RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 ATF7IPQ6VMQ6 1270 aa16.35■□□□□ 0.21
CDK7-213ENST00000515391 SULF1Q8IWU6 871 aa16.35■□□□□ 0.21
CDK7-213ENST00000515391 OGFOD1Q8N543 542 aa16.35■□□□□ 0.21
CDK7-213ENST00000515391 VGLL2Q8N8G2 317 aa16.35■□□□□ 0.21
CDK7-213ENST00000515391 SIL1Q9H173 461 aa16.35■□□□□ 0.21
CDK7-213ENST00000515391 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
CDK7-213ENST00000515391 PCDHAC2Q9Y5I4 1007 aa16.35■□□□□ 0.21
CDK7-213ENST00000515391 WDR33Q9C0J8 1336 aaKnown RBP16.35■□□□□ 0.21
CDK7-213ENST00000515391 EYA2O00167 538 aa16.34■□□□□ 0.21
CDK7-213ENST00000515391 PDE8BO95263 885 aa16.34■□□□□ 0.21
CDK7-213ENST00000515391 SAPCD2Q86UD0 394 aa16.34■□□□□ 0.21
CDK7-213ENST00000515391 TDRD7Q8NHU6 1098 aaKnown RBP16.34■□□□□ 0.21
CDK7-213ENST00000515391 CAPNS2Q96L46 248 aa16.34■□□□□ 0.21
CDK7-213ENST00000515391 PA2G4Q9UQ80 394 aaKnown RBP16.34■□□□□ 0.21
CDK7-213ENST00000515391 WNT10BO00744 389 aa16.33■□□□□ 0.2
CDK7-213ENST00000515391 PRAMEF18Q5VWM3 479 aa16.33■□□□□ 0.2
CDK7-213ENST00000515391 ATG9AQ7Z3C6 839 aa16.33■□□□□ 0.2
CDK7-213ENST00000515391 ZKSCAN2Q63HK3 967 aa16.32■□□□□ 0.2
CDK7-213ENST00000515391 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
CDK7-213ENST00000515391 TMEM57Q8N5G2 664 aa16.32■□□□□ 0.2
CDK7-213ENST00000515391 CDCA5Q96FF9 252 aa16.32■□□□□ 0.2
CDK7-213ENST00000515391 HDAC9Q9UKV0 1011 aa16.32■□□□□ 0.2
CDK7-213ENST00000515391 AOC2O75106 756 aa16.31■□□□□ 0.2
CDK7-213ENST00000515391 GNAI3P08754 354 aa16.31■□□□□ 0.2
CDK7-213ENST00000515391 BCAMP50895 628 aa16.31■□□□□ 0.2
CDK7-213ENST00000515391 ZBED3Q96IU2 234 aaPredicted RBP16.31■□□□□ 0.2
CDK7-213ENST00000515391 GBA2Q9HCG7 927 aaPredicted RBP16.31■□□□□ 0.2
CDK7-213ENST00000515391 AOX1Q06278 1338 aa16.3■□□□□ 0.2
CDK7-213ENST00000515391 FAM205AQ6ZU69 1335 aa16.3■□□□□ 0.2
CDK7-213ENST00000515391 FGFR2P21802 821 aa16.3■□□□□ 0.2
CDK7-213ENST00000515391 HUNKP57058 714 aa16.3■□□□□ 0.2
CDK7-213ENST00000515391 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
CDK7-213ENST00000515391 GRIK5Q16478 980 aa16.3■□□□□ 0.2
CDK7-213ENST00000515391 VPS37DQ86XT2 251 aa16.3■□□□□ 0.2
CDK7-213ENST00000515391 PITPNM2Q9BZ72 1349 aa16.29■□□□□ 0.2
CDK7-213ENST00000515391 FOXN1O15353 648 aa16.29■□□□□ 0.2
CDK7-213ENST00000515391 ECE1P42892 770 aa16.29■□□□□ 0.2
CDK7-213ENST00000515391 FKBP1AP62942 108 aaKnown RBP16.29■□□□□ 0.2
CDK7-213ENST00000515391 PUM3Q15397 648 aaKnown RBP16.29■□□□□ 0.2
CDK7-213ENST00000515391 DLGAP5Q15398 846 aa16.29■□□□□ 0.2
CDK7-213ENST00000515391 CAVIN4Q5BKX8 364 aa16.29■□□□□ 0.2
CDK7-213ENST00000515391 MFSD14BQ5SR56 506 aa16.29■□□□□ 0.2
CDK7-213ENST00000515391 COL13A1Q5TAT6 717 aaPredicted RBP16.29■□□□□ 0.2
CDK7-213ENST00000515391 C2orf69Q8N8R5 385 aa16.29■□□□□ 0.2
CDK7-213ENST00000515391 HDAC5Q9UQL6 1122 aa16.29■□□□□ 0.2
CDK7-213ENST00000515391 IFIT1P09914 478 aaKnown RBP16.28■□□□□ 0.2
CDK7-213ENST00000515391 RLBP1P12271 317 aa16.28■□□□□ 0.2
CDK7-213ENST00000515391 CFAP100Q494V2 611 aa16.28■□□□□ 0.2
CDK7-213ENST00000515391 MOB2Q70IA6 237 aa16.28■□□□□ 0.2
CDK7-213ENST00000515391 PRMT6Q96LA8 375 aaPredicted RBP16.28■□□□□ 0.2
CDK7-213ENST00000515391 CLRN2A0PK11 232 aa16.27■□□□□ 0.2
CDK7-213ENST00000515391 SRGAP3O43295 1099 aa16.27■□□□□ 0.2
CDK7-213ENST00000515391 FRAT2O75474 233 aaPredicted RBP16.27■□□□□ 0.2
CDK7-213ENST00000515391 CIAO1O76071 339 aa16.27■□□□□ 0.2
CDK7-213ENST00000515391 SLC5A1P13866 664 aa16.27■□□□□ 0.2
CDK7-213ENST00000515391 RBM5P52756 815 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDK7-213ENST00000515391 LPIN2Q92539 896 aa16.27■□□□□ 0.2
CDK7-213ENST00000515391 ZIC5Q96T25 663 aa16.27■□□□□ 0.2
CDK7-213ENST00000515391 COPRSQ9NQ92 184 aa16.27■□□□□ 0.2
CDK7-213ENST00000515391 WBP1LQ9NX94 342 aa16.27■□□□□ 0.2
CDK7-213ENST00000515391 CEP126Q9P2H0 1117 aa16.27■□□□□ 0.2
CDK7-213ENST00000515391 TTF2Q9UNY4 1162 aaKnown RBP16.27■□□□□ 0.2
CDK7-213ENST00000515391 PNMA6EA0A0J9YXQ4 647 aa16.26■□□□□ 0.19
CDK7-213ENST00000515391 GNAI2P04899 355 aa16.26■□□□□ 0.19
CDK7-213ENST00000515391 IL15P40933 162 aaPredicted RBP16.26■□□□□ 0.19
CDK7-213ENST00000515391 MMP14P50281 582 aa16.26■□□□□ 0.19
CDK7-213ENST00000515391 ATP2B3Q16720 1220 aa16.26■□□□□ 0.19
CDK7-213ENST00000515391 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
CDK7-213ENST00000515391 HHIPL1Q96JK4 782 aa16.26■□□□□ 0.19
CDK7-213ENST00000515391 C1orf115Q9H7X2 142 aa16.26■□□□□ 0.19
CDK7-213ENST00000515391 FBXO3Q9UK99 471 aa16.26■□□□□ 0.19
CDK7-213ENST00000515391 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
CDK7-213ENST00000515391 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
CDK7-213ENST00000515391 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
CDK7-213ENST00000515391 MTX1Q13505 466 aa16.25■□□□□ 0.19
CDK7-213ENST00000515391 RGMBQ6NW40 437 aa16.25■□□□□ 0.19
CDK7-213ENST00000515391 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
CDK7-213ENST00000515391 MTMR14Q8NCE2 650 aa16.25■□□□□ 0.19
CDK7-213ENST00000515391 AIDAQ96BJ3 306 aa16.25■□□□□ 0.19
CDK7-213ENST00000515391 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.25■□□□□ 0.19
CDK7-213ENST00000515391 THSD7BQ9C0I4 1608 aa16.24■□□□□ 0.19
CDK7-213ENST00000515391 UBE2Q2LH0YL09 131 aa16.24■□□□□ 0.19
CDK7-213ENST00000515391 ATXN8OSP0DMR3 200 aa16.24■□□□□ 0.19
CDK7-213ENST00000515391 ADORA1P30542 326 aa16.24■□□□□ 0.19
CDK7-213ENST00000515391 PRKG1Q13976 671 aa16.24■□□□□ 0.19
CDK7-213ENST00000515391 APOBEC3FQ8IUX4 373 aaKnown RBP16.24■□□□□ 0.19
CDK7-213ENST00000515391 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
CDK7-213ENST00000515391 VEZTQ9HBM0 779 aa16.24■□□□□ 0.19
CDK7-213ENST00000515391 FZD1Q9UP38 647 aa16.24■□□□□ 0.19
CDK7-213ENST00000515391 ARAP2Q8WZ64 1704 aa16.23■□□□□ 0.19
CDK7-213ENST00000515391 FAM155AB1AL88 458 aaPredicted RBP16.23■□□□□ 0.19
CDK7-213ENST00000515391 CRKP46108 304 aa16.23■□□□□ 0.19
CDK7-213ENST00000515391 ZNF157P51786 506 aaPredicted RBP16.23■□□□□ 0.19
CDK7-213ENST00000515391 TIMM10P62072 90 aa16.23■□□□□ 0.19
CDK7-213ENST00000515391 MAP2K1Q02750 393 aaPredicted RBP16.23■□□□□ 0.19
CDK7-213ENST00000515391 TFCP2Q12800 502 aa16.23■□□□□ 0.19
CDK7-213ENST00000515391 TTLL12Q14166 644 aaPredicted RBP16.23■□□□□ 0.19
CDK7-213ENST00000515391 PANK1Q8TE04 598 aa16.23■□□□□ 0.19
CDK7-213ENST00000515391 TDRD3Q9H7E2 651 aaKnown RBP16.23■□□□□ 0.19
CDK7-213ENST00000515391 ECM29Q5VYK3 1845 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms