.13■■■■■ 4.17
SSSCA1-205ENST00000527920 SPDYE2BA6NHP3 402 aa41.12■■■■■ 4.17
SSSCA1-205ENST00000527920 F8W031 263 aaPredicted RBP41.12■■■■■ 4.17
SSSCA1-205ENST00000527920 SPDYE6P0CI01 402 aa41.12■■■■■ 4.17
SSSCA1-205ENST00000527920 BCAMP50895 628 aa41.12■■■■■ 4.17
SSSCA1-205ENST00000527920 SRGAP3O43295 1099 aa41.11■■■■■ 4.17
SSSCA1-205ENST00000527920 CFAP100Q494V2 611 aa41.11■■■■■ 4.17
SSSCA1-205ENST00000527920 PA2G4Q9UQ80 394 aaKnown RBP41.11■■■■■ 4.17
SSSCA1-205ENST00000527920 ARAP2Q8WZ64 1704 aa41.1■■■■■ 4.17
SSSCA1-205ENST00000527920 COL1A1P02452 1464 aaPredicted RBP41.1■■■■■ 4.17
SSSCA1-205ENST00000527920 GRM1Q13255 1194 aa41.1■■■■■ 4.17
SSSCA1-205ENST00000527920 SERPINA10Q9UK55 444 aa41.1■■■■■ 4.17
SSSCA1-205ENST00000527920 FOXN1O15353 648 aa41.09■■■■■ 4.17
SSSCA1-205ENST00000527920 FRAT2O75474 233 aaPredicted RBP41.09■■■■■ 4.17
SSSCA1-205ENST00000527920 RGMBQ6NW40 437 aa41.09■■■■■ 4.17
SSSCA1-205ENST00000527920 PAPPA2Q9BXP8 1791 aa41.09■■■■■ 4.17
SSSCA1-205ENST00000527920 MYO1BO43795 1136 aa41.08■■■■■ 4.17
SSSCA1-205ENST00000527920 ATP2B3Q16720 1220 aa41.08■■■■■ 4.17
SSSCA1-205ENST00000527920 FTSJ3Q8IY81 847 aaKnown RBP41.08■■■■■ 4.17
SSSCA1-205ENST00000527920 TTF2Q9UNY4 1162 aaKnown RBP41.08■■■■■ 4.17
SSSCA1-205ENST00000527920 IQSEC3Q9UPP2 1182 aaPredicted RBP41.08■■■■■ 4.17
SSSCA1-205ENST00000527920 NOGQ13253 232 aa41.07■■■■■ 4.17
SSSCA1-205ENST00000527920 DZIP1LQ8IYY4 767 aaKnown RBP41.07■■■■■ 4.17
SSSCA1-205ENST00000527920 SCAF8Q9UPN6 1271 aaKnown RBP41.07■■■■■ 4.17
SSSCA1-205ENST00000527920 CTCFP49711 727 aaPredicted RBP41.06■■■■■ 4.16
SSSCA1-205ENST00000527920 AOC2O75106 756 aa41.05■■■■■ 4.16
SSSCA1-205ENST00000527920 CCDC102AQ96A19 550 aa41.05■■■■■ 4.16
SSSCA1-205ENST00000527920 PRMT6Q96LA8 375 aaPredicted RBP41.05■■■■■ 4.16
SSSCA1-205ENST00000527920 SUGT1Q9Y2Z0 365 aa41.05■■■■■ 4.16
SSSCA1-205ENST00000527920 ZBTB22O15209 634 aa41.04■■■■■ 4.16
SSSCA1-205ENST00000527920 CHAF1AQ13111 956 aaPredicted RBP41.04■■■■■ 4.16
SSSCA1-205ENST00000527920 PCDHAC2Q9Y5I4 1007 aa41.04■■■■■ 4.16
SSSCA1-205ENST00000527920 PPP2R3BQ9Y5P8 575 aa41.04■■■■■ 4.16
SSSCA1-205ENST00000527920 NF2P35240 595 aa41.03■■■■■ 4.16
SSSCA1-205ENST00000527920 HDLBPQ00341 1268 aaKnown RBP41.03■■■■■ 4.16
SSSCA1-205ENST00000527920 COL13A1Q5TAT6 717 aaPredicted RBP41.03■■■■■ 4.16
SSSCA1-205ENST00000527920 RBM5P52756 815 aaKnown RBP eCLIP41.02■■■■■ 4.16
SSSCA1-205ENST00000527920 DEFB129Q9H1M3 183 aa41.02■■■■■ 4.16
SSSCA1-205ENST00000527920 FAM155AB1AL88 458 aaPredicted RBP41.01■■■■■ 4.16
SSSCA1-205ENST00000527920 PRAMEF18Q5VWM3 479 aa41.01■■■■■ 4.16
SSSCA1-205ENST00000527920 ECM29Q5VYK3 1845 aa41.01■■■■■ 4.16
SSSCA1-205ENST00000527920 RLBP1P12271 317 aa41■■■■■ 4.15
SSSCA1-205ENST00000527920 ZNF157P51786 506 aaPredicted RBP41■■■■■ 4.15
SSSCA1-205ENST00000527920 BEGAINQ9BUH8 593 aa41■■■■■ 4.15
SSSCA1-205ENST00000527920 MRIQ9BWK5 157 aa41■■■■■ 4.15
SSSCA1-205ENST00000527920 PRDM10Q9NQV6 1147 aa41■■■■■ 4.15
SSSCA1-205ENST00000527920 WDR66Q8TBY9 1149 aa40.99■■■■■ 4.15
SSSCA1-205ENST00000527920 GNL3LQ9NVN8 582 aaKnown RBP40.99■■■■■ 4.15
SSSCA1-205ENST00000527920 ITPRIPQ8IWB1 547 aa40.98■■■■■ 4.15
SSSCA1-205ENST00000527920 MAST3O60307 1309 aa40.97■■■■■ 4.15
SSSCA1-205ENST00000527920 PNMA6EA0A0J9YXQ4 647 aa40.97■■■■■ 4.15
SSSCA1-205ENST00000527920 SEMA3EO15041 775 aa40.97■■■■■ 4.15
SSSCA1-205ENST00000527920 SLC10A3P09131 477 aa40.97■■■■■ 4.15
SSSCA1-205ENST00000527920 CRKP46108 304 aa40.97■■■■■ 4.15
SSSCA1-205ENST00000527920 GRIK5Q16478 980 aa40.97■■■■■ 4.15
SSSCA1-205ENST00000527920 SPDYE2Q495Y8 402 aa40.97■■■■■ 4.15
SSSCA1-205ENST00000527920 AKAP2Q9Y2D5 859 aa40.97■■■■■ 4.15
SSSCA1-205ENST00000527920 CLRN2A0PK11 232 aa40.96■■■■■ 4.15
SSSCA1-205ENST00000527920 CA12O43570 354 aa40.96■■■■■ 4.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms