RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 PLIN1O60240 522 aa25.44■■□□□ 1.66
HDAC2-207ENST00000520170 LMBR1LQ6UX01 489 aa25.44■■□□□ 1.66
HDAC2-207ENST00000520170 C15orf52Q6ZUT6 534 aaKnown RBP25.44■■□□□ 1.66
HDAC2-207ENST00000520170 ZNF804AQ7Z570 1209 aa25.44■■□□□ 1.66
HDAC2-207ENST00000520170 HPS5Q9UPZ3 1129 aa25.44■■□□□ 1.66
HDAC2-207ENST00000520170 PCDHAC2Q9Y5I4 1007 aa25.44■■□□□ 1.66
HDAC2-207ENST00000520170 GPR25O00155 361 aa25.43■■□□□ 1.66
HDAC2-207ENST00000520170 PKN2Q16513 984 aaKnown RBP25.43■■□□□ 1.66
HDAC2-207ENST00000520170 TAF7LQ5H9L4 462 aa25.43■■□□□ 1.66
HDAC2-207ENST00000520170 LDLRAD1Q5T700 205 aa25.43■■□□□ 1.66
HDAC2-207ENST00000520170 ZNF594Q96JF6 807 aaPredicted RBP25.43■■□□□ 1.66
HDAC2-207ENST00000520170 JAG2Q9Y219 1238 aa25.43■■□□□ 1.66
HDAC2-207ENST00000520170 CCDC57Q2TAC2 916 aa25.42■■□□□ 1.66
HDAC2-207ENST00000520170 EPHA10Q5JZY3 1008 aa25.42■■□□□ 1.66
HDAC2-207ENST00000520170 SPRYD7Q5W111 196 aa25.42■■□□□ 1.66
HDAC2-207ENST00000520170 IL1R1P14778 569 aa25.41■■□□□ 1.66
HDAC2-207ENST00000520170 CFAP100Q494V2 611 aa25.41■■□□□ 1.66
HDAC2-207ENST00000520170 LDHAL6AQ6ZMR3 332 aa25.41■■□□□ 1.66
HDAC2-207ENST00000520170 MTMR14Q8NCE2 650 aa25.41■■□□□ 1.66
HDAC2-207ENST00000520170 SLC10A4Q96EP9 437 aa25.41■■□□□ 1.66
HDAC2-207ENST00000520170 COL1A1P02452 1464 aaPredicted RBP25.4■■□□□ 1.66
HDAC2-207ENST00000520170 CLRN2A0PK11 232 aa25.4■■□□□ 1.66
HDAC2-207ENST00000520170 GRM8O00222 908 aa25.4■■□□□ 1.66
HDAC2-207ENST00000520170 MYO1BO43795 1136 aa25.4■■□□□ 1.66
HDAC2-207ENST00000520170 R3HDMLQ9H3Y0 253 aa25.4■■□□□ 1.66
HDAC2-207ENST00000520170 SPINK5Q9NQ38 1064 aaPredicted RBP25.4■■□□□ 1.66
HDAC2-207ENST00000520170 CNNM1Q9NRU3 951 aa25.4■■□□□ 1.66
HDAC2-207ENST00000520170 PRMT6Q96LA8 375 aaPredicted RBP25.39■■□□□ 1.66
HDAC2-207ENST00000520170 C9orf78Q9NZ63 289 aaPredicted RBP25.39■■□□□ 1.66
HDAC2-207ENST00000520170 ANP32CO43423 234 aa25.38■■□□□ 1.65
HDAC2-207ENST00000520170 PPP1R12BO60237 982 aaPredicted RBP25.38■■□□□ 1.65
HDAC2-207ENST00000520170 RBM5P52756 815 aaKnown RBP eCLIP25.38■■□□□ 1.65
HDAC2-207ENST00000520170 NOM1Q5C9Z4 860 aaKnown RBP25.38■■□□□ 1.65
HDAC2-207ENST00000520170 CLMNQ96JQ2 1002 aa25.38■■□□□ 1.65
HDAC2-207ENST00000520170 VEZTQ9HBM0 779 aa25.38■■□□□ 1.65
HDAC2-207ENST00000520170 SPDYE2BA6NHP3 402 aa25.37■■□□□ 1.65
HDAC2-207ENST00000520170 FKTNO75072 461 aa25.37■■□□□ 1.65
HDAC2-207ENST00000520170 SPDYE6P0CI01 402 aa25.37■■□□□ 1.65
HDAC2-207ENST00000520170 FKBP1AP62942 108 aaKnown RBP25.37■■□□□ 1.65
HDAC2-207ENST00000520170 SLC4A10Q6U841 1118 aa25.37■■□□□ 1.65
HDAC2-207ENST00000520170 PPP2R3BQ9Y5P8 575 aa25.37■■□□□ 1.65
HDAC2-207ENST00000520170 AOX1Q06278 1338 aa25.37■■□□□ 1.65
HDAC2-207ENST00000520170 SUPT20HL1Q3ZLR7 823 aa25.36■■□□□ 1.65
HDAC2-207ENST00000520170 SSC5DA1L4H1 1573 aa25.35■■□□□ 1.65
HDAC2-207ENST00000520170 MANSC4A6NHS7 340 aaPredicted RBP25.35■■□□□ 1.65
HDAC2-207ENST00000520170 MAP3K11Q16584 847 aa25.35■■□□□ 1.65
HDAC2-207ENST00000520170 NBPF12Q5TAG4 269 aaPredicted RBP25.35■■□□□ 1.65
HDAC2-207ENST00000520170 FBXO46Q6PJ61 603 aaPredicted RBP25.35■■□□□ 1.65
HDAC2-207ENST00000520170 CFHR5Q9BXR6 569 aa25.35■■□□□ 1.65
HDAC2-207ENST00000520170 ALDH1A1P00352 501 aa25.34■■□□□ 1.65
HDAC2-207ENST00000520170 WNK4Q96J92 1243 aa25.34■■□□□ 1.65
HDAC2-207ENST00000520170 ALDH1L1O75891 902 aa25.33■■□□□ 1.65
HDAC2-207ENST00000520170 INHBEP58166 350 aa25.33■■□□□ 1.65
HDAC2-207ENST00000520170 IFNL1Q8IU54 200 aa25.33■■□□□ 1.65
HDAC2-207ENST00000520170 SRCIN1Q9C0H9 1055 aa25.33■■□□□ 1.65
HDAC2-207ENST00000520170 ZBTB48P10074 688 aaPredicted RBP25.32■■□□□ 1.64
HDAC2-207ENST00000520170 GYG1P46976 350 aa25.32■■□□□ 1.64
HDAC2-207ENST00000520170 RASA3Q14644 834 aa25.32■■□□□ 1.64
HDAC2-207ENST00000520170 HIBADHP31937 336 aaKnown RBP25.31■■□□□ 1.64
HDAC2-207ENST00000520170 IREB2P48200 963 aaKnown RBP25.31■■□□□ 1.64
HDAC2-207ENST00000520170 UBE4AQ14139 1066 aa25.31■■□□□ 1.64
HDAC2-207ENST00000520170 MFSD14BQ5SR56 506 aa25.31■■□□□ 1.64
HDAC2-207ENST00000520170 FAM9BQ8IZU0 186 aa25.31■■□□□ 1.64
HDAC2-207ENST00000520170 TDRD7Q8NHU6 1098 aaKnown RBP25.31■■□□□ 1.64
HDAC2-207ENST00000520170 SUCLG2Q96I99 432 aa25.31■■□□□ 1.64
HDAC2-207ENST00000520170 PUS3Q9BZE2 481 aaKnown RBP25.31■■□□□ 1.64
HDAC2-207ENST00000520170 TTF2Q9UNY4 1162 aaKnown RBP25.31■■□□□ 1.64
HDAC2-207ENST00000520170 FAM205AQ6ZU69 1335 aa25.31■■□□□ 1.64
HDAC2-207ENST00000520170 USP2O75604 605 aaPredicted RBP25.3■■□□□ 1.64
HDAC2-207ENST00000520170 LAMB1P07942 1786 aa25.3■■□□□ 1.64
HDAC2-207ENST00000520170 IGF2BP3O00425 579 aaKnown RBP eCLIP25.29■■□□□ 1.64
HDAC2-207ENST00000520170 FAM84BQ96KN1 310 aaPredicted RBP25.29■■□□□ 1.64
HDAC2-207ENST00000520170 TDRD3Q9H7E2 651 aaKnown RBP25.29■■□□□ 1.64
HDAC2-207ENST00000520170 ZNF70Q9UC06 446 aaPredicted RBP25.29■■□□□ 1.64
HDAC2-207ENST00000520170 UNCXA6NJT0 531 aa25.28■■□□□ 1.64
HDAC2-207ENST00000520170 KAZALD1Q96I82 304 aa25.28■■□□□ 1.64
HDAC2-207ENST00000520170 NBPF7P0C2Y1 421 aaPredicted RBP25.27■■□□□ 1.64
HDAC2-207ENST00000520170 GJA5P36382 358 aa25.27■■□□□ 1.64
HDAC2-207ENST00000520170 TNFAIP1Q13829 316 aa25.27■■□□□ 1.64
HDAC2-207ENST00000520170 SPDYE2Q495Y8 402 aa25.27■■□□□ 1.64
HDAC2-207ENST00000520170 ANKRD13AQ8IZ07 590 aa25.27■■□□□ 1.64
HDAC2-207ENST00000520170 SERPINA10Q9UK55 444 aa25.27■■□□□ 1.64
HDAC2-207ENST00000520170 TRIM17Q9Y577 477 aa25.27■■□□□ 1.64
HDAC2-207ENST00000520170 OTOFQ9HC10 1997 aa25.27■■□□□ 1.64
HDAC2-207ENST00000520170 RIPOR2Q9Y4F9 1068 aa25.26■■□□□ 1.63
HDAC2-207ENST00000520170 ARAP2Q8WZ64 1704 aa25.26■■□□□ 1.63
HDAC2-207ENST00000520170 OTUD7BQ6GQQ9 843 aa25.25■■□□□ 1.63
HDAC2-207ENST00000520170 DZIP1LQ8IYY4 767 aaKnown RBP25.25■■□□□ 1.63
HDAC2-207ENST00000520170 ELP3Q9H9T3 547 aa25.25■■□□□ 1.63
HDAC2-207ENST00000520170 IQSEC3Q9UPP2 1182 aaPredicted RBP25.25■■□□□ 1.63
HDAC2-207ENST00000520170 HTTP42858 3142 aa25.24■■□□□ 1.63
HDAC2-207ENST00000520170 MROH5Q6ZUA9 1318 aa25.24■■□□□ 1.63
HDAC2-207ENST00000520170 TCP10L2B9ZVM9 353 aa25.24■■□□□ 1.63
HDAC2-207ENST00000520170 VPS37DQ86XT2 251 aa25.24■■□□□ 1.63
HDAC2-207ENST00000520170 BICC1Q9H694 974 aaKnown RBP25.24■■□□□ 1.63
HDAC2-207ENST00000520170 CENPFP49454 3210 aa25.23■■□□□ 1.63
HDAC2-207ENST00000520170 CRKP46108 304 aa25.23■■□□□ 1.63
HDAC2-207ENST00000520170 CHAF1AQ13111 956 aaPredicted RBP25.23■■□□□ 1.63
HDAC2-207ENST00000520170 CRHR2Q13324 411 aa25.23■■□□□ 1.63
HDAC2-207ENST00000520170 PRPF38BQ5VTL8 546 aaKnown RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms